RNA–Protein interactions for RNA: ENST00000279227.9

FERMT3-201, Transcript of fermitin family member 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene FERMT3, Length 2,489 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT3-201ENST00000279227 NISCHQ9Y2I1 1504 aa28.27■■■□□ 2.12
FERMT3-201ENST00000279227 HRCP23327 699 aa25.56■■□□□ 1.68
FERMT3-201ENST00000279227 PELP1Q8IZL8 1130 aaKnown RBP25.38■■□□□ 1.65
FERMT3-201ENST00000279227 PPARGC1BQ86YN6 1023 aaKnown RBP24.72■■□□□ 1.55
FERMT3-201ENST00000279227 PCGF6Q9BYE7 350 aa24.7■■□□□ 1.54
FERMT3-201ENST00000279227 MYT1Q01538 1121 aa24.6■■□□□ 1.53
FERMT3-201ENST00000279227 MYO15BQ96JP2 1530 aa24.48■■□□□ 1.51
FERMT3-201ENST00000279227 SUPT5HO00267 1087 aaKnown RBP24.4■■□□□ 1.5
FERMT3-201ENST00000279227 DCAF1Q9Y4B6 1507 aa24.34■■□□□ 1.49
FERMT3-201ENST00000279227 SHROOM4Q9ULL8 1493 aa24.32■■□□□ 1.48
FERMT3-201ENST00000279227 CHIC1Q5VXU3 224 aa24.3■■□□□ 1.48
FERMT3-201ENST00000279227 CCDC180Q9P1Z9 1646 aa24.26■■□□□ 1.47
FERMT3-201ENST00000279227 SCAF1Q9H7N4 1312 aaKnown RBP24.23■■□□□ 1.47
FERMT3-201ENST00000279227 ZEB1P37275 1124 aaPredicted RBP24.09■■□□□ 1.45
FERMT3-201ENST00000279227 TRIM26Q12899 539 aaPredicted RBP24.03■■□□□ 1.44
FERMT3-201ENST00000279227 ZCCHC6Q5VYS8 1495 aaKnown RBP23.91■■□□□ 1.42
FERMT3-201ENST00000279227 ACIN1Q9UKV3 1341 aaKnown RBP23.66■■□□□ 1.38
FERMT3-201ENST00000279227 LOC105371045A0A1W2PR82 267 aa23.58■■□□□ 1.37
FERMT3-201ENST00000279227 NEUROD1Q13562 356 aa23.45■■□□□ 1.34
FERMT3-201ENST00000279227 CENPBP07199 599 aaPredicted RBP23.4■■□□□ 1.34
FERMT3-201ENST00000279227 GTF3C3Q9Y5Q9 886 aa23.38■■□□□ 1.33
FERMT3-201ENST00000279227 TTBK1Q5TCY1 1321 aaPredicted RBP23.21■■□□□ 1.31
FERMT3-201ENST00000279227 DCAF8L2P0C7V8 631 aa23.16■■□□□ 1.3
FERMT3-201ENST00000279227 DIEXFQ68CQ4 756 aaKnown RBP23.04■■□□□ 1.28
FERMT3-201ENST00000279227 CCER1Q8TC90 406 aaPredicted RBP22.84■■□□□ 1.25
FERMT3-201ENST00000279227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.75■■□□□ 1.23
FERMT3-201ENST00000279227 TRIM41Q8WV44 630 aa22.74■■□□□ 1.23
FERMT3-201ENST00000279227 BCL11AQ9H165 835 aa22.6■■□□□ 1.21
FERMT3-201ENST00000279227 ZNF316A6NFI3 1004 aaPredicted RBP22.58■■□□□ 1.21
FERMT3-201ENST00000279227 ABCC9O60706 1549 aa22.58■■□□□ 1.2
FERMT3-201ENST00000279227 CLSPNQ9HAW4 1339 aa22.54■■□□□ 1.2
FERMT3-201ENST00000279227 SCRIBQ14160 1630 aa22.54■■□□□ 1.2
FERMT3-201ENST00000279227 YTHDC1Q96MU7 727 aaKnown RBP22.51■■□□□ 1.19
FERMT3-201ENST00000279227 ANP32EQ9BTT0 268 aa22.51■■□□□ 1.19
FERMT3-201ENST00000279227 FAM9AQ8IZU1 332 aaPredicted RBP22.49■■□□□ 1.19
FERMT3-201ENST00000279227 NACADO15069 1562 aa22.37■■□□□ 1.17
FERMT3-201ENST00000279227 MIER1Q8N108 512 aa22.34■■□□□ 1.17
FERMT3-201ENST00000279227 RSF1Q96T23 1441 aaPredicted RBP22.29■■□□□ 1.16
FERMT3-201ENST00000279227 RB1CC1Q8TDY2 1594 aa22.26■■□□□ 1.15
FERMT3-201ENST00000279227 SUPT16HQ9Y5B9 1047 aaKnown RBP22.24■■□□□ 1.15
FERMT3-201ENST00000279227 EHMT2Q96KQ7 1210 aa22.23■■□□□ 1.15
FERMT3-201ENST00000279227 WRNQ14191 1432 aaPredicted RBP eCLIP22.23■■□□□ 1.15
FERMT3-201ENST00000279227 TSHZ2Q9NRE2 1034 aa22.22■■□□□ 1.15
FERMT3-201ENST00000279227 CSRNP3Q8WYN3 585 aa22.13■■□□□ 1.13
FERMT3-201ENST00000279227 CECR2Q9BXF3 1484 aa21.98■■□□□ 1.11
FERMT3-201ENST00000279227 MROH2BQ7Z745 1585 aa21.93■■□□□ 1.1
FERMT3-201ENST00000279227 CEP162Q5TB80 1403 aa21.89■■□□□ 1.1
FERMT3-201ENST00000279227 PRKCSHP14314 528 aaPredicted RBP21.86■■□□□ 1.09
FERMT3-201ENST00000279227 WIZO95785 1651 aa21.85■■□□□ 1.09
FERMT3-201ENST00000279227 TNIKQ9UKE5 1360 aa21.8■■□□□ 1.08
FERMT3-201ENST00000279227 UNC13AQ9UPW8 1703 aa21.78■■□□□ 1.08
FERMT3-201ENST00000279227 BAZ1AQ9NRL2 1556 aaPredicted RBP21.76■■□□□ 1.07
FERMT3-201ENST00000279227 ERICH6Q7L0X2 663 aa21.69■■□□□ 1.06
FERMT3-201ENST00000279227 EIF4G1Q04637 1599 aaKnown RBP21.68■■□□□ 1.06
FERMT3-201ENST00000279227 RBM19Q9Y4C8 960 aaKnown RBP21.67■■□□□ 1.06
FERMT3-201ENST00000279227 HNRNPUL2Q1KMD3 747 aaKnown RBP21.62■■□□□ 1.05
FERMT3-201ENST00000279227 SMARCA4P51532 1647 aa21.6■■□□□ 1.05
FERMT3-201ENST00000279227 EEA1Q15075 1411 aa21.59■■□□□ 1.05
FERMT3-201ENST00000279227 MYT1LQ9UL68 1186 aa21.57■■□□□ 1.04
FERMT3-201ENST00000279227 TOP2AP11388 1531 aaKnown RBP21.54■■□□□ 1.04
FERMT3-201ENST00000279227 FKBP8Q14318 412 aa21.53■■□□□ 1.04
FERMT3-201ENST00000279227 BCANQ96GW7 911 aa21.53■■□□□ 1.04
FERMT3-201ENST00000279227 CCDC88BA6NC98 1476 aa21.48■■□□□ 1.03
FERMT3-201ENST00000279227 NEFLP07196 543 aa21.47■■□□□ 1.03
FERMT3-201ENST00000279227 GOLGA3Q08378 1498 aa21.47■■□□□ 1.03
FERMT3-201ENST00000279227 FANCIQ9NVI1 1328 aa21.46■■□□□ 1.03
FERMT3-201ENST00000279227 MSH5O43196 834 aa21.44■■□□□ 1.02
FERMT3-201ENST00000279227 ABCC8Q09428 1581 aa21.44■■□□□ 1.02
FERMT3-201ENST00000279227 UBTFP17480 764 aaKnown RBP21.44■■□□□ 1.02
FERMT3-201ENST00000279227 BICRAQ9NZM4 1560 aa21.42■■□□□ 1.02
FERMT3-201ENST00000279227 DHX57Q6P158 1386 aaKnown RBP21.42■■□□□ 1.02
FERMT3-201ENST00000279227 SMARCA2P51531 1590 aa21.41■■□□□ 1.02
FERMT3-201ENST00000279227 SOGA1O94964 1423 aa21.41■■□□□ 1.02
FERMT3-201ENST00000279227 VPS8Q8N3P4 1428 aa21.32■■□□□ 1
FERMT3-201ENST00000279227 APLP2Q06481 763 aa21.3■■□□□ 1
FERMT3-201ENST00000279227 KCNH8Q96L42 1107 aa21.29■■□□□ 1
FERMT3-201ENST00000279227 CLIP1P30622 1438 aa21.25■□□□□ 0.99
FERMT3-201ENST00000279227 PEG3Q9GZU2 1588 aa21.24■□□□□ 0.99
FERMT3-201ENST00000279227 DEKP35659 375 aaKnown RBP21.23■□□□□ 0.99
FERMT3-201ENST00000279227 CEP164Q9UPV0 1460 aa21.23■□□□□ 0.99
FERMT3-201ENST00000279227 PABPN1Q86U42 306 aaKnown RBP eCLIP21.22■□□□□ 0.99
FERMT3-201ENST00000279227 ITGAEP38570 1179 aa21.21■□□□□ 0.99
FERMT3-201ENST00000279227 RUSC2Q8N2Y8 1516 aa21.21■□□□□ 0.99
FERMT3-201ENST00000279227 KIF21BO75037 1637 aa21.2■□□□□ 0.98
FERMT3-201ENST00000279227 CDK11AQ9UQ88 783 aaPredicted RBP21.19■□□□□ 0.98
FERMT3-201ENST00000279227 ERICH6BQ5W0A0 696 aa21.17■□□□□ 0.98
FERMT3-201ENST00000279227 CCER2I3L3R5 266 aa21.14■□□□□ 0.97
FERMT3-201ENST00000279227 CUX2O14529 1486 aa21.12■□□□□ 0.97
FERMT3-201ENST00000279227 BAZ1BQ9UIG0 1483 aaKnown RBP21.12■□□□□ 0.97
FERMT3-201ENST00000279227 ANO8Q9HCE9 1232 aaPredicted RBP21.06■□□□□ 0.96
FERMT3-201ENST00000279227 DDX10Q13206 875 aaKnown RBP21.01■□□□□ 0.95
FERMT3-201ENST00000279227 ATAD2BQ9ULI0 1458 aa21■□□□□ 0.95
FERMT3-201ENST00000279227 RRBP1Q9P2E9 1410 aaKnown RBP21■□□□□ 0.95
FERMT3-201ENST00000279227 TRIM52Q96A61 297 aa21■□□□□ 0.95
FERMT3-201ENST00000279227 PPP1R15AO75807 674 aaPredicted RBP20.99■□□□□ 0.95
FERMT3-201ENST00000279227 ANP32CO43423 234 aa20.96■□□□□ 0.95
FERMT3-201ENST00000279227 NOP58Q9Y2X3 529 aaKnown RBP20.92■□□□□ 0.94
FERMT3-201ENST00000279227 MAPKBP1O60336 1514 aa20.9■□□□□ 0.94
FERMT3-201ENST00000279227 SYNJ1O43426 1573 aa20.88■□□□□ 0.93
FERMT3-201ENST00000279227 PPP4R2Q9NY27 417 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms