Protein–RNA interactions for Protein: Q00839

HNRNPU, Heterogeneous nuclear ribonucleoprotein U, humanhuman

Known RBP eCLIP

Length 825 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPUQ00839 RRBP1-210ENST00000610403 3309 ntTSL 5 BASIC16.24■□□□□ 0.196e-6■□□□□ 8.3
HNRNPUQ00839 IRF3-206ENST00000593818 924 ntTSL 216.04■□□□□ 0.162e-8■□□□□ 8.3
HNRNPUQ00839 NFIA-202ENST00000371184 1348 ntTSL 5 BASIC15.95■□□□□ 0.146e-6■□□□□ 8.3
HNRNPUQ00839 NFIA-207ENST00000403491 9487 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.036e-6■□□□□ 8.3
HNRNPUQ00839 NFIA-203ENST00000371185 1714 ntTSL 5 BASIC13.97□□□□□ -0.176e-6■□□□□ 8.3
HNRNPUQ00839 HMGA2-209ENST00000539662 485 ntTSL 313.72□□□□□ -0.216e-6■□□□□ 8.3
HNRNPUQ00839 NFIA-206ENST00000371191 1916 ntTSL 5 BASIC11.92□□□□□ -0.56e-6■□□□□ 8.3
HNRNPUQ00839 NFIA-212ENST00000485903 1674 ntTSL 5 BASIC11.53□□□□□ -0.566e-6■□□□□ 8.3
HNRNPUQ00839 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC11.31□□□□□ -0.66e-6■□□□□ 8.3
HNRNPUQ00839 LINC02365-203ENST00000522554 802 ntTSL 2 BASIC10.49□□□□□ -0.736e-6■□□□□ 8.3
HNRNPUQ00839 LINC02365-201ENST00000519173 473 ntTSL 310.09□□□□□ -0.796e-6■□□□□ 8.3
HNRNPUQ00839 AKIRIN1-204ENST00000531822 718 ntTSL 510.01□□□□□ -0.816e-6■□□□□ 8.3
HNRNPUQ00839 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC8.69□□□□□ -1.026e-6■□□□□ 8.3
HNRNPUQ00839 NFIA-209ENST00000476646 730 ntTSL 36.38□□□□□ -1.396e-6■□□□□ 8.3
HNRNPUQ00839 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.55□□□□□ -1.526e-6■□□□□ 8.3
HNRNPUQ00839 GPI-212ENST00000589985 1516 ntTSL 326.15■■□□□ 1.786e-8■□□□□ 8.3
HNRNPUQ00839 SAFB-209ENST00000591666 632 ntTSL 325.42■■□□□ 1.664e-7■□□□□ 8.3
HNRNPUQ00839 SAFB-207ENST00000589863 2708 ntTSL 223.72■■□□□ 1.394e-7■□□□□ 8.3
HNRNPUQ00839 SAFB-204ENST00000586934 995 ntTSL 523.3■■□□□ 1.324e-7■□□□□ 8.3
HNRNPUQ00839 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.014e-7■□□□□ 8.3
HNRNPUQ00839 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.974e-7■□□□□ 8.3
HNRNPUQ00839 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.94e-7■□□□□ 8.3
HNRNPUQ00839 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.734e-7■□□□□ 8.3
HNRNPUQ00839 SAFB-208ENST00000590485 548 ntTSL 37.18□□□□□ -1.264e-7■□□□□ 8.3
HNRNPUQ00839 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.043e-8■□□□□ 8.3
HNRNPUQ00839 AC068580.4-204ENST00000427721 1007 ntTSL 220.29■□□□□ 0.843e-8■□□□□ 8.3
HNRNPUQ00839 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.783e-8■□□□□ 8.3
HNRNPUQ00839 IFITM10-202ENST00000382123 3807 ntTSL 319.22■□□□□ 0.673e-8■□□□□ 8.3
HNRNPUQ00839 AC068580.4-202ENST00000636579 350 ntTSL 318.95■□□□□ 0.623e-8■□□□□ 8.3
HNRNPUQ00839 AC068580.4-203ENST00000636397 4038 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.173e-8■□□□□ 8.3
HNRNPUQ00839 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.685e-8■□□□□ 8.2
HNRNPUQ00839 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.135e-8■□□□□ 8.2
HNRNPUQ00839 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC19.29■□□□□ 0.683e-6■□□□□ 8.2
HNRNPUQ00839 FAM214A-206ENST00000561543 931 ntTSL 331.29■■■□□ 2.61e-7■□□□□ 8.2
HNRNPUQ00839 FAM214A-205ENST00000561490 547 ntTSL 42.09□□□□□ -2.071e-7■□□□□ 8.2
HNRNPUQ00839 FAM214A-209ENST00000566768 576 ntTSL 31.62□□□□□ -2.151e-7■□□□□ 8.2
HNRNPUQ00839 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.377e-6■□□□□ 8.2
HNRNPUQ00839 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC22.08■■□□□ 1.137e-6■□□□□ 8.2
HNRNPUQ00839 EFNA1-203ENST00000469878 1288 ntTSL 316.79■□□□□ 0.287e-6■□□□□ 8.2
HNRNPUQ00839 SMAD3-213ENST00000560175 542 ntTSL 416.71■□□□□ 0.277e-6■□□□□ 8.2
HNRNPUQ00839 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC16.58■□□□□ 0.247e-6■□□□□ 8.2
HNRNPUQ00839 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC17.77■□□□□ 0.441e-323■□□□□ 8.2
HNRNPUQ00839 AC105402.3-201ENST00000601658 784 ntTSL 5 BASIC13.82□□□□□ -0.21e-323■□□□□ 8.2
HNRNPUQ00839 RBM47-208ENST00000511598 836 ntTSL 225.14■■□□□ 1.625e-6■□□□□ 8.1
HNRNPUQ00839 RBM47-213ENST00000514782 797 ntTSL 324.19■■□□□ 1.465e-6■□□□□ 8.1
HNRNPUQ00839 RBM47-205ENST00000505414 856 ntTSL 323.47■■□□□ 1.355e-6■□□□□ 8.1
HNRNPUQ00839 RBM47-214ENST00000515053 1100 ntTSL 223.29■■□□□ 1.325e-6■□□□□ 8.1
HNRNPUQ00839 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC23.28■■□□□ 1.325e-6■□□□□ 8.1
HNRNPUQ00839 RBM47-209ENST00000511902 657 ntTSL 322.17■■□□□ 1.145e-6■□□□□ 8.1
HNRNPUQ00839 RBM47-204ENST00000505220 741 ntTSL 219.93■□□□□ 0.785e-6■□□□□ 8.1
HNRNPUQ00839 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.595e-6■□□□□ 8.1
HNRNPUQ00839 RBM47-207ENST00000510871 4951 ntTSL 1 (best)18.56■□□□□ 0.565e-6■□□□□ 8.1
HNRNPUQ00839 MSI2-211ENST00000579531 472 ntTSL 26.04□□□□□ -1.445e-6■□□□□ 8.1
HNRNPUQ00839 MSI2-213ENST00000581523 534 ntTSL 25.85□□□□□ -1.475e-6■□□□□ 8.1
HNRNPUQ00839 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.11e-7■□□□□ 8.1
HNRNPUQ00839 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.16□□□□□ -1.261e-7■□□□□ 8.1
HNRNPUQ00839 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC26.88■■□□□ 1.899e-6■□□□□ 8.1
HNRNPUQ00839 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.839e-6■□□□□ 8.1
HNRNPUQ00839 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.799e-6■□□□□ 8.1
HNRNPUQ00839 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC26.04■■□□□ 1.769e-6■□□□□ 8.1
HNRNPUQ00839 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC25.06■■□□□ 1.69e-6■□□□□ 8.1
HNRNPUQ00839 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.499e-6■□□□□ 8.1
HNRNPUQ00839 ETV4-206ENST00000585508 760 ntTSL 524.29■■□□□ 1.489e-6■□□□□ 8.1
HNRNPUQ00839 BRD2-215ENST00000580234 718 ntTSL 423.7■■□□□ 1.389e-6■□□□□ 8.1
HNRNPUQ00839 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.349e-6■□□□□ 8.1
HNRNPUQ00839 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC23.22■■□□□ 1.319e-6■□□□□ 8.1
HNRNPUQ00839 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.289e-6■□□□□ 8.1
HNRNPUQ00839 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.929e-6■□□□□ 8.1
HNRNPUQ00839 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC19.88■□□□□ 0.779e-6■□□□□ 8.1
HNRNPUQ00839 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.739e-6■□□□□ 8.1
HNRNPUQ00839 ETV4-210ENST00000590236 616 ntTSL 319.57■□□□□ 0.729e-6■□□□□ 8.1
HNRNPUQ00839 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC19.26■□□□□ 0.679e-6■□□□□ 8.1
HNRNPUQ00839 BRD2-206ENST00000456339 887 ntTSL 418.32■□□□□ 0.529e-6■□□□□ 8.1
HNRNPUQ00839 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.05■□□□□ 0.489e-6■□□□□ 8.1
HNRNPUQ00839 ETV4-209ENST00000587151 582 ntTSL 517.94■□□□□ 0.469e-6■□□□□ 8.1
HNRNPUQ00839 RREB1-208ENST00000483150 2833 ntTSL 1 (best)17.5■□□□□ 0.399e-6■□□□□ 8.1
HNRNPUQ00839 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.199e-6■□□□□ 8.1
HNRNPUQ00839 RREB1-207ENST00000475946 9067 ntTSL 1 (best)11.09□□□□□ -0.639e-6■□□□□ 8.1
HNRNPUQ00839 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC32.43■■■□□ 2.788e-8■□□□□ 8.1
HNRNPUQ00839 RANBP1-210ENST00000435265 1879 ntTSL 226.2■■□□□ 1.788e-8■□□□□ 8.1
HNRNPUQ00839 RANBP1-207ENST00000423859 832 ntTSL 323.24■■□□□ 1.318e-8■□□□□ 8.1
HNRNPUQ00839 RANBP1-205ENST00000418705 932 ntTSL 321.06■□□□□ 0.968e-8■□□□□ 8.1
HNRNPUQ00839 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC19.24■□□□□ 0.678e-8■□□□□ 8.1
HNRNPUQ00839 RANBP1-203ENST00000411892 584 ntTSL 219.01■□□□□ 0.638e-8■□□□□ 8.1
HNRNPUQ00839 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.628e-8■□□□□ 8.1
HNRNPUQ00839 RANBP1-211ENST00000448394 688 ntTSL 218.6■□□□□ 0.578e-8■□□□□ 8.1
HNRNPUQ00839 NEAT1_1.1-201ENST00000620348 120 ntBASIC14.44□□□□□ -0.11e-323■□□□□ 8
HNRNPUQ00839 LINC00894-204ENST00000444489 2951 ntTSL 515.65■□□□□ 0.11e-6■□□□□ 8
Retrieved 88 of 2,288 protein–RNA pairs in 110.7 ms