RNA–Protein interactions for RNA: ENST00000548977.5

NR4A1-211, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2

Gene NR4A1, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-211ENST00000548977 NISCHQ9Y2I1 1504 aa21.88■■□□□ 1.09
NR4A1-211ENST00000548977 CCDC180Q9P1Z9 1646 aa19.35■□□□□ 0.69
NR4A1-211ENST00000548977 ABCC9O60706 1549 aa18.99■□□□□ 0.63
NR4A1-211ENST00000548977 DCAF8L2P0C7V8 631 aa18.5■□□□□ 0.55
NR4A1-211ENST00000548977 RB1CC1Q8TDY2 1594 aa18.25■□□□□ 0.51
NR4A1-211ENST00000548977 NACADO15069 1562 aa18.24■□□□□ 0.51
NR4A1-211ENST00000548977 ZCCHC6Q5VYS8 1495 aaKnown RBP18.23■□□□□ 0.51
NR4A1-211ENST00000548977 MYO15BQ96JP2 1530 aa18.1■□□□□ 0.49
NR4A1-211ENST00000548977 DCAF1Q9Y4B6 1507 aa18.07■□□□□ 0.48
NR4A1-211ENST00000548977 PABPN1Q86U42 306 aaKnown RBP eCLIP17.82■□□□□ 0.44
NR4A1-211ENST00000548977 SCRIBQ14160 1630 aa17.76■□□□□ 0.43
NR4A1-211ENST00000548977 UNC13AQ9UPW8 1703 aa17.68■□□□□ 0.42
NR4A1-211ENST00000548977 BICRAQ9NZM4 1560 aa17.6■□□□□ 0.41
NR4A1-211ENST00000548977 SHROOM4Q9ULL8 1493 aa17.5■□□□□ 0.39
NR4A1-211ENST00000548977 DNAJC5BQ9UF47 199 aa17.3■□□□□ 0.36
NR4A1-211ENST00000548977 EIF4G1Q04637 1599 aaKnown RBP17.19■□□□□ 0.34
NR4A1-211ENST00000548977 CC2D2AQ9P2K1 1620 aa17.1■□□□□ 0.33
NR4A1-211ENST00000548977 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
NR4A1-211ENST00000548977 BAZ1AQ9NRL2 1556 aaPredicted RBP16.98■□□□□ 0.31
NR4A1-211ENST00000548977 SMARCA4P51532 1647 aa16.94■□□□□ 0.3
NR4A1-211ENST00000548977 MROH2BQ7Z745 1585 aa16.87■□□□□ 0.29
NR4A1-211ENST00000548977 ATAD2BQ9ULI0 1458 aa16.86■□□□□ 0.29
NR4A1-211ENST00000548977 SMARCA2P51531 1590 aa16.85■□□□□ 0.29
NR4A1-211ENST00000548977 NCAPD3P42695 1498 aa16.83■□□□□ 0.28
NR4A1-211ENST00000548977 BAZ1BQ9UIG0 1483 aaKnown RBP16.78■□□□□ 0.28
NR4A1-211ENST00000548977 RSF1Q96T23 1441 aaPredicted RBP16.73■□□□□ 0.27
NR4A1-211ENST00000548977 HMGXB3Q12766 1538 aa16.73■□□□□ 0.27
NR4A1-211ENST00000548977 PEG3Q9GZU2 1588 aa16.72■□□□□ 0.27
NR4A1-211ENST00000548977 WIZO95785 1651 aa16.67■□□□□ 0.26
NR4A1-211ENST00000548977 SUPT5HO00267 1087 aaKnown RBP16.56■□□□□ 0.24
NR4A1-211ENST00000548977 TOP2AP11388 1531 aaKnown RBP16.52■□□□□ 0.24
NR4A1-211ENST00000548977 ERCC6Q03468 1493 aa16.42■□□□□ 0.22
NR4A1-211ENST00000548977 NESP48681 1621 aa16.41■□□□□ 0.22
NR4A1-211ENST00000548977 CADPSQ9ULU8 1353 aa16.39■□□□□ 0.21
NR4A1-211ENST00000548977 LAMC3Q9Y6N6 1575 aa16.36■□□□□ 0.21
NR4A1-211ENST00000548977 CCDC88BA6NC98 1476 aa16.35■□□□□ 0.21
NR4A1-211ENST00000548977 PDS5BQ9NTI5 1447 aa16.34■□□□□ 0.21
NR4A1-211ENST00000548977 CFTRP13569 1480 aa16.27■□□□□ 0.19
NR4A1-211ENST00000548977 FANCD2Q9BXW9 1451 aa16.2■□□□□ 0.18
NR4A1-211ENST00000548977 CEP164Q9UPV0 1460 aa16.18■□□□□ 0.18
NR4A1-211ENST00000548977 KIF21AQ7Z4S6 1674 aa16.14■□□□□ 0.18
NR4A1-211ENST00000548977 MRC2Q9UBG0 1479 aa16.12■□□□□ 0.17
NR4A1-211ENST00000548977 CUX2O14529 1486 aa16.11■□□□□ 0.17
NR4A1-211ENST00000548977 THOC2Q8NI27 1593 aaKnown RBP16.07■□□□□ 0.16
NR4A1-211ENST00000548977 PRDM2Q13029 1718 aa16.04■□□□□ 0.16
NR4A1-211ENST00000548977 WDR62O43379 1518 aa16■□□□□ 0.15
NR4A1-211ENST00000548977 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
NR4A1-211ENST00000548977 ABCC8Q09428 1581 aa15.96■□□□□ 0.15
NR4A1-211ENST00000548977 TOPBP1Q92547 1522 aa15.93■□□□□ 0.14
NR4A1-211ENST00000548977 DNMBPQ6XZF7 1577 aa15.9■□□□□ 0.14
NR4A1-211ENST00000548977 IFT140Q96RY7 1462 aa15.83■□□□□ 0.12
NR4A1-211ENST00000548977 WRNQ14191 1432 aaPredicted RBP eCLIP15.82■□□□□ 0.12
NR4A1-211ENST00000548977 CUX1P39880 1505 aa15.82■□□□□ 0.12
NR4A1-211ENST00000548977 SOGA1O94964 1423 aa15.8■□□□□ 0.12
NR4A1-211ENST00000548977 POLA1P09884 1462 aaPredicted RBP15.79■□□□□ 0.12
NR4A1-211ENST00000548977 FGD5Q6ZNL6 1462 aa15.79■□□□□ 0.12
NR4A1-211ENST00000548977 RAD54L2Q9Y4B4 1467 aa15.75■□□□□ 0.11
NR4A1-211ENST00000548977 ZNF608Q9ULD9 1512 aaPredicted RBP15.73■□□□□ 0.11
NR4A1-211ENST00000548977 DNAJC5Q9H3Z4 198 aa15.71■□□□□ 0.11
NR4A1-211ENST00000548977 TDRD9Q8NDG6 1382 aaKnown RBP15.71■□□□□ 0.11
NR4A1-211ENST00000548977 TOP2BQ02880 1626 aa15.69■□□□□ 0.1
NR4A1-211ENST00000548977 AQRO60306 1485 aaKnown RBP eCLIP15.69■□□□□ 0.1
NR4A1-211ENST00000548977 SYNJ1O43426 1573 aa15.69■□□□□ 0.1
NR4A1-211ENST00000548977 TARBP1Q13395 1621 aaKnown RBP15.67■□□□□ 0.1
NR4A1-211ENST00000548977 BIVM-ERCC5R4GMW8 1640 aa15.65■□□□□ 0.1
NR4A1-211ENST00000548977 EIF4G3O43432 1585 aaKnown RBP15.63■□□□□ 0.09
NR4A1-211ENST00000548977 TRIM41Q8WV44 630 aa15.63■□□□□ 0.09
NR4A1-211ENST00000548977 FBLN2P98095 1184 aa15.62■□□□□ 0.09
NR4A1-211ENST00000548977 ABCA10Q8WWZ4 1543 aa15.62■□□□□ 0.09
NR4A1-211ENST00000548977 GAPVD1Q14C86 1478 aa15.59■□□□□ 0.09
NR4A1-211ENST00000548977 GRIN2BQ13224 1484 aa15.58■□□□□ 0.08
NR4A1-211ENST00000548977 WDR97A6NE52 1622 aa15.57■□□□□ 0.08
NR4A1-211ENST00000548977 OSCARQ8IYS5 282 aa15.57■□□□□ 0.08
NR4A1-211ENST00000548977 CHMP7Q8WUX9 453 aaPredicted RBP15.55■□□□□ 0.08
NR4A1-211ENST00000548977 SNAPC4Q5SXM2 1469 aa15.53■□□□□ 0.08
NR4A1-211ENST00000548977 KIF27Q86VH2 1401 aa15.51■□□□□ 0.07
NR4A1-211ENST00000548977 MAGI1Q96QZ7 1491 aaPredicted RBP15.51■□□□□ 0.07
NR4A1-211ENST00000548977 ABCA5Q8WWZ7 1642 aa15.49■□□□□ 0.07
NR4A1-211ENST00000548977 PBRM1Q86U86 1689 aa15.45■□□□□ 0.06
NR4A1-211ENST00000548977 SYNJ2O15056 1496 aa15.45■□□□□ 0.06
NR4A1-211ENST00000548977 ERICH3Q5RHP9 1530 aa15.43■□□□□ 0.06
NR4A1-211ENST00000548977 CHIC1Q5VXU3 224 aa15.42■□□□□ 0.06
NR4A1-211ENST00000548977 FHAD1B1AJZ9 1412 aa15.42■□□□□ 0.06
NR4A1-211ENST00000548977 IGF1RP08069 1367 aa15.39■□□□□ 0.05
NR4A1-211ENST00000548977 CHD1O14646 1710 aa15.39■□□□□ 0.05
NR4A1-211ENST00000548977 ADAMTS12P58397 1594 aa15.36■□□□□ 0.05
NR4A1-211ENST00000548977 GRIN2AQ12879 1464 aa15.35■□□□□ 0.05
NR4A1-211ENST00000548977 CARMIL1Q5VZK9 1371 aa15.35■□□□□ 0.05
NR4A1-211ENST00000548977 FAM9AQ8IZU1 332 aaPredicted RBP15.33■□□□□ 0.04
NR4A1-211ENST00000548977 RUSC2Q8N2Y8 1516 aa15.33■□□□□ 0.04
NR4A1-211ENST00000548977 CUL7Q14999 1698 aa15.29■□□□□ 0.04
NR4A1-211ENST00000548977 CSRNP3Q8WYN3 585 aa15.28■□□□□ 0.04
NR4A1-211ENST00000548977 NUP160Q12769 1436 aa15.26■□□□□ 0.03
NR4A1-211ENST00000548977 EEA1Q15075 1411 aa15.26■□□□□ 0.03
NR4A1-211ENST00000548977 RAPGEF2Q9Y4G8 1499 aa15.24■□□□□ 0.03
NR4A1-211ENST00000548977 CLASP1Q7Z460 1538 aa15.23■□□□□ 0.03
NR4A1-211ENST00000548977 CEP170Q5SW79 1584 aa15.23■□□□□ 0.03
NR4A1-211ENST00000548977 ARHGEF11O15085 1522 aa15.21■□□□□ 0.03
NR4A1-211ENST00000548977 JPH4Q96JJ6 628 aa15.2■□□□□ 0.02
NR4A1-211ENST00000548977 CYB5RLQ6IPT4 315 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms