RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 NISCHQ9Y2I1 1504 aa48.47■■■■■ 5.35
IRF3-222ENST00000599144 ABCC9O60706 1549 aa43.94■■■■■ 4.63
IRF3-222ENST00000599144 CCDC180Q9P1Z9 1646 aa43.4■■■■■ 4.54
IRF3-222ENST00000599144 RB1CC1Q8TDY2 1594 aa41.51■■■■■ 4.24
IRF3-222ENST00000599144 DNAJC5BQ9UF47 199 aa41.5■■■■■ 4.23
IRF3-222ENST00000599144 DCAF8L2P0C7V8 631 aa41.24■■■■■ 4.19
IRF3-222ENST00000599144 NACADO15069 1562 aa41.16■■■■■ 4.18
IRF3-222ENST00000599144 PABPN1Q86U42 306 aaKnown RBP eCLIP40.97■■■■■ 4.152e-7■■■■□ 22.6
IRF3-222ENST00000599144 UNC13AQ9UPW8 1703 aa40.53■■■■■ 4.08
IRF3-222ENST00000599144 MYO15BQ96JP2 1530 aa40.44■■■■■ 4.06
IRF3-222ENST00000599144 BICRAQ9NZM4 1560 aa40.4■■■■■ 4.06
IRF3-222ENST00000599144 ZCCHC6Q5VYS8 1495 aaKnown RBP40.12■■■■■ 4.01
IRF3-222ENST00000599144 DCAF1Q9Y4B6 1507 aa39.88■■■■□ 3.97
IRF3-222ENST00000599144 SCRIBQ14160 1630 aa39.78■■■■□ 3.96
IRF3-222ENST00000599144 SHROOM4Q9ULL8 1493 aa39.62■■■■□ 3.93
IRF3-222ENST00000599144 CC2D2AQ9P2K1 1620 aa39.56■■■■□ 3.92
IRF3-222ENST00000599144 CECR2Q9BXF3 1484 aa39.53■■■■□ 3.92
IRF3-222ENST00000599144 EIF4G1Q04637 1599 aaKnown RBP39.42■■■■□ 3.9
IRF3-222ENST00000599144 DNAJC5Q9H3Z4 198 aa38.1■■■■□ 3.69
IRF3-222ENST00000599144 NCAPD3P42695 1498 aa38.06■■■■□ 3.68
IRF3-222ENST00000599144 ATAD2BQ9ULI0 1458 aa37.98■■■■□ 3.67
IRF3-222ENST00000599144 ERCC6Q03468 1493 aa37.87■■■■□ 3.65
IRF3-222ENST00000599144 SMARCA4P51532 1647 aa37.83■■■■□ 3.65
IRF3-222ENST00000599144 CUX2O14529 1486 aa37.77■■■■□ 3.64
IRF3-222ENST00000599144 SMARCA2P51531 1590 aa37.75■■■■□ 3.63
IRF3-222ENST00000599144 HMGXB3Q12766 1538 aa37.71■■■■□ 3.63
IRF3-222ENST00000599144 NESP48681 1621 aa37.7■■■■□ 3.63
IRF3-222ENST00000599144 BAZ1BQ9UIG0 1483 aaKnown RBP37.58■■■■□ 3.61
IRF3-222ENST00000599144 BAZ1AQ9NRL2 1556 aaPredicted RBP37.58■■■■□ 3.61
IRF3-222ENST00000599144 MROH2BQ7Z745 1585 aa37.43■■■■□ 3.58
IRF3-222ENST00000599144 PEG3Q9GZU2 1588 aa37.38■■■■□ 3.57
IRF3-222ENST00000599144 THOC2Q8NI27 1593 aaKnown RBP37.21■■■■□ 3.55
IRF3-222ENST00000599144 LAMC3Q9Y6N6 1575 aa37.17■■■■□ 3.54
IRF3-222ENST00000599144 KIF21AQ7Z4S6 1674 aa37.04■■■■□ 3.52
IRF3-222ENST00000599144 PDS5BQ9NTI5 1447 aa37.02■■■■□ 3.52
IRF3-222ENST00000599144 CADPSQ9ULU8 1353 aa36.94■■■■□ 3.5
IRF3-222ENST00000599144 WIZO95785 1651 aa36.93■■■■□ 3.5
IRF3-222ENST00000599144 MRC2Q9UBG0 1479 aa36.76■■■■□ 3.48
IRF3-222ENST00000599144 WDR62O43379 1518 aa36.64■■■■□ 3.46
IRF3-222ENST00000599144 RSF1Q96T23 1441 aaPredicted RBP36.57■■■■□ 3.44
IRF3-222ENST00000599144 CEP164Q9UPV0 1460 aa36.56■■■■□ 3.44
IRF3-222ENST00000599144 FANCD2Q9BXW9 1451 aa36.55■■■■□ 3.44
IRF3-222ENST00000599144 TRIM41Q8WV44 630 aa36.51■■■■□ 3.44
IRF3-222ENST00000599144 CFTRP13569 1480 aa36.45■■■■□ 3.43
IRF3-222ENST00000599144 TOP2AP11388 1531 aaKnown RBP36.39■■■■□ 3.42
IRF3-222ENST00000599144 URB2Q14146 1524 aaKnown RBP36.29■■■■□ 3.4
IRF3-222ENST00000599144 OSCARQ8IYS5 282 aa36.1■■■■□ 3.37
IRF3-222ENST00000599144 CCDC88BA6NC98 1476 aa36.07■■■■□ 3.37
IRF3-222ENST00000599144 ZNF608Q9ULD9 1512 aaPredicted RBP35.93■■■■□ 3.34
IRF3-222ENST00000599144 PRDM2Q13029 1718 aa35.85■■■■□ 3.33
IRF3-222ENST00000599144 IFT140Q96RY7 1462 aa35.83■■■■□ 3.33
IRF3-222ENST00000599144 TOPBP1Q92547 1522 aa35.83■■■■□ 3.33
IRF3-222ENST00000599144 RIMBP3CA6NJZ7 1639 aa35.63■■■■□ 3.29
IRF3-222ENST00000599144 RIMBP3BA6NNM3 1639 aa35.63■■■■□ 3.29
IRF3-222ENST00000599144 RIMBP3Q9UFD9 1639 aa35.63■■■■□ 3.29
IRF3-222ENST00000599144 DNMBPQ6XZF7 1577 aa35.61■■■■□ 3.29
IRF3-222ENST00000599144 EIF4G3O43432 1585 aaKnown RBP35.59■■■■□ 3.29
IRF3-222ENST00000599144 ABCC8Q09428 1581 aa35.58■■■■□ 3.29
IRF3-222ENST00000599144 AQRO60306 1485 aaKnown RBP eCLIP35.57■■■■□ 3.282e-7■■■■■ 27
IRF3-222ENST00000599144 ARHGEF11O15085 1522 aa35.52■■■■□ 3.28
IRF3-222ENST00000599144 TARBP1Q13395 1621 aaKnown RBP35.47■■■■□ 3.27
IRF3-222ENST00000599144 POLA1P09884 1462 aaPredicted RBP35.46■■■■□ 3.27
IRF3-222ENST00000599144 FBLN2P98095 1184 aa35.43■■■■□ 3.26
IRF3-222ENST00000599144 RAD54L2Q9Y4B4 1467 aa35.42■■■■□ 3.26
IRF3-222ENST00000599144 CYB5RLQ6IPT4 315 aa35.38■■■■□ 3.25
IRF3-222ENST00000599144 TDRD9Q8NDG6 1382 aaKnown RBP35.35■■■■□ 3.25
IRF3-222ENST00000599144 CHD1O14646 1710 aa35.33■■■■□ 3.25
IRF3-222ENST00000599144 SOGA1O94964 1423 aa35.3■■■■□ 3.24
IRF3-222ENST00000599144 FGD5Q6ZNL6 1462 aa35.22■■■■□ 3.23
IRF3-222ENST00000599144 ARAP1Q96P48 1450 aa35.2■■■■□ 3.23
IRF3-222ENST00000599144 SNAPC4Q5SXM2 1469 aa35.16■■■■□ 3.22
IRF3-222ENST00000599144 CUX1P39880 1505 aa35.16■■■■□ 3.22
IRF3-222ENST00000599144 TRHP20396 242 aaPredicted RBP35.06■■■■□ 3.2
IRF3-222ENST00000599144 CHMP7Q8WUX9 453 aaPredicted RBP35.05■■■■□ 3.2
IRF3-222ENST00000599144 GRIN2BQ13224 1484 aa34.97■■■■□ 3.19
IRF3-222ENST00000599144 SUPT5HO00267 1087 aaKnown RBP34.96■■■■□ 3.19
IRF3-222ENST00000599144 CLASP1Q7Z460 1538 aa34.96■■■■□ 3.19
IRF3-222ENST00000599144 MAGI1Q96QZ7 1491 aaPredicted RBP34.94■■■■□ 3.18
IRF3-222ENST00000599144 WDR97A6NE52 1622 aa34.92■■■■□ 3.18
IRF3-222ENST00000599144 SYNJ2O15056 1496 aa34.87■■■■□ 3.17
IRF3-222ENST00000599144 SYNJ1O43426 1573 aa34.87■■■■□ 3.17
IRF3-222ENST00000599144 GAPVD1Q14C86 1478 aa34.84■■■■□ 3.17
IRF3-222ENST00000599144 PBRM1Q86U86 1689 aa34.74■■■■□ 3.15
IRF3-222ENST00000599144 ABCA10Q8WWZ4 1543 aa34.74■■■■□ 3.15
IRF3-222ENST00000599144 ABCA5Q8WWZ7 1642 aa34.69■■■■□ 3.14
IRF3-222ENST00000599144 WRNQ14191 1432 aaPredicted RBP eCLIP34.57■■■■□ 3.13
IRF3-222ENST00000599144 ERCC6L2Q5T890 1561 aa34.53■■■■□ 3.12
IRF3-222ENST00000599144 GRIN2AQ12879 1464 aa34.53■■■■□ 3.12
IRF3-222ENST00000599144 ADAMTS12P58397 1594 aa34.47■■■■□ 3.11
IRF3-222ENST00000599144 CEP170Q5SW79 1584 aa34.45■■■■□ 3.1
IRF3-222ENST00000599144 TOP2BQ02880 1626 aa34.44■■■■□ 3.1
IRF3-222ENST00000599144 NUP160Q12769 1436 aa34.42■■■■□ 3.1
IRF3-222ENST00000599144 BIVM-ERCC5R4GMW8 1640 aa34.41■■■■□ 3.1
IRF3-222ENST00000599144 FHAD1B1AJZ9 1412 aa34.38■■■■□ 3.09
IRF3-222ENST00000599144 ERICH3Q5RHP9 1530 aa34.25■■■■□ 3.07
IRF3-222ENST00000599144 SHROOM2Q13796 1616 aa34.21■■■■□ 3.07
IRF3-222ENST00000599144 PRG4Q92954 1404 aaPredicted RBP34.17■■■■□ 3.06
IRF3-222ENST00000599144 AEBP2Q6ZN18 517 aaPredicted RBP34.13■■■■□ 3.05
IRF3-222ENST00000599144 JPH4Q96JJ6 628 aa34.12■■■■□ 3.05
IRF3-222ENST00000599144 RUSC2Q8N2Y8 1516 aa33.99■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms