RNA–Protein interactions for RNA: ENST00000593922.5

IRF3-207, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,494 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-207ENST00000593922 NISCHQ9Y2I1 1504 aa52.98■■■■■ 6.07
IRF3-207ENST00000593922 CCDC180Q9P1Z9 1646 aa47.01■■■■■ 5.12
IRF3-207ENST00000593922 ABCC9O60706 1549 aa45.38■■■■■ 4.85
IRF3-207ENST00000593922 ZCCHC6Q5VYS8 1495 aaKnown RBP44.29■■■■■ 4.68
IRF3-207ENST00000593922 NACADO15069 1562 aa43.99■■■■■ 4.63
IRF3-207ENST00000593922 RB1CC1Q8TDY2 1594 aa43.92■■■■■ 4.62
IRF3-207ENST00000593922 MYO15BQ96JP2 1530 aa43.91■■■■■ 4.62
IRF3-207ENST00000593922 DCAF1Q9Y4B6 1507 aa43.9■■■■■ 4.62
IRF3-207ENST00000593922 DCAF8L2P0C7V8 631 aa43.8■■■■■ 4.6
IRF3-207ENST00000593922 UNC13AQ9UPW8 1703 aa43.1■■■■■ 4.49
IRF3-207ENST00000593922 SCRIBQ14160 1630 aa42.86■■■■■ 4.45
IRF3-207ENST00000593922 BICRAQ9NZM4 1560 aa42.64■■■■■ 4.42
IRF3-207ENST00000593922 PABPN1Q86U42 306 aaKnown RBP eCLIP42.37■■■■■ 4.372e-7■■■■□ 22.6
IRF3-207ENST00000593922 SHROOM4Q9ULL8 1493 aa42.22■■■■■ 4.35
IRF3-207ENST00000593922 EIF4G1Q04637 1599 aaKnown RBP41.44■■■■■ 4.22
IRF3-207ENST00000593922 CECR2Q9BXF3 1484 aa41.19■■■■■ 4.18
IRF3-207ENST00000593922 CC2D2AQ9P2K1 1620 aa41.15■■■■■ 4.18
IRF3-207ENST00000593922 DNAJC5BQ9UF47 199 aa41.15■■■■■ 4.18
IRF3-207ENST00000593922 SMARCA4P51532 1647 aa41.07■■■■■ 4.17
IRF3-207ENST00000593922 BAZ1AQ9NRL2 1556 aaPredicted RBP41.05■■■■■ 4.16
IRF3-207ENST00000593922 MROH2BQ7Z745 1585 aa40.84■■■■■ 4.13
IRF3-207ENST00000593922 PEG3Q9GZU2 1588 aa40.68■■■■■ 4.1
IRF3-207ENST00000593922 SMARCA2P51531 1590 aa40.65■■■■■ 4.1
IRF3-207ENST00000593922 ATAD2BQ9ULI0 1458 aa40.64■■■■■ 4.1
IRF3-207ENST00000593922 NCAPD3P42695 1498 aa40.54■■■■■ 4.08
IRF3-207ENST00000593922 RSF1Q96T23 1441 aaPredicted RBP40.5■■■■■ 4.07
IRF3-207ENST00000593922 WIZO95785 1651 aa40.47■■■■■ 4.07
IRF3-207ENST00000593922 HMGXB3Q12766 1538 aa40.47■■■■■ 4.07
IRF3-207ENST00000593922 BAZ1BQ9UIG0 1483 aaKnown RBP40.33■■■■■ 4.05
IRF3-207ENST00000593922 TOP2AP11388 1531 aaKnown RBP40.06■■■■■ 4
IRF3-207ENST00000593922 SUPT5HO00267 1087 aaKnown RBP39.68■■■■□ 3.94
IRF3-207ENST00000593922 CCDC88BA6NC98 1476 aa39.51■■■■□ 3.92
IRF3-207ENST00000593922 LAMC3Q9Y6N6 1575 aa39.46■■■■□ 3.91
IRF3-207ENST00000593922 NESP48681 1621 aa39.45■■■■□ 3.91
IRF3-207ENST00000593922 CADPSQ9ULU8 1353 aa39.33■■■■□ 3.89
IRF3-207ENST00000593922 CFTRP13569 1480 aa39.27■■■■□ 3.88
IRF3-207ENST00000593922 PRDM2Q13029 1718 aa39.21■■■■□ 3.87
IRF3-207ENST00000593922 KIF21AQ7Z4S6 1674 aa39.1■■■■□ 3.85
IRF3-207ENST00000593922 PDS5BQ9NTI5 1447 aa39.07■■■■□ 3.84
IRF3-207ENST00000593922 ERCC6Q03468 1493 aa39.05■■■■□ 3.84
IRF3-207ENST00000593922 FANCD2Q9BXW9 1451 aa38.94■■■■□ 3.82
IRF3-207ENST00000593922 CEP164Q9UPV0 1460 aa38.86■■■■□ 3.81
IRF3-207ENST00000593922 THOC2Q8NI27 1593 aaKnown RBP38.86■■■■□ 3.81
IRF3-207ENST00000593922 MRC2Q9UBG0 1479 aa38.7■■■■□ 3.79
IRF3-207ENST00000593922 WDR62O43379 1518 aa38.62■■■■□ 3.77
IRF3-207ENST00000593922 URB2Q14146 1524 aaKnown RBP38.56■■■■□ 3.76
IRF3-207ENST00000593922 CUX2O14529 1486 aa38.52■■■■□ 3.76
IRF3-207ENST00000593922 DNMBPQ6XZF7 1577 aa38.42■■■■□ 3.74
IRF3-207ENST00000593922 TOPBP1Q92547 1522 aa38.4■■■■□ 3.74
IRF3-207ENST00000593922 ABCC8Q09428 1581 aa38.36■■■■□ 3.73
IRF3-207ENST00000593922 CUX1P39880 1505 aa38.31■■■■□ 3.72
IRF3-207ENST00000593922 WRNQ14191 1432 aaPredicted RBP eCLIP38.17■■■■□ 3.7
IRF3-207ENST00000593922 BIVM-ERCC5R4GMW8 1640 aa38.16■■■■□ 3.7
IRF3-207ENST00000593922 SYNJ1O43426 1573 aa38.15■■■■□ 3.7
IRF3-207ENST00000593922 TOP2BQ02880 1626 aa38.13■■■■□ 3.69
IRF3-207ENST00000593922 POLA1P09884 1462 aaPredicted RBP38.11■■■■□ 3.69
IRF3-207ENST00000593922 FGD5Q6ZNL6 1462 aa38.08■■■■□ 3.69
IRF3-207ENST00000593922 TARBP1Q13395 1621 aaKnown RBP38.01■■■■□ 3.67
IRF3-207ENST00000593922 IFT140Q96RY7 1462 aa38■■■■□ 3.67
IRF3-207ENST00000593922 WDR97A6NE52 1622 aa37.89■■■■□ 3.66
IRF3-207ENST00000593922 RAD54L2Q9Y4B4 1467 aa37.88■■■■□ 3.65
IRF3-207ENST00000593922 SOGA1O94964 1423 aa37.86■■■■□ 3.65
IRF3-207ENST00000593922 ZNF608Q9ULD9 1512 aaPredicted RBP37.81■■■■□ 3.64
IRF3-207ENST00000593922 EIF4G3O43432 1585 aaKnown RBP37.78■■■■□ 3.64
IRF3-207ENST00000593922 ABCA10Q8WWZ4 1543 aa37.73■■■■□ 3.63
IRF3-207ENST00000593922 ABCA5Q8WWZ7 1642 aa37.63■■■■□ 3.62
IRF3-207ENST00000593922 AQRO60306 1485 aaKnown RBP eCLIP37.6■■■■□ 3.612e-7■■■■■ 27
IRF3-207ENST00000593922 TDRD9Q8NDG6 1382 aaKnown RBP37.58■■■■□ 3.61
IRF3-207ENST00000593922 PBRM1Q86U86 1689 aa37.53■■■■□ 3.6
IRF3-207ENST00000593922 GAPVD1Q14C86 1478 aa37.49■■■■□ 3.59
IRF3-207ENST00000593922 TRIM41Q8WV44 630 aa37.45■■■■□ 3.59
IRF3-207ENST00000593922 GRIN2BQ13224 1484 aa37.41■■■■□ 3.58
IRF3-207ENST00000593922 CHIC1Q5VXU3 224 aa37.34■■■■□ 3.57
IRF3-207ENST00000593922 SNAPC4Q5SXM2 1469 aa37.33■■■■□ 3.57
IRF3-207ENST00000593922 KIF27Q86VH2 1401 aa37.31■■■■□ 3.56
IRF3-207ENST00000593922 ERICH3Q5RHP9 1530 aa37.31■■■■□ 3.56
IRF3-207ENST00000593922 MAGI1Q96QZ7 1491 aaPredicted RBP37.3■■■■□ 3.56
IRF3-207ENST00000593922 CHD1O14646 1710 aa37.24■■■■□ 3.55
IRF3-207ENST00000593922 ADAMTS12P58397 1594 aa37.23■■■■□ 3.55
IRF3-207ENST00000593922 RUSC2Q8N2Y8 1516 aa37.15■■■■□ 3.54
IRF3-207ENST00000593922 SYNJ2O15056 1496 aa37.14■■■■□ 3.54
IRF3-207ENST00000593922 CUL7Q14999 1698 aa37.11■■■■□ 3.53
IRF3-207ENST00000593922 IGF1RP08069 1367 aa37.07■■■■□ 3.53
IRF3-207ENST00000593922 FHAD1B1AJZ9 1412 aa37.05■■■■□ 3.52
IRF3-207ENST00000593922 GRIN2AQ12879 1464 aa36.97■■■■□ 3.51
IRF3-207ENST00000593922 FBLN2P98095 1184 aa36.94■■■■□ 3.5
IRF3-207ENST00000593922 EEA1Q15075 1411 aa36.93■■■■□ 3.5
IRF3-207ENST00000593922 CHMP7Q8WUX9 453 aaPredicted RBP36.93■■■■□ 3.5
IRF3-207ENST00000593922 CARMIL1Q5VZK9 1371 aa36.85■■■■□ 3.49
IRF3-207ENST00000593922 OSCARQ8IYS5 282 aa36.85■■■■□ 3.49
IRF3-207ENST00000593922 CEP170Q5SW79 1584 aa36.81■■■■□ 3.48
IRF3-207ENST00000593922 CLASP1Q7Z460 1538 aa36.8■■■■□ 3.48
IRF3-207ENST00000593922 NUP160Q12769 1436 aa36.79■■■■□ 3.48
IRF3-207ENST00000593922 PRXQ9BXM0 1461 aa36.77■■■■□ 3.48
IRF3-207ENST00000593922 RAPGEF2Q9Y4G8 1499 aa36.74■■■■□ 3.47
IRF3-207ENST00000593922 CSRNP3Q8WYN3 585 aa36.69■■■■□ 3.46
IRF3-207ENST00000593922 FAM9AQ8IZU1 332 aaPredicted RBP36.65■■■■□ 3.46
IRF3-207ENST00000593922 DNAJC5Q9H3Z4 198 aa36.65■■■■□ 3.46
IRF3-207ENST00000593922 KIF21BO75037 1637 aa36.62■■■■□ 3.45
IRF3-207ENST00000593922 SHROOM2Q13796 1616 aa36.54■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms