RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 NISCHQ9Y2I1 1504 aa30.77■■■□□ 2.52
IRF3-219ENST00000597636 CCDC180Q9P1Z9 1646 aa26.42■■□□□ 1.82
IRF3-219ENST00000597636 SHROOM4Q9ULL8 1493 aa26.33■■□□□ 1.81
IRF3-219ENST00000597636 DCAF8L2P0C7V8 631 aa26.32■■□□□ 1.8
IRF3-219ENST00000597636 SUPT5HO00267 1087 aaKnown RBP26.15■■□□□ 1.78
IRF3-219ENST00000597636 HRCP23327 699 aa26.1■■□□□ 1.77
IRF3-219ENST00000597636 MYO15BQ96JP2 1530 aa25.78■■□□□ 1.72
IRF3-219ENST00000597636 ZCCHC6Q5VYS8 1495 aaKnown RBP25.78■■□□□ 1.72
IRF3-219ENST00000597636 CHIC1Q5VXU3 224 aa25.75■■□□□ 1.71
IRF3-219ENST00000597636 ABCC9O60706 1549 aa25.69■■□□□ 1.7
IRF3-219ENST00000597636 PCGF6Q9BYE7 350 aa25.63■■□□□ 1.69
IRF3-219ENST00000597636 PPARGC1BQ86YN6 1023 aaKnown RBP25.45■■□□□ 1.66
IRF3-219ENST00000597636 DCAF1Q9Y4B6 1507 aa25.29■■□□□ 1.64
IRF3-219ENST00000597636 LOC105371045A0A1W2PR82 267 aa25.03■■□□□ 1.6
IRF3-219ENST00000597636 TRIM26Q12899 539 aaPredicted RBP24.99■■□□□ 1.59
IRF3-219ENST00000597636 SCRIBQ14160 1630 aa24.89■■□□□ 1.58
IRF3-219ENST00000597636 PELP1Q8IZL8 1130 aaKnown RBP24.79■■□□□ 1.56
IRF3-219ENST00000597636 NACADO15069 1562 aa24.74■■□□□ 1.55
IRF3-219ENST00000597636 ZEB1P37275 1124 aaPredicted RBP24.73■■□□□ 1.55
IRF3-219ENST00000597636 RB1CC1Q8TDY2 1594 aa24.6■■□□□ 1.53
IRF3-219ENST00000597636 PABPN1Q86U42 306 aaKnown RBP eCLIP24.51■■□□□ 1.512e-7■■■■□ 22.6
IRF3-219ENST00000597636 SCAF1Q9H7N4 1312 aaKnown RBP24.47■■□□□ 1.51
IRF3-219ENST00000597636 TRIM41Q8WV44 630 aa24.3■■□□□ 1.48
IRF3-219ENST00000597636 RSF1Q96T23 1441 aaPredicted RBP24.22■■□□□ 1.47
IRF3-219ENST00000597636 CECR2Q9BXF3 1484 aa24.21■■□□□ 1.47
IRF3-219ENST00000597636 UNC13AQ9UPW8 1703 aa24.19■■□□□ 1.46
IRF3-219ENST00000597636 FAM9AQ8IZU1 332 aaPredicted RBP24.14■■□□□ 1.46
IRF3-219ENST00000597636 ACIN1Q9UKV3 1341 aaKnown RBP24.01■■□□□ 1.43
IRF3-219ENST00000597636 BICRAQ9NZM4 1560 aa23.96■■□□□ 1.43
IRF3-219ENST00000597636 MROH2BQ7Z745 1585 aa23.95■■□□□ 1.43
IRF3-219ENST00000597636 EHMT2Q96KQ7 1210 aa23.93■■□□□ 1.42
IRF3-219ENST00000597636 NEUROD1Q13562 356 aa23.91■■□□□ 1.42
IRF3-219ENST00000597636 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.85■■□□□ 1.41
IRF3-219ENST00000597636 CCER1Q8TC90 406 aaPredicted RBP23.84■■□□□ 1.41
IRF3-219ENST00000597636 WIZO95785 1651 aa23.78■■□□□ 1.4
IRF3-219ENST00000597636 CENPBP07199 599 aaPredicted RBP23.76■■□□□ 1.39
IRF3-219ENST00000597636 MYT1Q01538 1121 aa23.76■■□□□ 1.39
IRF3-219ENST00000597636 DIEXFQ68CQ4 756 aaKnown RBP23.75■■□□□ 1.39
IRF3-219ENST00000597636 GTF3C3Q9Y5Q9 886 aa23.75■■□□□ 1.39
IRF3-219ENST00000597636 BAZ1AQ9NRL2 1556 aaPredicted RBP23.68■■□□□ 1.38
IRF3-219ENST00000597636 SMARCA4P51532 1647 aa23.61■■□□□ 1.37
IRF3-219ENST00000597636 WRNQ14191 1432 aaPredicted RBP eCLIP23.49■■□□□ 1.35
IRF3-219ENST00000597636 ZNF316A6NFI3 1004 aaPredicted RBP23.39■■□□□ 1.34
IRF3-219ENST00000597636 EIF4G1Q04637 1599 aaKnown RBP23.39■■□□□ 1.34
IRF3-219ENST00000597636 TTBK1Q5TCY1 1321 aaPredicted RBP23.33■■□□□ 1.33
IRF3-219ENST00000597636 CEP162Q5TB80 1403 aa23.32■■□□□ 1.32
IRF3-219ENST00000597636 ATAD2BQ9ULI0 1458 aa23.3■■□□□ 1.32
IRF3-219ENST00000597636 CCDC88BA6NC98 1476 aa23.27■■□□□ 1.32
IRF3-219ENST00000597636 TOP2AP11388 1531 aaKnown RBP23.26■■□□□ 1.31
IRF3-219ENST00000597636 TNIKQ9UKE5 1360 aa23.25■■□□□ 1.31
IRF3-219ENST00000597636 YTHDC1Q96MU7 727 aaKnown RBP23.22■■□□□ 1.31
IRF3-219ENST00000597636 BAZ1BQ9UIG0 1483 aaKnown RBP23.21■■□□□ 1.31
IRF3-219ENST00000597636 ABCC8Q09428 1581 aa23.17■■□□□ 1.3
IRF3-219ENST00000597636 MIER1Q8N108 512 aa23.15■■□□□ 1.3
IRF3-219ENST00000597636 SMARCA2P51531 1590 aa23.15■■□□□ 1.3
IRF3-219ENST00000597636 SOGA1O94964 1423 aa23.13■■□□□ 1.29
IRF3-219ENST00000597636 EEA1Q15075 1411 aa23.09■■□□□ 1.29
IRF3-219ENST00000597636 CSRNP3Q8WYN3 585 aa23.08■■□□□ 1.29
IRF3-219ENST00000597636 PEG3Q9GZU2 1588 aa23.07■■□□□ 1.28
IRF3-219ENST00000597636 UBTFP17480 764 aaKnown RBP23.06■■□□□ 1.28
IRF3-219ENST00000597636 DNAJC5BQ9UF47 199 aa22.99■■□□□ 1.27
IRF3-219ENST00000597636 CC2D2AQ9P2K1 1620 aa22.98■■□□□ 1.27
IRF3-219ENST00000597636 RUSC2Q8N2Y8 1516 aa22.97■■□□□ 1.27
IRF3-219ENST00000597636 GOLGA3Q08378 1498 aa22.97■■□□□ 1.27
IRF3-219ENST00000597636 NCAPD3P42695 1498 aa22.95■■□□□ 1.26
IRF3-219ENST00000597636 HNRNPUL2Q1KMD3 747 aaKnown RBP22.95■■□□□ 1.26
IRF3-219ENST00000597636 CLSPNQ9HAW4 1339 aa22.81■■□□□ 1.24
IRF3-219ENST00000597636 HMGXB3Q12766 1538 aa22.79■■□□□ 1.24
IRF3-219ENST00000597636 CEP164Q9UPV0 1460 aa22.77■■□□□ 1.24
IRF3-219ENST00000597636 CLIP1P30622 1438 aa22.76■■□□□ 1.23
IRF3-219ENST00000597636 VPS8Q8N3P4 1428 aa22.74■■□□□ 1.23
IRF3-219ENST00000597636 SUPT16HQ9Y5B9 1047 aaKnown RBP22.72■■□□□ 1.23
IRF3-219ENST00000597636 KIF21BO75037 1637 aa22.71■■□□□ 1.23
IRF3-219ENST00000597636 APLP2Q06481 763 aa22.68■■□□□ 1.22
IRF3-219ENST00000597636 DHX57Q6P158 1386 aaKnown RBP22.58■■□□□ 1.21
IRF3-219ENST00000597636 NESP48681 1621 aa22.57■■□□□ 1.2
IRF3-219ENST00000597636 SYNJ1O43426 1573 aa22.55■■□□□ 1.2
IRF3-219ENST00000597636 CADPSQ9ULU8 1353 aa22.54■■□□□ 1.2
IRF3-219ENST00000597636 TSHZ2Q9NRE2 1034 aa22.53■■□□□ 1.2
IRF3-219ENST00000597636 CFTRP13569 1480 aa22.52■■□□□ 1.2
IRF3-219ENST00000597636 RAPGEF2Q9Y4G8 1499 aa22.52■■□□□ 1.2
IRF3-219ENST00000597636 ANP32EQ9BTT0 268 aa22.45■■□□□ 1.18
IRF3-219ENST00000597636 RANGAP1P46060 587 aaPredicted RBP22.43■■□□□ 1.18
IRF3-219ENST00000597636 CUX1P39880 1505 aa22.33■■□□□ 1.17
IRF3-219ENST00000597636 KANK4Q5T7N3 995 aaPredicted RBP22.32■■□□□ 1.16
IRF3-219ENST00000597636 FANCD2Q9BXW9 1451 aa22.32■■□□□ 1.16
IRF3-219ENST00000597636 RRBP1Q9P2E9 1410 aaKnown RBP22.31■■□□□ 1.16
IRF3-219ENST00000597636 CUX2O14529 1486 aa22.3■■□□□ 1.16
IRF3-219ENST00000597636 ARAP1Q96P48 1450 aa22.29■■□□□ 1.16
IRF3-219ENST00000597636 KCNH8Q96L42 1107 aa22.26■■□□□ 1.15
IRF3-219ENST00000597636 TOP2BQ02880 1626 aa22.24■■□□□ 1.15
IRF3-219ENST00000597636 ERICH3Q5RHP9 1530 aa22.24■■□□□ 1.15
IRF3-219ENST00000597636 PRXQ9BXM0 1461 aa22.22■■□□□ 1.15
IRF3-219ENST00000597636 CCNB3Q8WWL7 1395 aa22.19■■□□□ 1.14
IRF3-219ENST00000597636 BCANQ96GW7 911 aa22.17■■□□□ 1.14
IRF3-219ENST00000597636 FKBP8Q14318 412 aa22.15■■□□□ 1.14
IRF3-219ENST00000597636 BCL11AQ9H165 835 aa22.14■■□□□ 1.13
IRF3-219ENST00000597636 BIVM-ERCC5R4GMW8 1640 aa22.12■■□□□ 1.13
IRF3-219ENST00000597636 FGD5Q6ZNL6 1462 aa22.12■■□□□ 1.13
IRF3-219ENST00000597636 PRDM2Q13029 1718 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms