RNA–Protein interactions for RNA: ENST00000394824.2

NR4A1-203, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NR4A1, Length 2,639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-203ENST00000394824 NISCHQ9Y2I1 1504 aa36.23■■■■□ 3.39
NR4A1-203ENST00000394824 SHROOM4Q9ULL8 1493 aa31.29■■■□□ 2.6
NR4A1-203ENST00000394824 SUPT5HO00267 1087 aaKnown RBP30.92■■■□□ 2.54
NR4A1-203ENST00000394824 ZCCHC6Q5VYS8 1495 aaKnown RBP30.76■■■□□ 2.51
NR4A1-203ENST00000394824 CCDC180Q9P1Z9 1646 aa30.55■■■□□ 2.48
NR4A1-203ENST00000394824 MYO15BQ96JP2 1530 aa30.35■■■□□ 2.45
NR4A1-203ENST00000394824 CHIC1Q5VXU3 224 aa30.31■■■□□ 2.44
NR4A1-203ENST00000394824 HRCP23327 699 aa30.27■■■□□ 2.44
NR4A1-203ENST00000394824 DCAF8L2P0C7V8 631 aa29.9■■■□□ 2.38
NR4A1-203ENST00000394824 PCGF6Q9BYE7 350 aa29.9■■■□□ 2.38
NR4A1-203ENST00000394824 DCAF1Q9Y4B6 1507 aa29.71■■■□□ 2.35
NR4A1-203ENST00000394824 PPARGC1BQ86YN6 1023 aaKnown RBP29.55■■■□□ 2.32
NR4A1-203ENST00000394824 LOC105371045A0A1W2PR82 267 aa29.43■■■□□ 2.3
NR4A1-203ENST00000394824 TRIM26Q12899 539 aaPredicted RBP29.22■■■□□ 2.27
NR4A1-203ENST00000394824 ABCC9O60706 1549 aa29.13■■■□□ 2.25
NR4A1-203ENST00000394824 RSF1Q96T23 1441 aaPredicted RBP28.87■■■□□ 2.21
NR4A1-203ENST00000394824 ZEB1P37275 1124 aaPredicted RBP28.81■■■□□ 2.2
NR4A1-203ENST00000394824 SCRIBQ14160 1630 aa28.76■■■□□ 2.19
NR4A1-203ENST00000394824 TRIM41Q8WV44 630 aa28.75■■■□□ 2.19
NR4A1-203ENST00000394824 RB1CC1Q8TDY2 1594 aa28.68■■■□□ 2.18
NR4A1-203ENST00000394824 FAM9AQ8IZU1 332 aaPredicted RBP28.55■■■□□ 2.16
NR4A1-203ENST00000394824 EHMT2Q96KQ7 1210 aa28.3■■■□□ 2.12
NR4A1-203ENST00000394824 PELP1Q8IZL8 1130 aaKnown RBP28.27■■■□□ 2.12
NR4A1-203ENST00000394824 CECR2Q9BXF3 1484 aa28.24■■■□□ 2.11
NR4A1-203ENST00000394824 SCAF1Q9H7N4 1312 aaKnown RBP28.22■■■□□ 2.11
NR4A1-203ENST00000394824 MROH2BQ7Z745 1585 aa28.2■■■□□ 2.11
NR4A1-203ENST00000394824 NACADO15069 1562 aa28.13■■■□□ 2.09
NR4A1-203ENST00000394824 WIZO95785 1651 aa28.09■■■□□ 2.09
NR4A1-203ENST00000394824 BAZ1AQ9NRL2 1556 aaPredicted RBP27.96■■■□□ 2.07
NR4A1-203ENST00000394824 EIF4G1Q04637 1599 aaKnown RBP27.94■■■□□ 2.06
NR4A1-203ENST00000394824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.94■■■□□ 2.06
NR4A1-203ENST00000394824 CCER1Q8TC90 406 aaPredicted RBP27.9■■■□□ 2.06
NR4A1-203ENST00000394824 ACIN1Q9UKV3 1341 aaKnown RBP27.78■■■□□ 2.04
NR4A1-203ENST00000394824 WRNQ14191 1432 aaPredicted RBP eCLIP27.73■■■□□ 2.03
NR4A1-203ENST00000394824 NEUROD1Q13562 356 aa27.69■■■□□ 2.02
NR4A1-203ENST00000394824 ABCC8Q09428 1581 aa27.66■■■□□ 2.02
NR4A1-203ENST00000394824 DIEXFQ68CQ4 756 aaKnown RBP27.65■■■□□ 2.02
NR4A1-203ENST00000394824 TOP2AP11388 1531 aaKnown RBP27.64■■■□□ 2.02
NR4A1-203ENST00000394824 CCDC88BA6NC98 1476 aa27.64■■■□□ 2.02
NR4A1-203ENST00000394824 CEP162Q5TB80 1403 aa27.62■■■□□ 2.01
NR4A1-203ENST00000394824 CENPBP07199 599 aaPredicted RBP27.54■■■□□ 2
NR4A1-203ENST00000394824 TTBK1Q5TCY1 1321 aaPredicted RBP27.54■■■□□ 2
NR4A1-203ENST00000394824 TNIKQ9UKE5 1360 aa27.53■■■□□ 2
NR4A1-203ENST00000394824 SMARCA2P51531 1590 aa27.52■■■□□ 2
NR4A1-203ENST00000394824 SMARCA4P51532 1647 aa27.5■■□□□ 1.99
NR4A1-203ENST00000394824 SOGA1O94964 1423 aa27.49■■□□□ 1.99
NR4A1-203ENST00000394824 GTF3C3Q9Y5Q9 886 aa27.47■■□□□ 1.99
NR4A1-203ENST00000394824 EEA1Q15075 1411 aa27.44■■□□□ 1.98
NR4A1-203ENST00000394824 CSRNP3Q8WYN3 585 aa27.37■■□□□ 1.97
NR4A1-203ENST00000394824 RUSC2Q8N2Y8 1516 aa27.33■■□□□ 1.97
NR4A1-203ENST00000394824 UBTFP17480 764 aaKnown RBP27.32■■□□□ 1.96
NR4A1-203ENST00000394824 ZNF316A6NFI3 1004 aaPredicted RBP27.31■■□□□ 1.96
NR4A1-203ENST00000394824 GOLGA3Q08378 1498 aa27.29■■□□□ 1.96
NR4A1-203ENST00000394824 UNC13AQ9UPW8 1703 aa27.2■■□□□ 1.95
NR4A1-203ENST00000394824 CEP164Q9UPV0 1460 aa27.07■■□□□ 1.92
NR4A1-203ENST00000394824 KIF21BO75037 1637 aa27.05■■□□□ 1.92
NR4A1-203ENST00000394824 HNRNPUL2Q1KMD3 747 aaKnown RBP27.03■■□□□ 1.92
NR4A1-203ENST00000394824 YTHDC1Q96MU7 727 aaKnown RBP27.03■■□□□ 1.92
NR4A1-203ENST00000394824 CLIP1P30622 1438 aa26.99■■□□□ 1.91
NR4A1-203ENST00000394824 MYT1Q01538 1121 aa26.99■■□□□ 1.91
NR4A1-203ENST00000394824 MIER1Q8N108 512 aa26.98■■□□□ 1.91
NR4A1-203ENST00000394824 SYNJ1O43426 1573 aa26.97■■□□□ 1.91
NR4A1-203ENST00000394824 VPS8Q8N3P4 1428 aa26.94■■□□□ 1.9
NR4A1-203ENST00000394824 PEG3Q9GZU2 1588 aa26.93■■□□□ 1.9
NR4A1-203ENST00000394824 BAZ1BQ9UIG0 1483 aaKnown RBP26.88■■□□□ 1.89
NR4A1-203ENST00000394824 APLP2Q06481 763 aa26.83■■□□□ 1.88
NR4A1-203ENST00000394824 BICRAQ9NZM4 1560 aa26.82■■□□□ 1.88
NR4A1-203ENST00000394824 RAPGEF2Q9Y4G8 1499 aa26.8■■□□□ 1.88
NR4A1-203ENST00000394824 PABPN1Q86U42 306 aaKnown RBP eCLIP26.78■■□□□ 1.88
NR4A1-203ENST00000394824 ATAD2BQ9ULI0 1458 aa26.66■■□□□ 1.86
NR4A1-203ENST00000394824 CLSPNQ9HAW4 1339 aa26.65■■□□□ 1.86
NR4A1-203ENST00000394824 RANGAP1P46060 587 aaPredicted RBP26.64■■□□□ 1.85
NR4A1-203ENST00000394824 DHX57Q6P158 1386 aaKnown RBP26.59■■□□□ 1.85
NR4A1-203ENST00000394824 TOP2BQ02880 1626 aa26.59■■□□□ 1.85
NR4A1-203ENST00000394824 ERICH3Q5RHP9 1530 aa26.52■■□□□ 1.84
NR4A1-203ENST00000394824 ARAP1Q96P48 1450 aa26.5■■□□□ 1.83
NR4A1-203ENST00000394824 BIVM-ERCC5R4GMW8 1640 aa26.48■■□□□ 1.83
NR4A1-203ENST00000394824 PRXQ9BXM0 1461 aa26.47■■□□□ 1.83
NR4A1-203ENST00000394824 KANK4Q5T7N3 995 aaPredicted RBP26.42■■□□□ 1.82
NR4A1-203ENST00000394824 RRBP1Q9P2E9 1410 aaKnown RBP26.4■■□□□ 1.82
NR4A1-203ENST00000394824 SUPT16HQ9Y5B9 1047 aaKnown RBP26.35■■□□□ 1.81
NR4A1-203ENST00000394824 CUX2O14529 1486 aa26.33■■□□□ 1.81
NR4A1-203ENST00000394824 CCNB3Q8WWL7 1395 aa26.25■■□□□ 1.79
NR4A1-203ENST00000394824 KIF27Q86VH2 1401 aa26.22■■□□□ 1.79
NR4A1-203ENST00000394824 CUX1P39880 1505 aa26.22■■□□□ 1.79
NR4A1-203ENST00000394824 ARHGAP35Q9NRY4 1499 aa26.18■■□□□ 1.78
NR4A1-203ENST00000394824 ITGAEP38570 1179 aa26.11■■□□□ 1.77
NR4A1-203ENST00000394824 RAB3GAP2Q9H2M9 1393 aa26.09■■□□□ 1.77
NR4A1-203ENST00000394824 MAPKBP1O60336 1514 aa26.08■■□□□ 1.77
NR4A1-203ENST00000394824 HMGXB3Q12766 1538 aa26.08■■□□□ 1.77
NR4A1-203ENST00000394824 TSHZ2Q9NRE2 1034 aa26.05■■□□□ 1.76
NR4A1-203ENST00000394824 NCAPD3P42695 1498 aa26.03■■□□□ 1.76
NR4A1-203ENST00000394824 KCNH8Q96L42 1107 aa26.01■■□□□ 1.75
NR4A1-203ENST00000394824 TIAM1Q13009 1591 aa26■■□□□ 1.75
NR4A1-203ENST00000394824 MAP3K1Q13233 1512 aa25.99■■□□□ 1.75
NR4A1-203ENST00000394824 CFTRP13569 1480 aa25.98■■□□□ 1.75
NR4A1-203ENST00000394824 SETD5Q9C0A6 1442 aa25.95■■□□□ 1.75
NR4A1-203ENST00000394824 LRRC9Q6ZRR7 1453 aa25.89■■□□□ 1.74
NR4A1-203ENST00000394824 WDR97A6NE52 1622 aa25.89■■□□□ 1.74
NR4A1-203ENST00000394824 IGF1RP08069 1367 aa25.89■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms