RNA–Protein interactions for RNA: ENST00000371189.8

NFIA-205, Transcript of nuclear factor I A, humanhuman

TSL 2 BASIC

Gene NFIA, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-205ENST00000371189 NISCHQ9Y2I1 1504 aa37.65■■■■□ 3.62
NFIA-205ENST00000371189 CCDC180Q9P1Z9 1646 aa33.17■■■□□ 2.9
NFIA-205ENST00000371189 ABCC9O60706 1549 aa32.25■■■□□ 2.75
NFIA-205ENST00000371189 DCAF8L2P0C7V8 631 aa31.49■■■□□ 2.63
NFIA-205ENST00000371189 ZCCHC6Q5VYS8 1495 aaKnown RBP31.45■■■□□ 2.62
NFIA-205ENST00000371189 NACADO15069 1562 aa31.16■■■□□ 2.58
NFIA-205ENST00000371189 DCAF1Q9Y4B6 1507 aa31.11■■■□□ 2.57
NFIA-205ENST00000371189 RB1CC1Q8TDY2 1594 aa31.1■■■□□ 2.57
NFIA-205ENST00000371189 MYO15BQ96JP2 1530 aa31.08■■■□□ 2.57
NFIA-205ENST00000371189 SCRIBQ14160 1630 aa30.43■■■□□ 2.46
NFIA-205ENST00000371189 UNC13AQ9UPW8 1703 aa30.31■■■□□ 2.44
NFIA-205ENST00000371189 PABPN1Q86U42 306 aaKnown RBP eCLIP30.29■■■□□ 2.44
NFIA-205ENST00000371189 SHROOM4Q9ULL8 1493 aa30.15■■■□□ 2.42
NFIA-205ENST00000371189 BICRAQ9NZM4 1560 aa30.15■■■□□ 2.42
NFIA-205ENST00000371189 CECR2Q9BXF3 1484 aa29.35■■■□□ 2.29
NFIA-205ENST00000371189 EIF4G1Q04637 1599 aaKnown RBP29.34■■■□□ 2.29
NFIA-205ENST00000371189 DNAJC5BQ9UF47 199 aa29.28■■■□□ 2.28
NFIA-205ENST00000371189 BAZ1AQ9NRL2 1556 aaPredicted RBP29.14■■■□□ 2.26
NFIA-205ENST00000371189 CC2D2AQ9P2K1 1620 aa29.12■■■□□ 2.25
NFIA-205ENST00000371189 SMARCA4P51532 1647 aa29.09■■■□□ 2.25
NFIA-205ENST00000371189 MROH2BQ7Z745 1585 aa29.06■■■□□ 2.24
NFIA-205ENST00000371189 RSF1Q96T23 1441 aaPredicted RBP28.9■■■□□ 2.22
NFIA-205ENST00000371189 ATAD2BQ9ULI0 1458 aa28.89■■■□□ 2.22
NFIA-205ENST00000371189 SMARCA2P51531 1590 aa28.83■■■□□ 2.21
NFIA-205ENST00000371189 NCAPD3P42695 1498 aa28.79■■■□□ 2.2
NFIA-205ENST00000371189 PEG3Q9GZU2 1588 aa28.78■■■□□ 2.2
NFIA-205ENST00000371189 WIZO95785 1651 aa28.73■■■□□ 2.19
NFIA-205ENST00000371189 BAZ1BQ9UIG0 1483 aaKnown RBP28.68■■■□□ 2.18
NFIA-205ENST00000371189 HMGXB3Q12766 1538 aa28.64■■■□□ 2.18
NFIA-205ENST00000371189 SUPT5HO00267 1087 aaKnown RBP28.6■■■□□ 2.17
NFIA-205ENST00000371189 TOP2AP11388 1531 aaKnown RBP28.43■■■□□ 2.14
NFIA-205ENST00000371189 CCDC88BA6NC98 1476 aa28.16■■■□□ 2.1
NFIA-205ENST00000371189 NESP48681 1621 aa28.03■■■□□ 2.08
NFIA-205ENST00000371189 CADPSQ9ULU8 1353 aa28.02■■■□□ 2.08
NFIA-205ENST00000371189 LAMC3Q9Y6N6 1575 aa27.92■■■□□ 2.06
NFIA-205ENST00000371189 CFTRP13569 1480 aa27.91■■■□□ 2.06
NFIA-205ENST00000371189 PDS5BQ9NTI5 1447 aa27.79■■■□□ 2.04
NFIA-205ENST00000371189 ERCC6Q03468 1493 aa27.77■■■□□ 2.04
NFIA-205ENST00000371189 FANCD2Q9BXW9 1451 aa27.69■■■□□ 2.02
NFIA-205ENST00000371189 CEP164Q9UPV0 1460 aa27.59■■■□□ 2.01
NFIA-205ENST00000371189 KIF21AQ7Z4S6 1674 aa27.59■■■□□ 2.01
NFIA-205ENST00000371189 PRDM2Q13029 1718 aa27.54■■■□□ 2
NFIA-205ENST00000371189 MRC2Q9UBG0 1479 aa27.46■■□□□ 1.99
NFIA-205ENST00000371189 THOC2Q8NI27 1593 aaKnown RBP27.41■■□□□ 1.98
NFIA-205ENST00000371189 URB2Q14146 1524 aaKnown RBP27.37■■□□□ 1.97
NFIA-205ENST00000371189 WDR62O43379 1518 aa27.32■■□□□ 1.96
NFIA-205ENST00000371189 TOPBP1Q92547 1522 aa27.27■■□□□ 1.96
NFIA-205ENST00000371189 ABCC8Q09428 1581 aa27.26■■□□□ 1.95
NFIA-205ENST00000371189 CUX2O14529 1486 aa27.24■■□□□ 1.95
NFIA-205ENST00000371189 WRNQ14191 1432 aaPredicted RBP eCLIP27.23■■□□□ 1.95
NFIA-205ENST00000371189 DNMBPQ6XZF7 1577 aa27.23■■□□□ 1.95
NFIA-205ENST00000371189 CUX1P39880 1505 aa27.22■■□□□ 1.95
NFIA-205ENST00000371189 SYNJ1O43426 1573 aa27.1■■□□□ 1.93
NFIA-205ENST00000371189 POLA1P09884 1462 aaPredicted RBP27.08■■□□□ 1.93
NFIA-205ENST00000371189 FGD5Q6ZNL6 1462 aa27.08■■□□□ 1.93
NFIA-205ENST00000371189 TOP2BQ02880 1626 aa27.05■■□□□ 1.92
NFIA-205ENST00000371189 SOGA1O94964 1423 aa27.01■■□□□ 1.91
NFIA-205ENST00000371189 BIVM-ERCC5R4GMW8 1640 aa27.01■■□□□ 1.91
NFIA-205ENST00000371189 RAD54L2Q9Y4B4 1467 aa27■■□□□ 1.91
NFIA-205ENST00000371189 IFT140Q96RY7 1462 aa26.99■■□□□ 1.91
NFIA-205ENST00000371189 TRIM41Q8WV44 630 aa26.95■■□□□ 1.91
NFIA-205ENST00000371189 TARBP1Q13395 1621 aaKnown RBP26.89■■□□□ 1.9
NFIA-205ENST00000371189 ZNF608Q9ULD9 1512 aaPredicted RBP26.88■■□□□ 1.89
NFIA-205ENST00000371189 CHIC1Q5VXU3 224 aa26.88■■□□□ 1.89
NFIA-205ENST00000371189 TDRD9Q8NDG6 1382 aaKnown RBP26.85■■□□□ 1.89
NFIA-205ENST00000371189 ABCA10Q8WWZ4 1543 aa26.81■■□□□ 1.88
NFIA-205ENST00000371189 AQRO60306 1485 aaKnown RBP eCLIP26.8■■□□□ 1.881e-7■■□□□ 12.1
NFIA-205ENST00000371189 EIF4G3O43432 1585 aaKnown RBP26.72■■□□□ 1.87
NFIA-205ENST00000371189 WDR97A6NE52 1622 aa26.71■■□□□ 1.87
NFIA-205ENST00000371189 GAPVD1Q14C86 1478 aa26.68■■□□□ 1.86
NFIA-205ENST00000371189 KIF27Q86VH2 1401 aa26.63■■□□□ 1.85
NFIA-205ENST00000371189 ABCA5Q8WWZ7 1642 aa26.62■■□□□ 1.85
NFIA-205ENST00000371189 GRIN2BQ13224 1484 aa26.61■■□□□ 1.85
NFIA-205ENST00000371189 RUSC2Q8N2Y8 1516 aa26.54■■□□□ 1.84
NFIA-205ENST00000371189 SNAPC4Q5SXM2 1469 aa26.53■■□□□ 1.84
NFIA-205ENST00000371189 IGF1RP08069 1367 aa26.49■■□□□ 1.83
NFIA-205ENST00000371189 PBRM1Q86U86 1689 aa26.48■■□□□ 1.83
NFIA-205ENST00000371189 ERICH3Q5RHP9 1530 aa26.48■■□□□ 1.83
NFIA-205ENST00000371189 FBLN2P98095 1184 aa26.47■■□□□ 1.83
NFIA-205ENST00000371189 MAGI1Q96QZ7 1491 aaPredicted RBP26.47■■□□□ 1.83
NFIA-205ENST00000371189 FAM9AQ8IZU1 332 aaPredicted RBP26.44■■□□□ 1.82
NFIA-205ENST00000371189 CHMP7Q8WUX9 453 aaPredicted RBP26.43■■□□□ 1.82
NFIA-205ENST00000371189 FHAD1B1AJZ9 1412 aa26.39■■□□□ 1.81
NFIA-205ENST00000371189 SYNJ2O15056 1496 aa26.38■■□□□ 1.81
NFIA-205ENST00000371189 EEA1Q15075 1411 aa26.36■■□□□ 1.81
NFIA-205ENST00000371189 CSRNP3Q8WYN3 585 aa26.35■■□□□ 1.81
NFIA-205ENST00000371189 ADAMTS12P58397 1594 aa26.35■■□□□ 1.81
NFIA-205ENST00000371189 CARMIL1Q5VZK9 1371 aa26.35■■□□□ 1.81
NFIA-205ENST00000371189 OSCARQ8IYS5 282 aa26.3■■□□□ 1.8
NFIA-205ENST00000371189 CUL7Q14999 1698 aa26.28■■□□□ 1.8
NFIA-205ENST00000371189 GRIN2AQ12879 1464 aa26.27■■□□□ 1.8
NFIA-205ENST00000371189 CHD1O14646 1710 aa26.25■■□□□ 1.79
NFIA-205ENST00000371189 PRXQ9BXM0 1461 aa26.21■■□□□ 1.79
NFIA-205ENST00000371189 RAPGEF2Q9Y4G8 1499 aa26.2■■□□□ 1.78
NFIA-205ENST00000371189 NUP160Q12769 1436 aa26.13■■□□□ 1.77
NFIA-205ENST00000371189 EHMT2Q96KQ7 1210 aa26.11■■□□□ 1.77
NFIA-205ENST00000371189 CEP170Q5SW79 1584 aa26.09■■□□□ 1.77
NFIA-205ENST00000371189 CLASP1Q7Z460 1538 aa26.02■■□□□ 1.76
NFIA-205ENST00000371189 DNAJC5Q9H3Z4 198 aa26.02■■□□□ 1.76
NFIA-205ENST00000371189 KIF21BO75037 1637 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms