RNA–Protein interactions for RNA: ENST00000547206.5

NR4A1-208, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 4

Gene NR4A1, Length 570 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-208ENST00000547206 NISCHQ9Y2I1 1504 aa22.23■■□□□ 1.15
NR4A1-208ENST00000547206 CCDC180Q9P1Z9 1646 aa19.88■□□□□ 0.77
NR4A1-208ENST00000547206 ABCC9O60706 1549 aa19.62■□□□□ 0.73
NR4A1-208ENST00000547206 RB1CC1Q8TDY2 1594 aa18.81■□□□□ 0.6
NR4A1-208ENST00000547206 NACADO15069 1562 aa18.73■□□□□ 0.59
NR4A1-208ENST00000547206 DCAF8L2P0C7V8 631 aa18.65■□□□□ 0.58
NR4A1-208ENST00000547206 MYO15BQ96JP2 1530 aa18.55■□□□□ 0.56
NR4A1-208ENST00000547206 ZCCHC6Q5VYS8 1495 aaKnown RBP18.47■□□□□ 0.55
NR4A1-208ENST00000547206 UNC13AQ9UPW8 1703 aa18.41■□□□□ 0.54
NR4A1-208ENST00000547206 DCAF1Q9Y4B6 1507 aa18.4■□□□□ 0.54
NR4A1-208ENST00000547206 PABPN1Q86U42 306 aaKnown RBP eCLIP18.3■□□□□ 0.52
NR4A1-208ENST00000547206 BICRAQ9NZM4 1560 aa18.24■□□□□ 0.51
NR4A1-208ENST00000547206 DNAJC5BQ9UF47 199 aa18.2■□□□□ 0.5
NR4A1-208ENST00000547206 SCRIBQ14160 1630 aa18.1■□□□□ 0.49
NR4A1-208ENST00000547206 SHROOM4Q9ULL8 1493 aa18.03■□□□□ 0.48
NR4A1-208ENST00000547206 EIF4G1Q04637 1599 aaKnown RBP17.77■□□□□ 0.44
NR4A1-208ENST00000547206 CC2D2AQ9P2K1 1620 aa17.76■□□□□ 0.43
NR4A1-208ENST00000547206 CECR2Q9BXF3 1484 aa17.66■□□□□ 0.42
NR4A1-208ENST00000547206 SMARCA4P51532 1647 aa17.3■□□□□ 0.36
NR4A1-208ENST00000547206 NCAPD3P42695 1498 aa17.28■□□□□ 0.36
NR4A1-208ENST00000547206 ATAD2BQ9ULI0 1458 aa17.25■□□□□ 0.35
NR4A1-208ENST00000547206 BAZ1AQ9NRL2 1556 aaPredicted RBP17.25■□□□□ 0.35
NR4A1-208ENST00000547206 SMARCA2P51531 1590 aa17.23■□□□□ 0.35
NR4A1-208ENST00000547206 HMGXB3Q12766 1538 aa17.17■□□□□ 0.34
NR4A1-208ENST00000547206 PEG3Q9GZU2 1588 aa17.14■□□□□ 0.33
NR4A1-208ENST00000547206 MROH2BQ7Z745 1585 aa17.13■□□□□ 0.33
NR4A1-208ENST00000547206 BAZ1BQ9UIG0 1483 aaKnown RBP17.1■□□□□ 0.33
NR4A1-208ENST00000547206 WIZO95785 1651 aa16.95■□□□□ 0.3
NR4A1-208ENST00000547206 ERCC6Q03468 1493 aa16.93■□□□□ 0.3
NR4A1-208ENST00000547206 NESP48681 1621 aa16.92■□□□□ 0.3
NR4A1-208ENST00000547206 LAMC3Q9Y6N6 1575 aa16.87■□□□□ 0.29
NR4A1-208ENST00000547206 RSF1Q96T23 1441 aaPredicted RBP16.86■□□□□ 0.29
NR4A1-208ENST00000547206 CUX2O14529 1486 aa16.85■□□□□ 0.29
NR4A1-208ENST00000547206 CADPSQ9ULU8 1353 aa16.77■□□□□ 0.27
NR4A1-208ENST00000547206 PDS5BQ9NTI5 1447 aa16.76■□□□□ 0.27
NR4A1-208ENST00000547206 TOP2AP11388 1531 aaKnown RBP16.75■□□□□ 0.27
NR4A1-208ENST00000547206 KIF21AQ7Z4S6 1674 aa16.74■□□□□ 0.27
NR4A1-208ENST00000547206 THOC2Q8NI27 1593 aaKnown RBP16.72■□□□□ 0.27
NR4A1-208ENST00000547206 CFTRP13569 1480 aa16.62■□□□□ 0.25
NR4A1-208ENST00000547206 MRC2Q9UBG0 1479 aa16.59■□□□□ 0.25
NR4A1-208ENST00000547206 DNAJC5Q9H3Z4 198 aa16.58■□□□□ 0.24
NR4A1-208ENST00000547206 CEP164Q9UPV0 1460 aa16.57■□□□□ 0.24
NR4A1-208ENST00000547206 FANCD2Q9BXW9 1451 aa16.56■□□□□ 0.24
NR4A1-208ENST00000547206 WDR62O43379 1518 aa16.55■□□□□ 0.24
NR4A1-208ENST00000547206 CCDC88BA6NC98 1476 aa16.54■□□□□ 0.24
NR4A1-208ENST00000547206 PRDM2Q13029 1718 aa16.52■□□□□ 0.24
NR4A1-208ENST00000547206 URB2Q14146 1524 aaKnown RBP16.41■□□□□ 0.22
NR4A1-208ENST00000547206 ABCC8Q09428 1581 aa16.29■□□□□ 0.2
NR4A1-208ENST00000547206 TOPBP1Q92547 1522 aa16.28■□□□□ 0.2
NR4A1-208ENST00000547206 SUPT5HO00267 1087 aaKnown RBP16.26■□□□□ 0.19
NR4A1-208ENST00000547206 DNMBPQ6XZF7 1577 aa16.25■□□□□ 0.19
NR4A1-208ENST00000547206 IFT140Q96RY7 1462 aa16.23■□□□□ 0.19
NR4A1-208ENST00000547206 ZNF608Q9ULD9 1512 aaPredicted RBP16.16■□□□□ 0.18
NR4A1-208ENST00000547206 TARBP1Q13395 1621 aaKnown RBP16.12■□□□□ 0.17
NR4A1-208ENST00000547206 POLA1P09884 1462 aaPredicted RBP16.12■□□□□ 0.17
NR4A1-208ENST00000547206 OSCARQ8IYS5 282 aa16.11■□□□□ 0.17
NR4A1-208ENST00000547206 EIF4G3O43432 1585 aaKnown RBP16.1■□□□□ 0.17
NR4A1-208ENST00000547206 CUX1P39880 1505 aa16.08■□□□□ 0.16
NR4A1-208ENST00000547206 RAD54L2Q9Y4B4 1467 aa16.06■□□□□ 0.16
NR4A1-208ENST00000547206 SOGA1O94964 1423 aa16.06■□□□□ 0.16
NR4A1-208ENST00000547206 AQRO60306 1485 aaKnown RBP eCLIP16.05■□□□□ 0.16
NR4A1-208ENST00000547206 FGD5Q6ZNL6 1462 aa16.05■□□□□ 0.16
NR4A1-208ENST00000547206 WDR97A6NE52 1622 aa16.01■□□□□ 0.15
NR4A1-208ENST00000547206 TDRD9Q8NDG6 1382 aaKnown RBP15.99■□□□□ 0.15
NR4A1-208ENST00000547206 CHD1O14646 1710 aa15.97■□□□□ 0.15
NR4A1-208ENST00000547206 TRIM41Q8WV44 630 aa15.92■□□□□ 0.14
NR4A1-208ENST00000547206 SNAPC4Q5SXM2 1469 aa15.91■□□□□ 0.14
NR4A1-208ENST00000547206 BIVM-ERCC5R4GMW8 1640 aa15.9■□□□□ 0.14
NR4A1-208ENST00000547206 FBLN2P98095 1184 aa15.9■□□□□ 0.14
NR4A1-208ENST00000547206 WRNQ14191 1432 aaPredicted RBP eCLIP15.9■□□□□ 0.14
NR4A1-208ENST00000547206 GRIN2BQ13224 1484 aa15.9■□□□□ 0.14
NR4A1-208ENST00000547206 TOP2BQ02880 1626 aa15.9■□□□□ 0.14
NR4A1-208ENST00000547206 ABCA10Q8WWZ4 1543 aa15.89■□□□□ 0.13
NR4A1-208ENST00000547206 RIMBP3CA6NJZ7 1639 aa15.88■□□□□ 0.13
NR4A1-208ENST00000547206 RIMBP3BA6NNM3 1639 aa15.88■□□□□ 0.13
NR4A1-208ENST00000547206 RIMBP3Q9UFD9 1639 aa15.88■□□□□ 0.13
NR4A1-208ENST00000547206 MAGI1Q96QZ7 1491 aaPredicted RBP15.88■□□□□ 0.13
NR4A1-208ENST00000547206 PBRM1Q86U86 1689 aa15.88■□□□□ 0.13
NR4A1-208ENST00000547206 GAPVD1Q14C86 1478 aa15.87■□□□□ 0.13
NR4A1-208ENST00000547206 SYNJ1O43426 1573 aa15.87■□□□□ 0.13
NR4A1-208ENST00000547206 ABCA5Q8WWZ7 1642 aa15.85■□□□□ 0.13
NR4A1-208ENST00000547206 CHMP7Q8WUX9 453 aaPredicted RBP15.84■□□□□ 0.13
NR4A1-208ENST00000547206 ARHGEF11O15085 1522 aa15.84■□□□□ 0.13
NR4A1-208ENST00000547206 SYNJ2O15056 1496 aa15.82■□□□□ 0.12
NR4A1-208ENST00000547206 CLASP1Q7Z460 1538 aa15.77■□□□□ 0.11
NR4A1-208ENST00000547206 ADAMTS12P58397 1594 aa15.71■□□□□ 0.11
NR4A1-208ENST00000547206 CYB5RLQ6IPT4 315 aa15.71■□□□□ 0.11
NR4A1-208ENST00000547206 ERICH3Q5RHP9 1530 aa15.71■□□□□ 0.11
NR4A1-208ENST00000547206 ARAP1Q96P48 1450 aa15.7■□□□□ 0.1
NR4A1-208ENST00000547206 GRIN2AQ12879 1464 aa15.69■□□□□ 0.1
NR4A1-208ENST00000547206 FHAD1B1AJZ9 1412 aa15.68■□□□□ 0.1
NR4A1-208ENST00000547206 NUP160Q12769 1436 aa15.63■□□□□ 0.09
NR4A1-208ENST00000547206 CEP170Q5SW79 1584 aa15.62■□□□□ 0.09
NR4A1-208ENST00000547206 KIF27Q86VH2 1401 aa15.59■□□□□ 0.09
NR4A1-208ENST00000547206 SHROOM2Q13796 1616 aa15.55■□□□□ 0.08
NR4A1-208ENST00000547206 IGF1RP08069 1367 aa15.54■□□□□ 0.08
NR4A1-208ENST00000547206 CUL7Q14999 1698 aa15.53■□□□□ 0.08
NR4A1-208ENST00000547206 ERCC6L2Q5T890 1561 aa15.53■□□□□ 0.08
NR4A1-208ENST00000547206 RUSC2Q8N2Y8 1516 aa15.48■□□□□ 0.07
NR4A1-208ENST00000547206 JPH4Q96JJ6 628 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms