RNA–Protein interactions for RNA: ENST00000482962.5

ARF1-210, Transcript of ADP ribosylation factor 1, humanhuman

TSL 3

Gene ARF1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-210ENST00000482962 NISCHQ9Y2I1 1504 aa36.28■■■■□ 3.4
ARF1-210ENST00000482962 CCDC180Q9P1Z9 1646 aa32.37■■■□□ 2.77
ARF1-210ENST00000482962 ABCC9O60706 1549 aa31.37■■■□□ 2.61
ARF1-210ENST00000482962 RB1CC1Q8TDY2 1594 aa30.36■■■□□ 2.45
ARF1-210ENST00000482962 NACADO15069 1562 aa30.33■■■□□ 2.45
ARF1-210ENST00000482962 ZCCHC6Q5VYS8 1495 aaKnown RBP30.27■■■□□ 2.44
ARF1-210ENST00000482962 MYO15BQ96JP2 1530 aa30.21■■■□□ 2.43
ARF1-210ENST00000482962 DCAF8L2P0C7V8 631 aa30.1■■■□□ 2.41
ARF1-210ENST00000482962 DCAF1Q9Y4B6 1507 aa30.1■■■□□ 2.41
ARF1-210ENST00000482962 UNC13AQ9UPW8 1703 aa29.63■■■□□ 2.33
ARF1-210ENST00000482962 SCRIBQ14160 1630 aa29.42■■■□□ 2.3
ARF1-210ENST00000482962 BICRAQ9NZM4 1560 aa29.34■■■□□ 2.29
ARF1-210ENST00000482962 SHROOM4Q9ULL8 1493 aa29.23■■■□□ 2.27
ARF1-210ENST00000482962 PABPN1Q86U42 306 aaKnown RBP eCLIP29.22■■■□□ 2.27
ARF1-210ENST00000482962 EIF4G1Q04637 1599 aaKnown RBP28.6■■■□□ 2.17
ARF1-210ENST00000482962 DNAJC5BQ9UF47 199 aa28.53■■■□□ 2.16
ARF1-210ENST00000482962 CC2D2AQ9P2K1 1620 aa28.45■■■□□ 2.14
ARF1-210ENST00000482962 CECR2Q9BXF3 1484 aa28.21■■■□□ 2.11
ARF1-210ENST00000482962 BAZ1AQ9NRL2 1556 aaPredicted RBP28.18■■■□□ 2.1
ARF1-210ENST00000482962 SMARCA4P51532 1647 aa28.17■■■□□ 2.1
ARF1-210ENST00000482962 SMARCA2P51531 1590 aa28■■■□□ 2.07
ARF1-210ENST00000482962 ATAD2BQ9ULI0 1458 aa27.93■■■□□ 2.06
ARF1-210ENST00000482962 PEG3Q9GZU2 1588 aa27.92■■■□□ 2.06
ARF1-210ENST00000482962 MROH2BQ7Z745 1585 aa27.91■■■□□ 2.06
ARF1-210ENST00000482962 NCAPD3P42695 1498 aa27.91■■■□□ 2.06
ARF1-210ENST00000482962 HMGXB3Q12766 1538 aa27.88■■■□□ 2.05
ARF1-210ENST00000482962 BAZ1BQ9UIG0 1483 aaKnown RBP27.76■■■□□ 2.04
ARF1-210ENST00000482962 WIZO95785 1651 aa27.64■■■□□ 2.02
ARF1-210ENST00000482962 RSF1Q96T23 1441 aaPredicted RBP27.61■■■□□ 2.01
ARF1-210ENST00000482962 TOP2AP11388 1531 aaKnown RBP27.42■■□□□ 1.98
ARF1-210ENST00000482962 LAMC3Q9Y6N6 1575 aa27.25■■□□□ 1.95
ARF1-210ENST00000482962 NESP48681 1621 aa27.15■■□□□ 1.94
ARF1-210ENST00000482962 ERCC6Q03468 1493 aa27.12■■□□□ 1.93
ARF1-210ENST00000482962 CADPSQ9ULU8 1353 aa27.08■■□□□ 1.93
ARF1-210ENST00000482962 PDS5BQ9NTI5 1447 aa27.01■■□□□ 1.91
ARF1-210ENST00000482962 CCDC88BA6NC98 1476 aa27■■□□□ 1.91
ARF1-210ENST00000482962 CFTRP13569 1480 aa26.97■■□□□ 1.91
ARF1-210ENST00000482962 KIF21AQ7Z4S6 1674 aa26.95■■□□□ 1.9
ARF1-210ENST00000482962 PRDM2Q13029 1718 aa26.93■■□□□ 1.9
ARF1-210ENST00000482962 SUPT5HO00267 1087 aaKnown RBP26.88■■□□□ 1.89
ARF1-210ENST00000482962 THOC2Q8NI27 1593 aaKnown RBP26.85■■□□□ 1.89
ARF1-210ENST00000482962 CUX2O14529 1486 aa26.83■■□□□ 1.89
ARF1-210ENST00000482962 CEP164Q9UPV0 1460 aa26.81■■□□□ 1.88
ARF1-210ENST00000482962 FANCD2Q9BXW9 1451 aa26.81■■□□□ 1.88
ARF1-210ENST00000482962 MRC2Q9UBG0 1479 aa26.74■■□□□ 1.87
ARF1-210ENST00000482962 WDR62O43379 1518 aa26.67■■□□□ 1.86
ARF1-210ENST00000482962 URB2Q14146 1524 aaKnown RBP26.5■■□□□ 1.83
ARF1-210ENST00000482962 ABCC8Q09428 1581 aa26.46■■□□□ 1.83
ARF1-210ENST00000482962 DNMBPQ6XZF7 1577 aa26.42■■□□□ 1.82
ARF1-210ENST00000482962 TOPBP1Q92547 1522 aa26.39■■□□□ 1.81
ARF1-210ENST00000482962 IFT140Q96RY7 1462 aa26.23■■□□□ 1.79
ARF1-210ENST00000482962 CUX1P39880 1505 aa26.2■■□□□ 1.79
ARF1-210ENST00000482962 POLA1P09884 1462 aaPredicted RBP26.17■■□□□ 1.78
ARF1-210ENST00000482962 FGD5Q6ZNL6 1462 aa26.12■■□□□ 1.77
ARF1-210ENST00000482962 TARBP1Q13395 1621 aaKnown RBP26.11■■□□□ 1.77
ARF1-210ENST00000482962 BIVM-ERCC5R4GMW8 1640 aa26.09■■□□□ 1.77
ARF1-210ENST00000482962 WRNQ14191 1432 aaPredicted RBP eCLIP26.08■■□□□ 1.77
ARF1-210ENST00000482962 TOP2BQ02880 1626 aa26.06■■□□□ 1.76
ARF1-210ENST00000482962 WDR97A6NE52 1622 aa26.05■■□□□ 1.76
ARF1-210ENST00000482962 EIF4G3O43432 1585 aaKnown RBP26.04■■□□□ 1.76
ARF1-210ENST00000482962 SOGA1O94964 1423 aa26.02■■□□□ 1.76
ARF1-210ENST00000482962 SYNJ1O43426 1573 aa26.02■■□□□ 1.76
ARF1-210ENST00000482962 ZNF608Q9ULD9 1512 aaPredicted RBP26.01■■□□□ 1.75
ARF1-210ENST00000482962 RAD54L2Q9Y4B4 1467 aa25.98■■□□□ 1.75
ARF1-210ENST00000482962 ABCA10Q8WWZ4 1543 aa25.89■■□□□ 1.74
ARF1-210ENST00000482962 AQRO60306 1485 aaKnown RBP eCLIP25.85■■□□□ 1.735e-7■■■■□ 21.3
ARF1-210ENST00000482962 ABCA5Q8WWZ7 1642 aa25.82■■□□□ 1.72
ARF1-210ENST00000482962 TDRD9Q8NDG6 1382 aaKnown RBP25.82■■□□□ 1.72
ARF1-210ENST00000482962 PBRM1Q86U86 1689 aa25.79■■□□□ 1.72
ARF1-210ENST00000482962 GRIN2BQ13224 1484 aa25.78■■□□□ 1.72
ARF1-210ENST00000482962 GAPVD1Q14C86 1478 aa25.76■■□□□ 1.71
ARF1-210ENST00000482962 MAGI1Q96QZ7 1491 aaPredicted RBP25.73■■□□□ 1.71
ARF1-210ENST00000482962 DNAJC5Q9H3Z4 198 aa25.73■■□□□ 1.71
ARF1-210ENST00000482962 SNAPC4Q5SXM2 1469 aa25.71■■□□□ 1.71
ARF1-210ENST00000482962 CHD1O14646 1710 aa25.68■■□□□ 1.7
ARF1-210ENST00000482962 ERICH3Q5RHP9 1530 aa25.63■■□□□ 1.69
ARF1-210ENST00000482962 SYNJ2O15056 1496 aa25.6■■□□□ 1.69
ARF1-210ENST00000482962 OSCARQ8IYS5 282 aa25.6■■□□□ 1.69
ARF1-210ENST00000482962 ADAMTS12P58397 1594 aa25.57■■□□□ 1.68
ARF1-210ENST00000482962 KIF27Q86VH2 1401 aa25.55■■□□□ 1.68
ARF1-210ENST00000482962 FBLN2P98095 1184 aa25.51■■□□□ 1.67
ARF1-210ENST00000482962 CHMP7Q8WUX9 453 aaPredicted RBP25.49■■□□□ 1.67
ARF1-210ENST00000482962 FHAD1B1AJZ9 1412 aa25.48■■□□□ 1.67
ARF1-210ENST00000482962 CUL7Q14999 1698 aa25.46■■□□□ 1.67
ARF1-210ENST00000482962 TRIM41Q8WV44 630 aa25.45■■□□□ 1.66
ARF1-210ENST00000482962 GRIN2AQ12879 1464 aa25.44■■□□□ 1.66
ARF1-210ENST00000482962 CLASP1Q7Z460 1538 aa25.39■■□□□ 1.66
ARF1-210ENST00000482962 IGF1RP08069 1367 aa25.32■■□□□ 1.64
ARF1-210ENST00000482962 NUP160Q12769 1436 aa25.31■■□□□ 1.64
ARF1-210ENST00000482962 CEP170Q5SW79 1584 aa25.29■■□□□ 1.64
ARF1-210ENST00000482962 ARHGEF11O15085 1522 aa25.27■■□□□ 1.64
ARF1-210ENST00000482962 RIMBP3CA6NJZ7 1639 aa25.26■■□□□ 1.63
ARF1-210ENST00000482962 RIMBP3BA6NNM3 1639 aa25.26■■□□□ 1.63
ARF1-210ENST00000482962 RIMBP3Q9UFD9 1639 aa25.26■■□□□ 1.63
ARF1-210ENST00000482962 CARMIL1Q5VZK9 1371 aa25.22■■□□□ 1.63
ARF1-210ENST00000482962 RUSC2Q8N2Y8 1516 aa25.21■■□□□ 1.63
ARF1-210ENST00000482962 EEA1Q15075 1411 aa25.18■■□□□ 1.62
ARF1-210ENST00000482962 SHROOM2Q13796 1616 aa25.15■■□□□ 1.62
ARF1-210ENST00000482962 RAPGEF2Q9Y4G8 1499 aa25.14■■□□□ 1.61
ARF1-210ENST00000482962 CHIC1Q5VXU3 224 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms