RNA–Protein interactions for RNA: ENST00000313432.5

ATP2A2-202, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

TSL 1 (best)

Gene ATP2A2, Length 5,575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-202ENST00000313432 NISCHQ9Y2I1 1504 aa17.7■□□□□ 0.42
ATP2A2-202ENST00000313432 CCDC180Q9P1Z9 1646 aa15.38■□□□□ 0.05
ATP2A2-202ENST00000313432 DCAF8L2P0C7V8 631 aa15.21■□□□□ 0.03
ATP2A2-202ENST00000313432 ZCCHC6Q5VYS8 1495 aaKnown RBP14.82□□□□□ -0.04
ATP2A2-202ENST00000313432 ABCC9O60706 1549 aa14.72□□□□□ -0.05
ATP2A2-202ENST00000313432 SHROOM4Q9ULL8 1493 aa14.71□□□□□ -0.05
ATP2A2-202ENST00000313432 DCAF1Q9Y4B6 1507 aa14.6□□□□□ -0.07
ATP2A2-202ENST00000313432 NACADO15069 1562 aa14.46□□□□□ -0.09
ATP2A2-202ENST00000313432 MYO15BQ96JP2 1530 aa14.43□□□□□ -0.1
ATP2A2-202ENST00000313432 RB1CC1Q8TDY2 1594 aa14.39□□□□□ -0.11
ATP2A2-202ENST00000313432 SUPT5HO00267 1087 aaKnown RBP14.34□□□□□ -0.11
ATP2A2-202ENST00000313432 PELP1Q8IZL8 1130 aaKnown RBP14.26□□□□□ -0.13
ATP2A2-202ENST00000313432 SCRIBQ14160 1630 aa14.23□□□□□ -0.13
ATP2A2-202ENST00000313432 PABPN1Q86U42 306 aaKnown RBP eCLIP13.96□□□□□ -0.17
ATP2A2-202ENST00000313432 BAZ1AQ9NRL2 1556 aaPredicted RBP13.78□□□□□ -0.2
ATP2A2-202ENST00000313432 MYT1Q01538 1121 aa13.76□□□□□ -0.21
ATP2A2-202ENST00000313432 RSF1Q96T23 1441 aaPredicted RBP13.75□□□□□ -0.21
ATP2A2-202ENST00000313432 CECR2Q9BXF3 1484 aa13.67□□□□□ -0.22
ATP2A2-202ENST00000313432 MROH2BQ7Z745 1585 aa13.6□□□□□ -0.23
ATP2A2-202ENST00000313432 UNC13AQ9UPW8 1703 aa13.6□□□□□ -0.23
ATP2A2-202ENST00000313432 ERICH6Q7L0X2 663 aa13.58□□□□□ -0.24
ATP2A2-202ENST00000313432 SMARCA4P51532 1647 aa13.57□□□□□ -0.24
ATP2A2-202ENST00000313432 BICRAQ9NZM4 1560 aa13.56□□□□□ -0.24
ATP2A2-202ENST00000313432 CCER1Q8TC90 406 aaPredicted RBP13.55□□□□□ -0.24
ATP2A2-202ENST00000313432 TRIM41Q8WV44 630 aa13.55□□□□□ -0.24
ATP2A2-202ENST00000313432 SMARCA2P51531 1590 aa13.54□□□□□ -0.24
ATP2A2-202ENST00000313432 CHIC1Q5VXU3 224 aa13.51□□□□□ -0.25
ATP2A2-202ENST00000313432 BAZ1BQ9UIG0 1483 aaKnown RBP13.5□□□□□ -0.25
ATP2A2-202ENST00000313432 TOP2AP11388 1531 aaKnown RBP13.46□□□□□ -0.25
ATP2A2-202ENST00000313432 WIZO95785 1651 aa13.46□□□□□ -0.25
ATP2A2-202ENST00000313432 ATAD2BQ9ULI0 1458 aa13.4□□□□□ -0.26
ATP2A2-202ENST00000313432 EIF4G1Q04637 1599 aaKnown RBP13.37□□□□□ -0.27
ATP2A2-202ENST00000313432 CCDC88BA6NC98 1476 aa13.31□□□□□ -0.28
ATP2A2-202ENST00000313432 NCAPD3P42695 1498 aa13.3□□□□□ -0.28
ATP2A2-202ENST00000313432 PEG3Q9GZU2 1588 aa13.3□□□□□ -0.28
ATP2A2-202ENST00000313432 YTHDC1Q96MU7 727 aaKnown RBP13.29□□□□□ -0.28
ATP2A2-202ENST00000313432 FAM9AQ8IZU1 332 aaPredicted RBP13.27□□□□□ -0.29
ATP2A2-202ENST00000313432 HMGXB3Q12766 1538 aa13.26□□□□□ -0.29
ATP2A2-202ENST00000313432 CC2D2AQ9P2K1 1620 aa13.16□□□□□ -0.3
ATP2A2-202ENST00000313432 TTBK1Q5TCY1 1321 aaPredicted RBP13.13□□□□□ -0.31
ATP2A2-202ENST00000313432 WRNQ14191 1432 aaPredicted RBP eCLIP13.13□□□□□ -0.31
ATP2A2-202ENST00000313432 EHMT2Q96KQ7 1210 aa13.1□□□□□ -0.31
ATP2A2-202ENST00000313432 CADPSQ9ULU8 1353 aa13.08□□□□□ -0.32
ATP2A2-202ENST00000313432 EEA1Q15075 1411 aa13.07□□□□□ -0.32
ATP2A2-202ENST00000313432 UBTFP17480 764 aaKnown RBP13.07□□□□□ -0.32
ATP2A2-202ENST00000313432 PDS5BQ9NTI5 1447 aa13.01□□□□□ -0.33
ATP2A2-202ENST00000313432 CSRNP3Q8WYN3 585 aa13.01□□□□□ -0.33
ATP2A2-202ENST00000313432 CFTRP13569 1480 aa12.99□□□□□ -0.33
ATP2A2-202ENST00000313432 LOC105371045A0A1W2PR82 267 aa12.99□□□□□ -0.33
ATP2A2-202ENST00000313432 ABCC8Q09428 1581 aa12.98□□□□□ -0.33
ATP2A2-202ENST00000313432 APLP2Q06481 763 aa12.97□□□□□ -0.33
ATP2A2-202ENST00000313432 FANCD2Q9BXW9 1451 aa12.91□□□□□ -0.34
ATP2A2-202ENST00000313432 CEP164Q9UPV0 1460 aa12.91□□□□□ -0.34
ATP2A2-202ENST00000313432 KIF27Q86VH2 1401 aa12.9□□□□□ -0.34
ATP2A2-202ENST00000313432 CENPBP07199 599 aaPredicted RBP12.9□□□□□ -0.34
ATP2A2-202ENST00000313432 LAMC3Q9Y6N6 1575 aa12.88□□□□□ -0.35
ATP2A2-202ENST00000313432 ERCC6Q03468 1493 aa12.87□□□□□ -0.35
ATP2A2-202ENST00000313432 GOLGA3Q08378 1498 aa12.84□□□□□ -0.35
ATP2A2-202ENST00000313432 TOP2BQ02880 1626 aa12.81□□□□□ -0.36
ATP2A2-202ENST00000313432 RANGAP1P46060 587 aaPredicted RBP12.81□□□□□ -0.36
ATP2A2-202ENST00000313432 SOGA1O94964 1423 aa12.81□□□□□ -0.36
ATP2A2-202ENST00000313432 PCGF6Q9BYE7 350 aa12.79□□□□□ -0.36
ATP2A2-202ENST00000313432 SYNJ1O43426 1573 aa12.78□□□□□ -0.36
ATP2A2-202ENST00000313432 CUX2O14529 1486 aa12.78□□□□□ -0.36
ATP2A2-202ENST00000313432 PRDM2Q13029 1718 aa12.76□□□□□ -0.37
ATP2A2-202ENST00000313432 TNIKQ9UKE5 1360 aa12.76□□□□□ -0.37
ATP2A2-202ENST00000313432 DAXXQ9UER7 740 aaPredicted RBP12.75□□□□□ -0.37
ATP2A2-202ENST00000313432 NESP48681 1621 aa12.75□□□□□ -0.37
ATP2A2-202ENST00000313432 NEFLP07196 543 aa12.75□□□□□ -0.37
ATP2A2-202ENST00000313432 CUX1P39880 1505 aa12.73□□□□□ -0.37
ATP2A2-202ENST00000313432 DNMBPQ6XZF7 1577 aa12.73□□□□□ -0.37
ATP2A2-202ENST00000313432 FGD5Q6ZNL6 1462 aa12.73□□□□□ -0.37
ATP2A2-202ENST00000313432 BIVM-ERCC5R4GMW8 1640 aa12.73□□□□□ -0.37
ATP2A2-202ENST00000313432 DNAJC5BQ9UF47 199 aa12.71□□□□□ -0.37
ATP2A2-202ENST00000313432 MRC2Q9UBG0 1479 aa12.7□□□□□ -0.38
ATP2A2-202ENST00000313432 TOPBP1Q92547 1522 aa12.69□□□□□ -0.38
ATP2A2-202ENST00000313432 TRIM26Q12899 539 aaPredicted RBP12.68□□□□□ -0.38
ATP2A2-202ENST00000313432 CARMIL1Q5VZK9 1371 aa12.68□□□□□ -0.38
ATP2A2-202ENST00000313432 CEP162Q5TB80 1403 aa12.66□□□□□ -0.38
ATP2A2-202ENST00000313432 CLIP1P30622 1438 aa12.65□□□□□ -0.38
ATP2A2-202ENST00000313432 HRCP23327 699 aa12.65□□□□□ -0.38
ATP2A2-202ENST00000313432 ATP1B4Q9UN42 357 aaPredicted RBP12.64□□□□□ -0.39
ATP2A2-202ENST00000313432 RUSC2Q8N2Y8 1516 aa12.63□□□□□ -0.39
ATP2A2-202ENST00000313432 KIF21BO75037 1637 aa12.63□□□□□ -0.39
ATP2A2-202ENST00000313432 RAPGEF2Q9Y4G8 1499 aa12.62□□□□□ -0.39
ATP2A2-202ENST00000313432 POLA1P09884 1462 aaPredicted RBP12.61□□□□□ -0.39
ATP2A2-202ENST00000313432 ERICH3Q5RHP9 1530 aa12.6□□□□□ -0.39
ATP2A2-202ENST00000313432 FBLN2P98095 1184 aa12.59□□□□□ -0.39
ATP2A2-202ENST00000313432 TDRD9Q8NDG6 1382 aaKnown RBP12.59□□□□□ -0.39
ATP2A2-202ENST00000313432 ABCA10Q8WWZ4 1543 aa12.59□□□□□ -0.39
ATP2A2-202ENST00000313432 IFT140Q96RY7 1462 aa12.58□□□□□ -0.39
ATP2A2-202ENST00000313432 RAD54L2Q9Y4B4 1467 aa12.58□□□□□ -0.39
ATP2A2-202ENST00000313432 GAPVD1Q14C86 1478 aa12.58□□□□□ -0.4
ATP2A2-202ENST00000313432 CHMP7Q8WUX9 453 aaPredicted RBP12.57□□□□□ -0.4
ATP2A2-202ENST00000313432 IGF1RP08069 1367 aa12.57□□□□□ -0.4
ATP2A2-202ENST00000313432 URB2Q14146 1524 aaKnown RBP12.57□□□□□ -0.4
ATP2A2-202ENST00000313432 ZEB1P37275 1124 aaPredicted RBP12.56□□□□□ -0.4
ATP2A2-202ENST00000313432 PRXQ9BXM0 1461 aa12.53□□□□□ -0.4
ATP2A2-202ENST00000313432 KIF21AQ7Z4S6 1674 aa12.52□□□□□ -0.41
ATP2A2-202ENST00000313432 PPARGC1BQ86YN6 1023 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms