RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 NISCHQ9Y2I1 1504 aa52.59■■■■■ 6.01
HMGA2-205ENST00000425208 CCDC180Q9P1Z9 1646 aa46.65■■■■■ 5.06
HMGA2-205ENST00000425208 ABCC9O60706 1549 aa45.22■■■■■ 4.83
HMGA2-205ENST00000425208 ZCCHC6Q5VYS8 1495 aaKnown RBP43.91■■■■■ 4.62
HMGA2-205ENST00000425208 DCAF8L2P0C7V8 631 aa43.75■■■■■ 4.59
HMGA2-205ENST00000425208 NACADO15069 1562 aa43.74■■■■■ 4.59
HMGA2-205ENST00000425208 RB1CC1Q8TDY2 1594 aa43.7■■■■■ 4.59
HMGA2-205ENST00000425208 MYO15BQ96JP2 1530 aa43.59■■■■■ 4.57
HMGA2-205ENST00000425208 DCAF1Q9Y4B6 1507 aa43.55■■■■■ 4.56
HMGA2-205ENST00000425208 UNC13AQ9UPW8 1703 aa42.74■■■■■ 4.43
HMGA2-205ENST00000425208 SCRIBQ14160 1630 aa42.58■■■■■ 4.41
HMGA2-205ENST00000425208 BICRAQ9NZM4 1560 aa42.33■■■■■ 4.37
HMGA2-205ENST00000425208 PABPN1Q86U42 306 aaKnown RBP eCLIP42.28■■■■■ 4.36
HMGA2-205ENST00000425208 SHROOM4Q9ULL8 1493 aa41.97■■■■■ 4.31
HMGA2-205ENST00000425208 EIF4G1Q04637 1599 aaKnown RBP41.21■■■■■ 4.19
HMGA2-205ENST00000425208 DNAJC5BQ9UF47 199 aa41.07■■■■■ 4.16
HMGA2-205ENST00000425208 CC2D2AQ9P2K1 1620 aa40.95■■■■■ 4.15
HMGA2-205ENST00000425208 CECR2Q9BXF3 1484 aa40.9■■■■■ 4.14
HMGA2-205ENST00000425208 BAZ1AQ9NRL2 1556 aaPredicted RBP40.77■■■■■ 4.12
HMGA2-205ENST00000425208 SMARCA4P51532 1647 aa40.76■■■■■ 4.12
HMGA2-205ENST00000425208 MROH2BQ7Z745 1585 aa40.53■■■■■ 4.08
HMGA2-205ENST00000425208 SMARCA2P51531 1590 aa40.42■■■■■ 4.06
HMGA2-205ENST00000425208 ATAD2BQ9ULI0 1458 aa40.4■■■■■ 4.06
HMGA2-205ENST00000425208 PEG3Q9GZU2 1588 aa40.35■■■■■ 4.05
HMGA2-205ENST00000425208 NCAPD3P42695 1498 aa40.31■■■■■ 4.04
HMGA2-205ENST00000425208 HMGXB3Q12766 1538 aa40.2■■■■■ 4.03
HMGA2-205ENST00000425208 RSF1Q96T23 1441 aaPredicted RBP40.19■■■■■ 4.02
HMGA2-205ENST00000425208 WIZO95785 1651 aa40.14■■■■■ 4.02
HMGA2-205ENST00000425208 BAZ1BQ9UIG0 1483 aaKnown RBP40.12■■■■■ 4.01
HMGA2-205ENST00000425208 TOP2AP11388 1531 aaKnown RBP39.74■■■■□ 3.95
HMGA2-205ENST00000425208 SUPT5HO00267 1087 aaKnown RBP39.46■■■■□ 3.91
HMGA2-205ENST00000425208 LAMC3Q9Y6N6 1575 aa39.24■■■■□ 3.87
HMGA2-205ENST00000425208 NESP48681 1621 aa39.24■■■■□ 3.87
HMGA2-205ENST00000425208 CCDC88BA6NC98 1476 aa39.24■■■■□ 3.87
HMGA2-205ENST00000425208 CADPSQ9ULU8 1353 aa39.16■■■■□ 3.86
HMGA2-205ENST00000425208 CFTRP13569 1480 aa39.03■■■■□ 3.84
HMGA2-205ENST00000425208 ERCC6Q03468 1493 aa38.99■■■■□ 3.83
HMGA2-205ENST00000425208 PDS5BQ9NTI5 1447 aa38.95■■■■□ 3.83
HMGA2-205ENST00000425208 PRDM2Q13029 1718 aa38.85■■■■□ 3.81
HMGA2-205ENST00000425208 KIF21AQ7Z4S6 1674 aa38.85■■■■□ 3.81
HMGA2-205ENST00000425208 FANCD2Q9BXW9 1451 aa38.74■■■■□ 3.79
HMGA2-205ENST00000425208 CEP164Q9UPV0 1460 aa38.68■■■■□ 3.78
HMGA2-205ENST00000425208 THOC2Q8NI27 1593 aaKnown RBP38.61■■■■□ 3.77
HMGA2-205ENST00000425208 MRC2Q9UBG0 1479 aa38.53■■■■□ 3.76
HMGA2-205ENST00000425208 CUX2O14529 1486 aa38.42■■■■□ 3.74
HMGA2-205ENST00000425208 WDR62O43379 1518 aa38.4■■■■□ 3.74
HMGA2-205ENST00000425208 URB2Q14146 1524 aaKnown RBP38.32■■■■□ 3.72
HMGA2-205ENST00000425208 ABCC8Q09428 1581 aa38.19■■■■□ 3.7
HMGA2-205ENST00000425208 DNMBPQ6XZF7 1577 aa38.17■■■■□ 3.7
HMGA2-205ENST00000425208 TOPBP1Q92547 1522 aa38.16■■■■□ 3.7
HMGA2-205ENST00000425208 CUX1P39880 1505 aa38.01■■■■□ 3.68
HMGA2-205ENST00000425208 WRNQ14191 1432 aaPredicted RBP eCLIP37.91■■■■□ 3.66
HMGA2-205ENST00000425208 POLA1P09884 1462 aaPredicted RBP37.87■■■■□ 3.65
HMGA2-205ENST00000425208 IFT140Q96RY7 1462 aa37.84■■■■□ 3.65
HMGA2-205ENST00000425208 FGD5Q6ZNL6 1462 aa37.83■■■■□ 3.65
HMGA2-205ENST00000425208 TOP2BQ02880 1626 aa37.81■■■■□ 3.64
HMGA2-205ENST00000425208 BIVM-ERCC5R4GMW8 1640 aa37.81■■■■□ 3.64
HMGA2-205ENST00000425208 SYNJ1O43426 1573 aa37.81■■■■□ 3.64
HMGA2-205ENST00000425208 TARBP1Q13395 1621 aaKnown RBP37.72■■■■□ 3.63
HMGA2-205ENST00000425208 SOGA1O94964 1423 aa37.69■■■■□ 3.62
HMGA2-205ENST00000425208 RAD54L2Q9Y4B4 1467 aa37.67■■■■□ 3.62
HMGA2-205ENST00000425208 ZNF608Q9ULD9 1512 aaPredicted RBP37.6■■■■□ 3.61
HMGA2-205ENST00000425208 WDR97A6NE52 1622 aa37.54■■■■□ 3.6
HMGA2-205ENST00000425208 EIF4G3O43432 1585 aaKnown RBP37.53■■■■□ 3.6
HMGA2-205ENST00000425208 ABCA10Q8WWZ4 1543 aa37.48■■■■□ 3.59
HMGA2-205ENST00000425208 TDRD9Q8NDG6 1382 aaKnown RBP37.43■■■■□ 3.58
HMGA2-205ENST00000425208 AQRO60306 1485 aaKnown RBP eCLIP37.43■■■■□ 3.583e-8■■□□□ 13.1
HMGA2-205ENST00000425208 ABCA5Q8WWZ7 1642 aa37.33■■■■□ 3.57
HMGA2-205ENST00000425208 GAPVD1Q14C86 1478 aa37.29■■■■□ 3.56
HMGA2-205ENST00000425208 TRIM41Q8WV44 630 aa37.26■■■■□ 3.55
HMGA2-205ENST00000425208 PBRM1Q86U86 1689 aa37.24■■■■□ 3.55
HMGA2-205ENST00000425208 GRIN2BQ13224 1484 aa37.23■■■■□ 3.55
HMGA2-205ENST00000425208 SNAPC4Q5SXM2 1469 aa37.13■■■■□ 3.53
HMGA2-205ENST00000425208 MAGI1Q96QZ7 1491 aaPredicted RBP37.11■■■■□ 3.53
HMGA2-205ENST00000425208 KIF27Q86VH2 1401 aa37.1■■■■□ 3.53
HMGA2-205ENST00000425208 ERICH3Q5RHP9 1530 aa37.06■■■■□ 3.52
HMGA2-205ENST00000425208 CHIC1Q5VXU3 224 aa37.02■■■■□ 3.52
HMGA2-205ENST00000425208 CHD1O14646 1710 aa36.99■■■■□ 3.51
HMGA2-205ENST00000425208 SYNJ2O15056 1496 aa36.95■■■■□ 3.51
HMGA2-205ENST00000425208 ADAMTS12P58397 1594 aa36.94■■■■□ 3.5
HMGA2-205ENST00000425208 FBLN2P98095 1184 aa36.93■■■■□ 3.5
HMGA2-205ENST00000425208 CHMP7Q8WUX9 453 aaPredicted RBP36.88■■■■□ 3.49
HMGA2-205ENST00000425208 FHAD1B1AJZ9 1412 aa36.87■■■■□ 3.49
HMGA2-205ENST00000425208 OSCARQ8IYS5 282 aa36.86■■■■□ 3.49
HMGA2-205ENST00000425208 IGF1RP08069 1367 aa36.85■■■■□ 3.49
HMGA2-205ENST00000425208 CUL7Q14999 1698 aa36.83■■■■□ 3.49
HMGA2-205ENST00000425208 RUSC2Q8N2Y8 1516 aa36.83■■■■□ 3.49
HMGA2-205ENST00000425208 DNAJC5Q9H3Z4 198 aa36.81■■■■□ 3.48
HMGA2-205ENST00000425208 GRIN2AQ12879 1464 aa36.76■■■■□ 3.48
HMGA2-205ENST00000425208 CARMIL1Q5VZK9 1371 aa36.66■■■■□ 3.46
HMGA2-205ENST00000425208 EEA1Q15075 1411 aa36.65■■■■□ 3.46
HMGA2-205ENST00000425208 NUP160Q12769 1436 aa36.57■■■■□ 3.44
HMGA2-205ENST00000425208 CLASP1Q7Z460 1538 aa36.57■■■■□ 3.44
HMGA2-205ENST00000425208 CEP170Q5SW79 1584 aa36.56■■■■□ 3.44
HMGA2-205ENST00000425208 RAPGEF2Q9Y4G8 1499 aa36.51■■■■□ 3.44
HMGA2-205ENST00000425208 CSRNP3Q8WYN3 585 aa36.5■■■■□ 3.43
HMGA2-205ENST00000425208 FAM9AQ8IZU1 332 aaPredicted RBP36.46■■■■□ 3.43
HMGA2-205ENST00000425208 PRXQ9BXM0 1461 aa36.46■■■■□ 3.43
HMGA2-205ENST00000425208 KIAA0586Q9BVV6 1533 aa36.31■■■■□ 3.4
HMGA2-205ENST00000425208 ARHGEF11O15085 1522 aa36.3■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms