RNA–Protein interactions for RNA: ENST00000593337.5

IRF3-205, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-205ENST00000593337 NISCHQ9Y2I1 1504 aa44.47■■■■■ 4.71
IRF3-205ENST00000593337 CCDC180Q9P1Z9 1646 aa39.54■■■■□ 3.92
IRF3-205ENST00000593337 ABCC9O60706 1549 aa38.28■■■■□ 3.72
IRF3-205ENST00000593337 ZCCHC6Q5VYS8 1495 aaKnown RBP37.13■■■■□ 3.54
IRF3-205ENST00000593337 NACADO15069 1562 aa37.02■■■■□ 3.52
IRF3-205ENST00000593337 RB1CC1Q8TDY2 1594 aa37■■■■□ 3.51
IRF3-205ENST00000593337 MYO15BQ96JP2 1530 aa36.91■■■■□ 3.5
IRF3-205ENST00000593337 DCAF1Q9Y4B6 1507 aa36.85■■■■□ 3.49
IRF3-205ENST00000593337 DCAF8L2P0C7V8 631 aa36.8■■■■□ 3.48
IRF3-205ENST00000593337 UNC13AQ9UPW8 1703 aa36.34■■■■□ 3.41
IRF3-205ENST00000593337 SCRIBQ14160 1630 aa36.01■■■■□ 3.36
IRF3-205ENST00000593337 BICRAQ9NZM4 1560 aa35.93■■■■□ 3.34
IRF3-205ENST00000593337 PABPN1Q86U42 306 aaKnown RBP eCLIP35.73■■■■□ 3.31
IRF3-205ENST00000593337 SHROOM4Q9ULL8 1493 aa35.55■■■■□ 3.28
IRF3-205ENST00000593337 EIF4G1Q04637 1599 aaKnown RBP34.92■■■■□ 3.18
IRF3-205ENST00000593337 DNAJC5BQ9UF47 199 aa34.87■■■■□ 3.17
IRF3-205ENST00000593337 CC2D2AQ9P2K1 1620 aa34.72■■■■□ 3.15
IRF3-205ENST00000593337 CECR2Q9BXF3 1484 aa34.59■■■■□ 3.13
IRF3-205ENST00000593337 SMARCA4P51532 1647 aa34.51■■■■□ 3.11
IRF3-205ENST00000593337 BAZ1AQ9NRL2 1556 aaPredicted RBP34.45■■■■□ 3.11
IRF3-205ENST00000593337 MROH2BQ7Z745 1585 aa34.28■■■■□ 3.08
IRF3-205ENST00000593337 ATAD2BQ9ULI0 1458 aa34.19■■■■□ 3.06
IRF3-205ENST00000593337 PEG3Q9GZU2 1588 aa34.19■■■■□ 3.06
IRF3-205ENST00000593337 SMARCA2P51531 1590 aa34.18■■■■□ 3.06
IRF3-205ENST00000593337 NCAPD3P42695 1498 aa34.12■■■■□ 3.05
IRF3-205ENST00000593337 HMGXB3Q12766 1538 aa34.05■■■■□ 3.04
IRF3-205ENST00000593337 WIZO95785 1651 aa33.96■■■■□ 3.03
IRF3-205ENST00000593337 RSF1Q96T23 1441 aaPredicted RBP33.94■■■■□ 3.02
IRF3-205ENST00000593337 BAZ1BQ9UIG0 1483 aaKnown RBP33.91■■■■□ 3.02
IRF3-205ENST00000593337 TOP2AP11388 1531 aaKnown RBP33.6■■■□□ 2.97
IRF3-205ENST00000593337 NESP48681 1621 aa33.24■■■□□ 2.91
IRF3-205ENST00000593337 LAMC3Q9Y6N6 1575 aa33.24■■■□□ 2.91
IRF3-205ENST00000593337 CCDC88BA6NC98 1476 aa33.14■■■□□ 2.9
IRF3-205ENST00000593337 SUPT5HO00267 1087 aaKnown RBP33.11■■■□□ 2.89
IRF3-205ENST00000593337 CADPSQ9ULU8 1353 aa33.1■■■□□ 2.89
IRF3-205ENST00000593337 CFTRP13569 1480 aa33■■■□□ 2.87
IRF3-205ENST00000593337 PRDM2Q13029 1718 aa32.97■■■□□ 2.87
IRF3-205ENST00000593337 KIF21AQ7Z4S6 1674 aa32.97■■■□□ 2.87
IRF3-205ENST00000593337 ERCC6Q03468 1493 aa32.95■■■□□ 2.87
IRF3-205ENST00000593337 PDS5BQ9NTI5 1447 aa32.9■■■□□ 2.86
IRF3-205ENST00000593337 THOC2Q8NI27 1593 aaKnown RBP32.79■■■□□ 2.84
IRF3-205ENST00000593337 FANCD2Q9BXW9 1451 aa32.75■■■□□ 2.83
IRF3-205ENST00000593337 CEP164Q9UPV0 1460 aa32.7■■■□□ 2.83
IRF3-205ENST00000593337 MRC2Q9UBG0 1479 aa32.61■■■□□ 2.81
IRF3-205ENST00000593337 CUX2O14529 1486 aa32.59■■■□□ 2.81
IRF3-205ENST00000593337 WDR62O43379 1518 aa32.55■■■□□ 2.8
IRF3-205ENST00000593337 URB2Q14146 1524 aaKnown RBP32.45■■■□□ 2.78
IRF3-205ENST00000593337 DNMBPQ6XZF7 1577 aa32.3■■■□□ 2.76
IRF3-205ENST00000593337 TOPBP1Q92547 1522 aa32.29■■■□□ 2.76
IRF3-205ENST00000593337 ABCC8Q09428 1581 aa32.26■■■□□ 2.75
IRF3-205ENST00000593337 CUX1P39880 1505 aa32.16■■■□□ 2.74
IRF3-205ENST00000593337 POLA1P09884 1462 aaPredicted RBP32.03■■■□□ 2.72
IRF3-205ENST00000593337 BIVM-ERCC5R4GMW8 1640 aa32.01■■■□□ 2.72
IRF3-205ENST00000593337 IFT140Q96RY7 1462 aa31.99■■■□□ 2.71
IRF3-205ENST00000593337 FGD5Q6ZNL6 1462 aa31.98■■■□□ 2.71
IRF3-205ENST00000593337 TARBP1Q13395 1621 aaKnown RBP31.98■■■□□ 2.71
IRF3-205ENST00000593337 WRNQ14191 1432 aaPredicted RBP eCLIP31.98■■■□□ 2.71
IRF3-205ENST00000593337 SYNJ1O43426 1573 aa31.98■■■□□ 2.71
IRF3-205ENST00000593337 TOP2BQ02880 1626 aa31.97■■■□□ 2.71
IRF3-205ENST00000593337 WDR97A6NE52 1622 aa31.86■■■□□ 2.69
IRF3-205ENST00000593337 RAD54L2Q9Y4B4 1467 aa31.85■■■□□ 2.69
IRF3-205ENST00000593337 ZNF608Q9ULD9 1512 aaPredicted RBP31.85■■■□□ 2.69
IRF3-205ENST00000593337 SOGA1O94964 1423 aa31.83■■■□□ 2.69
IRF3-205ENST00000593337 EIF4G3O43432 1585 aaKnown RBP31.81■■■□□ 2.68
IRF3-205ENST00000593337 ABCA10Q8WWZ4 1543 aa31.7■■■□□ 2.67
IRF3-205ENST00000593337 AQRO60306 1485 aaKnown RBP eCLIP31.65■■■□□ 2.662e-9■■■■□ 26.5
IRF3-205ENST00000593337 ABCA5Q8WWZ7 1642 aa31.62■■■□□ 2.65
IRF3-205ENST00000593337 TDRD9Q8NDG6 1382 aaKnown RBP31.6■■■□□ 2.65
IRF3-205ENST00000593337 PBRM1Q86U86 1689 aa31.57■■■□□ 2.64
IRF3-205ENST00000593337 GAPVD1Q14C86 1478 aa31.5■■■□□ 2.63
IRF3-205ENST00000593337 GRIN2BQ13224 1484 aa31.46■■■□□ 2.63
IRF3-205ENST00000593337 SNAPC4Q5SXM2 1469 aa31.41■■■□□ 2.62
IRF3-205ENST00000593337 CHD1O14646 1710 aa31.4■■■□□ 2.62
IRF3-205ENST00000593337 MAGI1Q96QZ7 1491 aaPredicted RBP31.39■■■□□ 2.62
IRF3-205ENST00000593337 ERICH3Q5RHP9 1530 aa31.33■■■□□ 2.61
IRF3-205ENST00000593337 ADAMTS12P58397 1594 aa31.29■■■□□ 2.6
IRF3-205ENST00000593337 KIF27Q86VH2 1401 aa31.26■■■□□ 2.6
IRF3-205ENST00000593337 TRIM41Q8WV44 630 aa31.26■■■□□ 2.59
IRF3-205ENST00000593337 SYNJ2O15056 1496 aa31.25■■■□□ 2.59
IRF3-205ENST00000593337 DNAJC5Q9H3Z4 198 aa31.18■■■□□ 2.58
IRF3-205ENST00000593337 OSCARQ8IYS5 282 aa31.14■■■□□ 2.58
IRF3-205ENST00000593337 FHAD1B1AJZ9 1412 aa31.14■■■□□ 2.58
IRF3-205ENST00000593337 CUL7Q14999 1698 aa31.13■■■□□ 2.57
IRF3-205ENST00000593337 CHIC1Q5VXU3 224 aa31.11■■■□□ 2.57
IRF3-205ENST00000593337 RUSC2Q8N2Y8 1516 aa31.1■■■□□ 2.57
IRF3-205ENST00000593337 IGF1RP08069 1367 aa31.1■■■□□ 2.57
IRF3-205ENST00000593337 FBLN2P98095 1184 aa31.1■■■□□ 2.57
IRF3-205ENST00000593337 GRIN2AQ12879 1464 aa31.08■■■□□ 2.57
IRF3-205ENST00000593337 CHMP7Q8WUX9 453 aaPredicted RBP31.08■■■□□ 2.57
IRF3-205ENST00000593337 CLASP1Q7Z460 1538 aa31.02■■■□□ 2.56
IRF3-205ENST00000593337 CEP170Q5SW79 1584 aa30.97■■■□□ 2.55
IRF3-205ENST00000593337 NUP160Q12769 1436 aa30.95■■■□□ 2.54
IRF3-205ENST00000593337 CARMIL1Q5VZK9 1371 aa30.92■■■□□ 2.54
IRF3-205ENST00000593337 EEA1Q15075 1411 aa30.85■■■□□ 2.53
IRF3-205ENST00000593337 RAPGEF2Q9Y4G8 1499 aa30.8■■■□□ 2.52
IRF3-205ENST00000593337 RIMBP3CA6NJZ7 1639 aa30.8■■■□□ 2.52
IRF3-205ENST00000593337 RIMBP3BA6NNM3 1639 aa30.8■■■□□ 2.52
IRF3-205ENST00000593337 RIMBP3Q9UFD9 1639 aa30.8■■■□□ 2.52
IRF3-205ENST00000593337 PRXQ9BXM0 1461 aa30.78■■■□□ 2.52
IRF3-205ENST00000593337 ARHGEF11O15085 1522 aa30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms