RNA–Protein interactions for RNA: ENST00000479364.1

NFIA-210, Transcript of nuclear factor I A, humanhuman

TSL 5

Gene NFIA, Length 1,010 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-210ENST00000479364 NISCHQ9Y2I1 1504 aa26.27■■□□□ 1.8
NFIA-210ENST00000479364 CCDC180Q9P1Z9 1646 aa22.75■■□□□ 1.23
NFIA-210ENST00000479364 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
NFIA-210ENST00000479364 DCAF1Q9Y4B6 1507 aa21.84■■□□□ 1.09
NFIA-210ENST00000479364 SHROOM4Q9ULL8 1493 aa21.56■■□□□ 1.04
NFIA-210ENST00000479364 MYO15BQ96JP2 1530 aa21.44■■□□□ 1.02
NFIA-210ENST00000479364 DCAF8L2P0C7V8 631 aa21.43■■□□□ 1.02
NFIA-210ENST00000479364 NACADO15069 1562 aa21.1■□□□□ 0.97
NFIA-210ENST00000479364 SUPT5HO00267 1087 aaKnown RBP21.04■□□□□ 0.96
NFIA-210ENST00000479364 ABCC9O60706 1549 aa20.94■□□□□ 0.94
NFIA-210ENST00000479364 SCRIBQ14160 1630 aa20.83■□□□□ 0.93
NFIA-210ENST00000479364 RB1CC1Q8TDY2 1594 aa20.78■□□□□ 0.92
NFIA-210ENST00000479364 RSF1Q96T23 1441 aaPredicted RBP20.53■□□□□ 0.88
NFIA-210ENST00000479364 CHIC1Q5VXU3 224 aa20.45■□□□□ 0.86
NFIA-210ENST00000479364 BAZ1AQ9NRL2 1556 aaPredicted RBP20.29■□□□□ 0.84
NFIA-210ENST00000479364 CECR2Q9BXF3 1484 aa20.26■□□□□ 0.83
NFIA-210ENST00000479364 MROH2BQ7Z745 1585 aa20.24■□□□□ 0.83
NFIA-210ENST00000479364 UNC13AQ9UPW8 1703 aa20.23■□□□□ 0.83
NFIA-210ENST00000479364 WIZO95785 1651 aa20.07■□□□□ 0.8
NFIA-210ENST00000479364 SMARCA4P51532 1647 aa20.07■□□□□ 0.8
NFIA-210ENST00000479364 BICRAQ9NZM4 1560 aa20.04■□□□□ 0.8
NFIA-210ENST00000479364 TOP2AP11388 1531 aaKnown RBP19.98■□□□□ 0.79
NFIA-210ENST00000479364 PEG3Q9GZU2 1588 aa19.88■□□□□ 0.77
NFIA-210ENST00000479364 TRIM41Q8WV44 630 aa19.85■□□□□ 0.77
NFIA-210ENST00000479364 PABPN1Q86U42 306 aaKnown RBP eCLIP19.81■□□□□ 0.76
NFIA-210ENST00000479364 SMARCA2P51531 1590 aa19.76■□□□□ 0.75
NFIA-210ENST00000479364 EIF4G1Q04637 1599 aaKnown RBP19.76■□□□□ 0.75
NFIA-210ENST00000479364 CCDC88BA6NC98 1476 aa19.74■□□□□ 0.75
NFIA-210ENST00000479364 ATAD2BQ9ULI0 1458 aa19.64■□□□□ 0.73
NFIA-210ENST00000479364 LOC105371045A0A1W2PR82 267 aa19.58■□□□□ 0.72
NFIA-210ENST00000479364 BAZ1BQ9UIG0 1483 aaKnown RBP19.57■□□□□ 0.72
NFIA-210ENST00000479364 HMGXB3Q12766 1538 aa19.46■□□□□ 0.71
NFIA-210ENST00000479364 NCAPD3P42695 1498 aa19.46■□□□□ 0.71
NFIA-210ENST00000479364 EEA1Q15075 1411 aa19.43■□□□□ 0.7
NFIA-210ENST00000479364 ABCC8Q09428 1581 aa19.38■□□□□ 0.69
NFIA-210ENST00000479364 FAM9AQ8IZU1 332 aaPredicted RBP19.35■□□□□ 0.69
NFIA-210ENST00000479364 WRNQ14191 1432 aaPredicted RBP eCLIP19.34■□□□□ 0.69
NFIA-210ENST00000479364 TRIM26Q12899 539 aaPredicted RBP19.25■□□□□ 0.67
NFIA-210ENST00000479364 PCGF6Q9BYE7 350 aa19.22■□□□□ 0.67
NFIA-210ENST00000479364 CSRNP3Q8WYN3 585 aa19.17■□□□□ 0.66
NFIA-210ENST00000479364 DNAJC5BQ9UF47 199 aa19.17■□□□□ 0.66
NFIA-210ENST00000479364 SYNJ1O43426 1573 aa19.15■□□□□ 0.66
NFIA-210ENST00000479364 SOGA1O94964 1423 aa19.15■□□□□ 0.66
NFIA-210ENST00000479364 TNIKQ9UKE5 1360 aa19.14■□□□□ 0.65
NFIA-210ENST00000479364 HRCP23327 699 aa19.13■□□□□ 0.65
NFIA-210ENST00000479364 TOP2BQ02880 1626 aa19.13■□□□□ 0.65
NFIA-210ENST00000479364 CFTRP13569 1480 aa19.12■□□□□ 0.65
NFIA-210ENST00000479364 BIVM-ERCC5R4GMW8 1640 aa19.1■□□□□ 0.65
NFIA-210ENST00000479364 GOLGA3Q08378 1498 aa19.08■□□□□ 0.64
NFIA-210ENST00000479364 CEP164Q9UPV0 1460 aa19.05■□□□□ 0.64
NFIA-210ENST00000479364 KIF21BO75037 1637 aa19.05■□□□□ 0.64
NFIA-210ENST00000479364 PRDM2Q13029 1718 aa19.05■□□□□ 0.64
NFIA-210ENST00000479364 CC2D2AQ9P2K1 1620 aa19■□□□□ 0.63
NFIA-210ENST00000479364 RUSC2Q8N2Y8 1516 aa19■□□□□ 0.63
NFIA-210ENST00000479364 CEP162Q5TB80 1403 aa18.99■□□□□ 0.63
NFIA-210ENST00000479364 CADPSQ9ULU8 1353 aa18.96■□□□□ 0.63
NFIA-210ENST00000479364 EHMT2Q96KQ7 1210 aa18.95■□□□□ 0.62
NFIA-210ENST00000479364 UBTFP17480 764 aaKnown RBP18.93■□□□□ 0.62
NFIA-210ENST00000479364 CUX1P39880 1505 aa18.91■□□□□ 0.62
NFIA-210ENST00000479364 ERICH3Q5RHP9 1530 aa18.87■□□□□ 0.61
NFIA-210ENST00000479364 KIF27Q86VH2 1401 aa18.85■□□□□ 0.61
NFIA-210ENST00000479364 ZEB1P37275 1124 aaPredicted RBP18.85■□□□□ 0.61
NFIA-210ENST00000479364 PRXQ9BXM0 1461 aa18.8■□□□□ 0.6
NFIA-210ENST00000479364 CLIP1P30622 1438 aa18.76■□□□□ 0.59
NFIA-210ENST00000479364 RAPGEF2Q9Y4G8 1499 aa18.76■□□□□ 0.59
NFIA-210ENST00000479364 FANCD2Q9BXW9 1451 aa18.72■□□□□ 0.59
NFIA-210ENST00000479364 LAMC3Q9Y6N6 1575 aa18.72■□□□□ 0.59
NFIA-210ENST00000479364 VPS8Q8N3P4 1428 aa18.68■□□□□ 0.58
NFIA-210ENST00000479364 DNMBPQ6XZF7 1577 aa18.67■□□□□ 0.58
NFIA-210ENST00000479364 FGD5Q6ZNL6 1462 aa18.65■□□□□ 0.58
NFIA-210ENST00000479364 CUX2O14529 1486 aa18.62■□□□□ 0.57
NFIA-210ENST00000479364 PDS5BQ9NTI5 1447 aa18.58■□□□□ 0.57
NFIA-210ENST00000479364 IGF1RP08069 1367 aa18.58■□□□□ 0.57
NFIA-210ENST00000479364 APLP2Q06481 763 aa18.58■□□□□ 0.56
NFIA-210ENST00000479364 TOPBP1Q92547 1522 aa18.56■□□□□ 0.56
NFIA-210ENST00000479364 ABCA10Q8WWZ4 1543 aa18.55■□□□□ 0.56
NFIA-210ENST00000479364 PPARGC1BQ86YN6 1023 aaKnown RBP18.54■□□□□ 0.56
NFIA-210ENST00000479364 CARMIL1Q5VZK9 1371 aa18.52■□□□□ 0.55
NFIA-210ENST00000479364 NESP48681 1621 aa18.49■□□□□ 0.55
NFIA-210ENST00000479364 POLA1P09884 1462 aaPredicted RBP18.49■□□□□ 0.55
NFIA-210ENST00000479364 ARAP1Q96P48 1450 aa18.47■□□□□ 0.55
NFIA-210ENST00000479364 CUL7Q14999 1698 aa18.45■□□□□ 0.54
NFIA-210ENST00000479364 URB2Q14146 1524 aaKnown RBP18.42■□□□□ 0.54
NFIA-210ENST00000479364 ARHGAP35Q9NRY4 1499 aa18.39■□□□□ 0.54
NFIA-210ENST00000479364 WDR97A6NE52 1622 aa18.39■□□□□ 0.53
NFIA-210ENST00000479364 RAD54L2Q9Y4B4 1467 aa18.38■□□□□ 0.53
NFIA-210ENST00000479364 MAP3K1Q13233 1512 aa18.38■□□□□ 0.53
NFIA-210ENST00000479364 CCER1Q8TC90 406 aaPredicted RBP18.36■□□□□ 0.53
NFIA-210ENST00000479364 EFCAB5A4FU69 1503 aa18.33■□□□□ 0.52
NFIA-210ENST00000479364 FHAD1B1AJZ9 1412 aa18.32■□□□□ 0.52
NFIA-210ENST00000479364 ABCA5Q8WWZ7 1642 aa18.32■□□□□ 0.52
NFIA-210ENST00000479364 RANGAP1P46060 587 aaPredicted RBP18.31■□□□□ 0.52
NFIA-210ENST00000479364 KIF21AQ7Z4S6 1674 aa18.31■□□□□ 0.52
NFIA-210ENST00000479364 TTBK1Q5TCY1 1321 aaPredicted RBP18.29■□□□□ 0.52
NFIA-210ENST00000479364 GAPVD1Q14C86 1478 aa18.28■□□□□ 0.52
NFIA-210ENST00000479364 MRC2Q9UBG0 1479 aa18.26■□□□□ 0.51
NFIA-210ENST00000479364 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.26■□□□□ 0.51
NFIA-210ENST00000479364 CTTNBP2Q8WZ74 1663 aa18.25■□□□□ 0.51
NFIA-210ENST00000479364 TARBP1Q13395 1621 aaKnown RBP18.23■□□□□ 0.51
NFIA-210ENST00000479364 AQRO60306 1485 aaKnown RBP eCLIP18.23■□□□□ 0.511e-7■■□□□ 12.1
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms