RNA–Protein interactions for RNA: ENST00000308664.10

ATP2A2-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-201ENST00000308664 DCAF8L2P0C7V8 631 aa32.37■■■□□ 2.77
ATP2A2-201ENST00000308664 NISCHQ9Y2I1 1504 aa31.22■■■□□ 2.59
ATP2A2-201ENST00000308664 SUPT5HO00267 1087 aaKnown RBP30.55■■■□□ 2.48
ATP2A2-201ENST00000308664 SHROOM4Q9ULL8 1493 aa30.3■■■□□ 2.44
ATP2A2-201ENST00000308664 EHMT2Q96KQ7 1210 aa29.62■■■□□ 2.33
ATP2A2-201ENST00000308664 PCGF6Q9BYE7 350 aa29.13■■■□□ 2.25
ATP2A2-201ENST00000308664 FAM9AQ8IZU1 332 aaPredicted RBP28.84■■■□□ 2.21
ATP2A2-201ENST00000308664 TTBK1Q5TCY1 1321 aaPredicted RBP28.46■■■□□ 2.15
ATP2A2-201ENST00000308664 RANGAP1P46060 587 aaPredicted RBP28.3■■■□□ 2.12
ATP2A2-201ENST00000308664 HRCP23327 699 aa28.22■■■□□ 2.11
ATP2A2-201ENST00000308664 PELP1Q8IZL8 1130 aaKnown RBP28.2■■■□□ 2.11
ATP2A2-201ENST00000308664 APLP2Q06481 763 aa28.19■■■□□ 2.1
ATP2A2-201ENST00000308664 ZEB1P37275 1124 aaPredicted RBP28.09■■■□□ 2.09
ATP2A2-201ENST00000308664 TRIM41Q8WV44 630 aa28.08■■■□□ 2.09
ATP2A2-201ENST00000308664 CENPBP07199 599 aaPredicted RBP28.01■■■□□ 2.07
ATP2A2-201ENST00000308664 CCER1Q8TC90 406 aaPredicted RBP27.9■■■□□ 2.06
ATP2A2-201ENST00000308664 PPARGC1BQ86YN6 1023 aaKnown RBP27.89■■■□□ 2.05
ATP2A2-201ENST00000308664 ATP1B4Q9UN42 357 aaPredicted RBP27.77■■■□□ 2.04
ATP2A2-201ENST00000308664 UBTFP17480 764 aaKnown RBP27.71■■■□□ 2.03
ATP2A2-201ENST00000308664 TRIM26Q12899 539 aaPredicted RBP27.69■■■□□ 2.02
ATP2A2-201ENST00000308664 LOC105371045A0A1W2PR82 267 aa27.63■■■□□ 2.01
ATP2A2-201ENST00000308664 CHIC1Q5VXU3 224 aa27.63■■■□□ 2.01
ATP2A2-201ENST00000308664 YTHDC1Q96MU7 727 aaKnown RBP27.61■■■□□ 2.01
ATP2A2-201ENST00000308664 MYT1Q01538 1121 aa27.48■■□□□ 1.99
ATP2A2-201ENST00000308664 ABCC9O60706 1549 aa27.27■■□□□ 1.96
ATP2A2-201ENST00000308664 PABPN1Q86U42 306 aaKnown RBP eCLIP27.24■■□□□ 1.95
ATP2A2-201ENST00000308664 ERICH6Q7L0X2 663 aa27.13■■□□□ 1.93
ATP2A2-201ENST00000308664 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.96■■□□□ 1.91
ATP2A2-201ENST00000308664 ITGAEP38570 1179 aa26.92■■□□□ 1.9
ATP2A2-201ENST00000308664 NEFLP07196 543 aa26.88■■□□□ 1.89
ATP2A2-201ENST00000308664 DIEXFQ68CQ4 756 aaKnown RBP26.86■■□□□ 1.89
ATP2A2-201ENST00000308664 HNRNPUL2Q1KMD3 747 aaKnown RBP26.82■■□□□ 1.88
ATP2A2-201ENST00000308664 GTF3C3Q9Y5Q9 886 aa26.75■■□□□ 1.87
ATP2A2-201ENST00000308664 MYT1LQ9UL68 1186 aa26.53■■□□□ 1.84
ATP2A2-201ENST00000308664 ACIN1Q9UKV3 1341 aaKnown RBP26.45■■□□□ 1.82
ATP2A2-201ENST00000308664 CNGB1Q14028 1251 aaPredicted RBP26.33■■□□□ 1.81
ATP2A2-201ENST00000308664 POLR3GLQ9BT43 218 aa26.32■■□□□ 1.8
ATP2A2-201ENST00000308664 SCAF1Q9H7N4 1312 aaKnown RBP26.2■■□□□ 1.78
ATP2A2-201ENST00000308664 FBLN2P98095 1184 aa26.17■■□□□ 1.78
ATP2A2-201ENST00000308664 BCANQ96GW7 911 aa26.16■■□□□ 1.78
ATP2A2-201ENST00000308664 ZNF316A6NFI3 1004 aaPredicted RBP26.14■■□□□ 1.78
ATP2A2-201ENST00000308664 FAM50AQ14320 339 aaKnown RBP26.11■■□□□ 1.77
ATP2A2-201ENST00000308664 NEUROD1Q13562 356 aa26.1■■□□□ 1.77
ATP2A2-201ENST00000308664 P3H3Q8IVL6 736 aa26.02■■□□□ 1.76
ATP2A2-201ENST00000308664 ARID3CA6NKF2 412 aa26.01■■□□□ 1.75
ATP2A2-201ENST00000308664 DCAF1Q9Y4B6 1507 aa26■■□□□ 1.75
ATP2A2-201ENST00000308664 SCRIBQ14160 1630 aa25.91■■□□□ 1.74
ATP2A2-201ENST00000308664 MYO15BQ96JP2 1530 aa25.91■■□□□ 1.74
ATP2A2-201ENST00000308664 CSRNP3Q8WYN3 585 aa25.85■■□□□ 1.73
ATP2A2-201ENST00000308664 TRIM52Q96A61 297 aa25.85■■□□□ 1.73
ATP2A2-201ENST00000308664 ZCCHC6Q5VYS8 1495 aaKnown RBP25.76■■□□□ 1.71
ATP2A2-201ENST00000308664 SLC4A1APQ9BWU0 796 aaKnown RBP25.73■■□□□ 1.71
ATP2A2-201ENST00000308664 DAXXQ9UER7 740 aaPredicted RBP25.72■■□□□ 1.71
ATP2A2-201ENST00000308664 RTL5Q5HYW3 569 aaPredicted RBP25.69■■□□□ 1.7
ATP2A2-201ENST00000308664 ZNF326Q5BKZ1 582 aaKnown RBP25.64■■□□□ 1.7
ATP2A2-201ENST00000308664 ANP32CO43423 234 aa25.57■■□□□ 1.68
ATP2A2-201ENST00000308664 CDK11AQ9UQ88 783 aaPredicted RBP25.56■■□□□ 1.68
ATP2A2-201ENST00000308664 MIER1Q8N108 512 aa25.53■■□□□ 1.68
ATP2A2-201ENST00000308664 ZNF777Q9ULD5 760 aaPredicted RBP25.5■■□□□ 1.67
ATP2A2-201ENST00000308664 FKBP8Q14318 412 aa25.48■■□□□ 1.67
ATP2A2-201ENST00000308664 CLSPNQ9HAW4 1339 aa25.32■■□□□ 1.64
ATP2A2-201ENST00000308664 DDX10Q13206 875 aaKnown RBP25.27■■□□□ 1.64
ATP2A2-201ENST00000308664 CCDC180Q9P1Z9 1646 aa25.21■■□□□ 1.63
ATP2A2-201ENST00000308664 CHIC2Q9UKJ5 165 aa25.14■■□□□ 1.61
ATP2A2-201ENST00000308664 RSF1Q96T23 1441 aaPredicted RBP25.14■■□□□ 1.61
ATP2A2-201ENST00000308664 HNRNPUQ00839 825 aaKnown RBP eCLIP25.11■■□□□ 1.611e-6■□□□□ 8.3
ATP2A2-201ENST00000308664 PLPPR3Q6T4P5 718 aa25.05■■□□□ 1.6
ATP2A2-201ENST00000308664 ANP32AP39687 249 aaKnown RBP25.05■■□□□ 1.6
ATP2A2-201ENST00000308664 NPM2Q86SE8 214 aaKnown RBP25.02■■□□□ 1.6
ATP2A2-201ENST00000308664 RB1CC1Q8TDY2 1594 aa25■■□□□ 1.59
ATP2A2-201ENST00000308664 CHMP7Q8WUX9 453 aaPredicted RBP24.99■■□□□ 1.59
ATP2A2-201ENST00000308664 HIRIP3Q9BW71 556 aaPredicted RBP24.98■■□□□ 1.59
ATP2A2-201ENST00000308664 IRX6P78412 446 aaPredicted RBP24.97■■□□□ 1.59
ATP2A2-201ENST00000308664 ANP32EQ9BTT0 268 aa24.97■■□□□ 1.59
ATP2A2-201ENST00000308664 CHGAP10645 457 aaKnown RBP24.96■■□□□ 1.59
ATP2A2-201ENST00000308664 NBR1Q14596 966 aa24.94■■□□□ 1.58
ATP2A2-201ENST00000308664 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.92■■□□□ 1.581e-6■■■□□ 15.1
ATP2A2-201ENST00000308664 FAM9BQ8IZU0 186 aa24.92■■□□□ 1.58
ATP2A2-201ENST00000308664 NPM1P06748 294 aaKnown RBP eCLIP24.9■■□□□ 1.58
ATP2A2-201ENST00000308664 CECR2Q9BXF3 1484 aa24.88■■□□□ 1.57
ATP2A2-201ENST00000308664 BCL11AQ9H165 835 aa24.86■■□□□ 1.57
ATP2A2-201ENST00000308664 TONSLQ96HA7 1378 aa24.86■■□□□ 1.57
ATP2A2-201ENST00000308664 EIF5BO60841 1220 aaKnown RBP24.84■■□□□ 1.57
ATP2A2-201ENST00000308664 SUPT16HQ9Y5B9 1047 aaKnown RBP24.82■■□□□ 1.56
ATP2A2-201ENST00000308664 CLIP1P30622 1438 aa24.8■■□□□ 1.56
ATP2A2-201ENST00000308664 SLC24A1O60721 1099 aa24.8■■□□□ 1.56
ATP2A2-201ENST00000308664 SENP3Q9H4L4 574 aaPredicted RBP24.8■■□□□ 1.56
ATP2A2-201ENST00000308664 CEP162Q5TB80 1403 aa24.79■■□□□ 1.56
ATP2A2-201ENST00000308664 KCNH8Q96L42 1107 aa24.79■■□□□ 1.56
ATP2A2-201ENST00000308664 MTUS2Q5JR59 1369 aa24.79■■□□□ 1.56
ATP2A2-201ENST00000308664 ESF1Q9H501 851 aaKnown RBP24.76■■□□□ 1.56
ATP2A2-201ENST00000308664 BAZ1BQ9UIG0 1483 aaKnown RBP24.74■■□□□ 1.55
ATP2A2-201ENST00000308664 NACADO15069 1562 aa24.74■■□□□ 1.55
ATP2A2-201ENST00000308664 WRNQ14191 1432 aaPredicted RBP eCLIP24.74■■□□□ 1.55
ATP2A2-201ENST00000308664 RRP7BPQ9NSQ0 103 aa24.73■■□□□ 1.55
ATP2A2-201ENST00000308664 KDM2AQ9Y2K7 1162 aa24.72■■□□□ 1.55
ATP2A2-201ENST00000308664 CCDC136Q96JN2 1154 aa24.72■■□□□ 1.55
ATP2A2-201ENST00000308664 TSPY4P0CV99 314 aa24.71■■□□□ 1.55
ATP2A2-201ENST00000308664 TSPY10P0CW01 314 aa24.71■■□□□ 1.55
ATP2A2-201ENST00000308664 STAG3Q9UJ98 1225 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 758.5 ms