RNA–Protein interactions for RNA: ENST00000272102.9

ARF1-201, Transcript of ADP ribosylation factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARF1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-201ENST00000272102 NISCHQ9Y2I1 1504 aa25.77■■□□□ 1.72
ARF1-201ENST00000272102 CCDC180Q9P1Z9 1646 aa22.73■■□□□ 1.23
ARF1-201ENST00000272102 ABCC9O60706 1549 aa22.21■■□□□ 1.15
ARF1-201ENST00000272102 DCAF8L2P0C7V8 631 aa21.58■■□□□ 1.04
ARF1-201ENST00000272102 ZCCHC6Q5VYS8 1495 aaKnown RBP21.51■■□□□ 1.03
ARF1-201ENST00000272102 NACADO15069 1562 aa21.33■■□□□ 1
ARF1-201ENST00000272102 RB1CC1Q8TDY2 1594 aa21.31■■□□□ 1
ARF1-201ENST00000272102 DCAF1Q9Y4B6 1507 aa21.23■□□□□ 0.99
ARF1-201ENST00000272102 MYO15BQ96JP2 1530 aa21.21■□□□□ 0.99
ARF1-201ENST00000272102 UNC13AQ9UPW8 1703 aa20.92■□□□□ 0.94
ARF1-201ENST00000272102 SCRIBQ14160 1630 aa20.91■□□□□ 0.94
ARF1-201ENST00000272102 PABPN1Q86U42 306 aaKnown RBP eCLIP20.83■□□□□ 0.92
ARF1-201ENST00000272102 BICRAQ9NZM4 1560 aa20.75■□□□□ 0.91
ARF1-201ENST00000272102 SHROOM4Q9ULL8 1493 aa20.68■□□□□ 0.9
ARF1-201ENST00000272102 DNAJC5BQ9UF47 199 aa20.52■□□□□ 0.87
ARF1-201ENST00000272102 EIF4G1Q04637 1599 aaKnown RBP20.16■□□□□ 0.82
ARF1-201ENST00000272102 CECR2Q9BXF3 1484 aa20.15■□□□□ 0.82
ARF1-201ENST00000272102 CC2D2AQ9P2K1 1620 aa20.05■□□□□ 0.8
ARF1-201ENST00000272102 SMARCA4P51532 1647 aa19.96■□□□□ 0.79
ARF1-201ENST00000272102 MROH2BQ7Z745 1585 aa19.93■□□□□ 0.78
ARF1-201ENST00000272102 BAZ1AQ9NRL2 1556 aaPredicted RBP19.93■□□□□ 0.78
ARF1-201ENST00000272102 ATAD2BQ9ULI0 1458 aa19.8■□□□□ 0.76
ARF1-201ENST00000272102 RSF1Q96T23 1441 aaPredicted RBP19.76■□□□□ 0.75
ARF1-201ENST00000272102 WIZO95785 1651 aa19.73■□□□□ 0.75
ARF1-201ENST00000272102 SMARCA2P51531 1590 aa19.72■□□□□ 0.75
ARF1-201ENST00000272102 NCAPD3P42695 1498 aa19.7■□□□□ 0.74
ARF1-201ENST00000272102 PEG3Q9GZU2 1588 aa19.7■□□□□ 0.74
ARF1-201ENST00000272102 BAZ1BQ9UIG0 1483 aaKnown RBP19.64■□□□□ 0.74
ARF1-201ENST00000272102 HMGXB3Q12766 1538 aa19.62■□□□□ 0.73
ARF1-201ENST00000272102 SUPT5HO00267 1087 aaKnown RBP19.52■□□□□ 0.72
ARF1-201ENST00000272102 TOP2AP11388 1531 aaKnown RBP19.46■□□□□ 0.71
ARF1-201ENST00000272102 NESP48681 1621 aa19.31■□□□□ 0.68
ARF1-201ENST00000272102 CCDC88BA6NC98 1476 aa19.28■□□□□ 0.68
ARF1-201ENST00000272102 CADPSQ9ULU8 1353 aa19.17■□□□□ 0.66
ARF1-201ENST00000272102 LAMC3Q9Y6N6 1575 aa19.13■□□□□ 0.65
ARF1-201ENST00000272102 CFTRP13569 1480 aa19.1■□□□□ 0.65
ARF1-201ENST00000272102 ERCC6Q03468 1493 aa19.06■□□□□ 0.64
ARF1-201ENST00000272102 KIF21AQ7Z4S6 1674 aa19.03■□□□□ 0.64
ARF1-201ENST00000272102 PDS5BQ9NTI5 1447 aa19■□□□□ 0.63
ARF1-201ENST00000272102 FANCD2Q9BXW9 1451 aa18.98■□□□□ 0.63
ARF1-201ENST00000272102 PRDM2Q13029 1718 aa18.93■□□□□ 0.62
ARF1-201ENST00000272102 CEP164Q9UPV0 1460 aa18.91■□□□□ 0.62
ARF1-201ENST00000272102 THOC2Q8NI27 1593 aaKnown RBP18.88■□□□□ 0.61
ARF1-201ENST00000272102 MRC2Q9UBG0 1479 aa18.83■□□□□ 0.61
ARF1-201ENST00000272102 URB2Q14146 1524 aaKnown RBP18.8■□□□□ 0.6
ARF1-201ENST00000272102 WDR62O43379 1518 aa18.76■□□□□ 0.59
ARF1-201ENST00000272102 DNAJC5Q9H3Z4 198 aa18.73■□□□□ 0.59
ARF1-201ENST00000272102 ABCC8Q09428 1581 aa18.71■□□□□ 0.59
ARF1-201ENST00000272102 TOPBP1Q92547 1522 aa18.7■□□□□ 0.58
ARF1-201ENST00000272102 CUX2O14529 1486 aa18.7■□□□□ 0.58
ARF1-201ENST00000272102 CUX1P39880 1505 aa18.67■□□□□ 0.58
ARF1-201ENST00000272102 DNMBPQ6XZF7 1577 aa18.66■□□□□ 0.58
ARF1-201ENST00000272102 WRNQ14191 1432 aaPredicted RBP eCLIP18.6■□□□□ 0.576e-7■■■■■ 33.4
ARF1-201ENST00000272102 SYNJ1O43426 1573 aa18.6■□□□□ 0.57
ARF1-201ENST00000272102 POLA1P09884 1462 aaPredicted RBP18.57■□□□□ 0.56
ARF1-201ENST00000272102 FGD5Q6ZNL6 1462 aa18.56■□□□□ 0.56
ARF1-201ENST00000272102 RAD54L2Q9Y4B4 1467 aa18.54■□□□□ 0.56
ARF1-201ENST00000272102 TOP2BQ02880 1626 aa18.51■□□□□ 0.55
ARF1-201ENST00000272102 BIVM-ERCC5R4GMW8 1640 aa18.5■□□□□ 0.55
ARF1-201ENST00000272102 ZNF608Q9ULD9 1512 aaPredicted RBP18.49■□□□□ 0.55
ARF1-201ENST00000272102 SOGA1O94964 1423 aa18.48■□□□□ 0.55
ARF1-201ENST00000272102 TARBP1Q13395 1621 aaKnown RBP18.47■□□□□ 0.55
ARF1-201ENST00000272102 IFT140Q96RY7 1462 aa18.47■□□□□ 0.55
ARF1-201ENST00000272102 TDRD9Q8NDG6 1382 aaKnown RBP18.41■□□□□ 0.54
ARF1-201ENST00000272102 AQRO60306 1485 aaKnown RBP eCLIP18.41■□□□□ 0.545e-7■■■■□ 21.3
ARF1-201ENST00000272102 EIF4G3O43432 1585 aaKnown RBP18.37■□□□□ 0.53
ARF1-201ENST00000272102 WDR97A6NE52 1622 aa18.36■□□□□ 0.53
ARF1-201ENST00000272102 ABCA10Q8WWZ4 1543 aa18.34■□□□□ 0.53
ARF1-201ENST00000272102 TRIM41Q8WV44 630 aa18.34■□□□□ 0.53
ARF1-201ENST00000272102 CHIC1Q5VXU3 224 aa18.29■□□□□ 0.52
ARF1-201ENST00000272102 ABCA5Q8WWZ7 1642 aa18.27■□□□□ 0.52
ARF1-201ENST00000272102 GAPVD1Q14C86 1478 aa18.26■□□□□ 0.51
ARF1-201ENST00000272102 SNAPC4Q5SXM2 1469 aa18.21■□□□□ 0.51
ARF1-201ENST00000272102 PBRM1Q86U86 1689 aa18.21■□□□□ 0.51
ARF1-201ENST00000272102 RUSC2Q8N2Y8 1516 aa18.2■□□□□ 0.5
ARF1-201ENST00000272102 GRIN2BQ13224 1484 aa18.2■□□□□ 0.5
ARF1-201ENST00000272102 KIF27Q86VH2 1401 aa18.16■□□□□ 0.5
ARF1-201ENST00000272102 FBLN2P98095 1184 aa18.16■□□□□ 0.5
ARF1-201ENST00000272102 PELP1Q8IZL8 1130 aaKnown RBP18.14■□□□□ 0.49
ARF1-201ENST00000272102 MAGI1Q96QZ7 1491 aaPredicted RBP18.12■□□□□ 0.49
ARF1-201ENST00000272102 CHD1O14646 1710 aa18.1■□□□□ 0.49
ARF1-201ENST00000272102 IGF1RP08069 1367 aa18.1■□□□□ 0.49
ARF1-201ENST00000272102 ERICH3Q5RHP9 1530 aa18.1■□□□□ 0.49
ARF1-201ENST00000272102 ADAMTS12P58397 1594 aa18.08■□□□□ 0.49
ARF1-201ENST00000272102 FAM9AQ8IZU1 332 aaPredicted RBP18.07■□□□□ 0.48
ARF1-201ENST00000272102 CHMP7Q8WUX9 453 aaPredicted RBP18.07■□□□□ 0.48
ARF1-201ENST00000272102 SYNJ2O15056 1496 aa18.06■□□□□ 0.48
ARF1-201ENST00000272102 FHAD1B1AJZ9 1412 aa18.03■□□□□ 0.48
ARF1-201ENST00000272102 OSCARQ8IYS5 282 aa18.02■□□□□ 0.48
ARF1-201ENST00000272102 GRIN2AQ12879 1464 aa18■□□□□ 0.47
ARF1-201ENST00000272102 CARMIL1Q5VZK9 1371 aa17.99■□□□□ 0.47
ARF1-201ENST00000272102 CUL7Q14999 1698 aa17.97■□□□□ 0.47
ARF1-201ENST00000272102 CEP170Q5SW79 1584 aa17.93■□□□□ 0.46
ARF1-201ENST00000272102 CSRNP3Q8WYN3 585 aa17.93■□□□□ 0.46
ARF1-201ENST00000272102 EHMT2Q96KQ7 1210 aa17.91■□□□□ 0.46
ARF1-201ENST00000272102 NUP160Q12769 1436 aa17.89■□□□□ 0.46
ARF1-201ENST00000272102 EEA1Q15075 1411 aa17.89■□□□□ 0.46
ARF1-201ENST00000272102 PRXQ9BXM0 1461 aa17.89■□□□□ 0.45
ARF1-201ENST00000272102 RAPGEF2Q9Y4G8 1499 aa17.89■□□□□ 0.45
ARF1-201ENST00000272102 CLASP1Q7Z460 1538 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms