RNA–Protein interactions for RNA: ENST00000457279.5

LSP1-212, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 5

Gene LSP1, Length 887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-212ENST00000457279 NISCHQ9Y2I1 1504 aa40.26■■■■■ 4.04
LSP1-212ENST00000457279 CCDC180Q9P1Z9 1646 aa35.79■■■■□ 3.32
LSP1-212ENST00000457279 ABCC9O60706 1549 aa34.79■■■■□ 3.16
LSP1-212ENST00000457279 NACADO15069 1562 aa33.61■■■□□ 2.97
LSP1-212ENST00000457279 RB1CC1Q8TDY2 1594 aa33.59■■■□□ 2.97
LSP1-212ENST00000457279 ZCCHC6Q5VYS8 1495 aaKnown RBP33.57■■■□□ 2.97
LSP1-212ENST00000457279 MYO15BQ96JP2 1530 aa33.54■■■□□ 2.96
LSP1-212ENST00000457279 DCAF1Q9Y4B6 1507 aa33.41■■■□□ 2.94
LSP1-212ENST00000457279 DCAF8L2P0C7V8 631 aa33.38■■■□□ 2.93
LSP1-212ENST00000457279 UNC13AQ9UPW8 1703 aa32.82■■■□□ 2.84
LSP1-212ENST00000457279 BICRAQ9NZM4 1560 aa32.61■■■□□ 2.81
LSP1-212ENST00000457279 SCRIBQ14160 1630 aa32.53■■■□□ 2.8
LSP1-212ENST00000457279 PABPN1Q86U42 306 aaKnown RBP eCLIP32.49■■■□□ 2.79
LSP1-212ENST00000457279 SHROOM4Q9ULL8 1493 aa32.35■■■□□ 2.77
LSP1-212ENST00000457279 DNAJC5BQ9UF47 199 aa31.9■■■□□ 2.7
LSP1-212ENST00000457279 EIF4G1Q04637 1599 aaKnown RBP31.7■■■□□ 2.67
LSP1-212ENST00000457279 CC2D2AQ9P2K1 1620 aa31.53■■■□□ 2.64
LSP1-212ENST00000457279 CECR2Q9BXF3 1484 aa31.32■■■□□ 2.6
LSP1-212ENST00000457279 SMARCA4P51532 1647 aa31.2■■■□□ 2.59
LSP1-212ENST00000457279 BAZ1AQ9NRL2 1556 aaPredicted RBP31.19■■■□□ 2.58
LSP1-212ENST00000457279 NCAPD3P42695 1498 aa31.04■■■□□ 2.56
LSP1-212ENST00000457279 ATAD2BQ9ULI0 1458 aa31.02■■■□□ 2.56
LSP1-212ENST00000457279 SMARCA2P51531 1590 aa31■■■□□ 2.55
LSP1-212ENST00000457279 MROH2BQ7Z745 1585 aa31■■■□□ 2.55
LSP1-212ENST00000457279 PEG3Q9GZU2 1588 aa30.99■■■□□ 2.55
LSP1-212ENST00000457279 HMGXB3Q12766 1538 aa30.88■■■□□ 2.53
LSP1-212ENST00000457279 BAZ1BQ9UIG0 1483 aaKnown RBP30.73■■■□□ 2.51
LSP1-212ENST00000457279 RSF1Q96T23 1441 aaPredicted RBP30.7■■■□□ 2.5
LSP1-212ENST00000457279 WIZO95785 1651 aa30.64■■■□□ 2.5
LSP1-212ENST00000457279 TOP2AP11388 1531 aaKnown RBP30.37■■■□□ 2.45
LSP1-212ENST00000457279 LAMC3Q9Y6N6 1575 aa30.16■■■□□ 2.42
LSP1-212ENST00000457279 NESP48681 1621 aa30.16■■■□□ 2.42
LSP1-212ENST00000457279 CADPSQ9ULU8 1353 aa30.09■■■□□ 2.41
LSP1-212ENST00000457279 CCDC88BA6NC98 1476 aa29.99■■■□□ 2.39
LSP1-212ENST00000457279 CFTRP13569 1480 aa29.96■■■□□ 2.39
LSP1-212ENST00000457279 ERCC6Q03468 1493 aa29.96■■■□□ 2.39
LSP1-212ENST00000457279 PDS5BQ9NTI5 1447 aa29.94■■■□□ 2.38
LSP1-212ENST00000457279 SUPT5HO00267 1087 aaKnown RBP29.83■■■□□ 2.37
LSP1-212ENST00000457279 KIF21AQ7Z4S6 1674 aa29.82■■■□□ 2.36
LSP1-212ENST00000457279 THOC2Q8NI27 1593 aaKnown RBP29.74■■■□□ 2.35
LSP1-212ENST00000457279 CUX2O14529 1486 aa29.73■■■□□ 2.35
LSP1-212ENST00000457279 PRDM2Q13029 1718 aa29.71■■■□□ 2.35
LSP1-212ENST00000457279 FANCD2Q9BXW9 1451 aa29.71■■■□□ 2.35
LSP1-212ENST00000457279 CEP164Q9UPV0 1460 aa29.66■■■□□ 2.34
LSP1-212ENST00000457279 MRC2Q9UBG0 1479 aa29.61■■■□□ 2.33
LSP1-212ENST00000457279 WDR62O43379 1518 aa29.55■■■□□ 2.32
LSP1-212ENST00000457279 URB2Q14146 1524 aaKnown RBP29.43■■■□□ 2.3
LSP1-212ENST00000457279 ABCC8Q09428 1581 aa29.3■■■□□ 2.28
LSP1-212ENST00000457279 TOPBP1Q92547 1522 aa29.26■■■□□ 2.27
LSP1-212ENST00000457279 DNMBPQ6XZF7 1577 aa29.25■■■□□ 2.27
LSP1-212ENST00000457279 CUX1P39880 1505 aa29.08■■■□□ 2.25
LSP1-212ENST00000457279 IFT140Q96RY7 1462 aa29.07■■■□□ 2.24
LSP1-212ENST00000457279 POLA1P09884 1462 aaPredicted RBP29.03■■■□□ 2.24
LSP1-212ENST00000457279 TARBP1Q13395 1621 aaKnown RBP28.97■■■□□ 2.23
LSP1-212ENST00000457279 FGD5Q6ZNL6 1462 aa28.95■■■□□ 2.22
LSP1-212ENST00000457279 WRNQ14191 1432 aaPredicted RBP eCLIP28.91■■■□□ 2.22
LSP1-212ENST00000457279 ZNF608Q9ULD9 1512 aaPredicted RBP28.89■■■□□ 2.22
LSP1-212ENST00000457279 SOGA1O94964 1423 aa28.88■■■□□ 2.21
LSP1-212ENST00000457279 TOP2BQ02880 1626 aa28.87■■■□□ 2.21
LSP1-212ENST00000457279 BIVM-ERCC5R4GMW8 1640 aa28.87■■■□□ 2.21
LSP1-212ENST00000457279 RAD54L2Q9Y4B4 1467 aa28.85■■■□□ 2.21
LSP1-212ENST00000457279 SYNJ1O43426 1573 aa28.84■■■□□ 2.21
LSP1-212ENST00000457279 WDR97A6NE52 1622 aa28.79■■■□□ 2.2
LSP1-212ENST00000457279 EIF4G3O43432 1585 aaKnown RBP28.79■■■□□ 2.2
LSP1-212ENST00000457279 AQRO60306 1485 aaKnown RBP eCLIP28.73■■■□□ 2.19
LSP1-212ENST00000457279 ABCA10Q8WWZ4 1543 aa28.73■■■□□ 2.19
LSP1-212ENST00000457279 DNAJC5Q9H3Z4 198 aa28.69■■■□□ 2.18
LSP1-212ENST00000457279 TDRD9Q8NDG6 1382 aaKnown RBP28.68■■■□□ 2.18
LSP1-212ENST00000457279 ABCA5Q8WWZ7 1642 aa28.59■■■□□ 2.17
LSP1-212ENST00000457279 GRIN2BQ13224 1484 aa28.56■■■□□ 2.16
LSP1-212ENST00000457279 GAPVD1Q14C86 1478 aa28.56■■■□□ 2.16
LSP1-212ENST00000457279 MAGI1Q96QZ7 1491 aaPredicted RBP28.49■■■□□ 2.15
LSP1-212ENST00000457279 PBRM1Q86U86 1689 aa28.48■■■□□ 2.15
LSP1-212ENST00000457279 SNAPC4Q5SXM2 1469 aa28.46■■■□□ 2.15
LSP1-212ENST00000457279 OSCARQ8IYS5 282 aa28.46■■■□□ 2.15
LSP1-212ENST00000457279 CHD1O14646 1710 aa28.39■■■□□ 2.14
LSP1-212ENST00000457279 ERICH3Q5RHP9 1530 aa28.38■■■□□ 2.13
LSP1-212ENST00000457279 SYNJ2O15056 1496 aa28.37■■■□□ 2.13
LSP1-212ENST00000457279 KIF27Q86VH2 1401 aa28.3■■■□□ 2.12
LSP1-212ENST00000457279 ADAMTS12P58397 1594 aa28.28■■■□□ 2.12
LSP1-212ENST00000457279 CHMP7Q8WUX9 453 aaPredicted RBP28.28■■■□□ 2.12
LSP1-212ENST00000457279 FBLN2P98095 1184 aa28.26■■■□□ 2.11
LSP1-212ENST00000457279 FHAD1B1AJZ9 1412 aa28.26■■■□□ 2.11
LSP1-212ENST00000457279 TRIM41Q8WV44 630 aa28.22■■■□□ 2.11
LSP1-212ENST00000457279 IGF1RP08069 1367 aa28.21■■■□□ 2.11
LSP1-212ENST00000457279 GRIN2AQ12879 1464 aa28.19■■■□□ 2.1
LSP1-212ENST00000457279 CLASP1Q7Z460 1538 aa28.16■■■□□ 2.1
LSP1-212ENST00000457279 CUL7Q14999 1698 aa28.12■■■□□ 2.09
LSP1-212ENST00000457279 NUP160Q12769 1436 aa28.1■■■□□ 2.09
LSP1-212ENST00000457279 RUSC2Q8N2Y8 1516 aa28.05■■■□□ 2.08
LSP1-212ENST00000457279 CEP170Q5SW79 1584 aa28.03■■■□□ 2.08
LSP1-212ENST00000457279 ARHGEF11O15085 1522 aa28.01■■■□□ 2.07
LSP1-212ENST00000457279 CARMIL1Q5VZK9 1371 aa28■■■□□ 2.07
LSP1-212ENST00000457279 CHIC1Q5VXU3 224 aa28■■■□□ 2.07
LSP1-212ENST00000457279 RIMBP3CA6NJZ7 1639 aa27.99■■■□□ 2.07
LSP1-212ENST00000457279 RIMBP3BA6NNM3 1639 aa27.99■■■□□ 2.07
LSP1-212ENST00000457279 RIMBP3Q9UFD9 1639 aa27.99■■■□□ 2.07
LSP1-212ENST00000457279 SHROOM2Q13796 1616 aa27.89■■■□□ 2.06
LSP1-212ENST00000457279 EEA1Q15075 1411 aa27.86■■■□□ 2.05
LSP1-212ENST00000457279 RAPGEF2Q9Y4G8 1499 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms