Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
DHX40Q8IX18 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.35■■■□□ 2.45
DHX40Q8IX18 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
DHX40Q8IX18 AC139426.1-201ENST00000568218 2529 ntBASIC30.35■■■□□ 2.45
DHX40Q8IX18 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
DHX40Q8IX18 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
DHX40Q8IX18 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
DHX40Q8IX18 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
DHX40Q8IX18 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.29■■■□□ 2.44
DHX40Q8IX18 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
DHX40Q8IX18 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
DHX40Q8IX18 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
DHX40Q8IX18 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
DHX40Q8IX18 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.44
DHX40Q8IX18 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
DHX40Q8IX18 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
DHX40Q8IX18 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
DHX40Q8IX18 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
DHX40Q8IX18 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
DHX40Q8IX18 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.22■■■□□ 2.43
DHX40Q8IX18 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.22■■■□□ 2.43
DHX40Q8IX18 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
DHX40Q8IX18 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
DHX40Q8IX18 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
DHX40Q8IX18 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
DHX40Q8IX18 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.21■■■□□ 2.43
DHX40Q8IX18 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
DHX40Q8IX18 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
DHX40Q8IX18 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
DHX40Q8IX18 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
DHX40Q8IX18 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.19■■■□□ 2.42
DHX40Q8IX18 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
DHX40Q8IX18 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
DHX40Q8IX18 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.18■■■□□ 2.42
DHX40Q8IX18 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
DHX40Q8IX18 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
DHX40Q8IX18 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
DHX40Q8IX18 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
DHX40Q8IX18 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.42
DHX40Q8IX18 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
DHX40Q8IX18 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.14■■■□□ 2.41
DHX40Q8IX18 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.13■■■□□ 2.41
DHX40Q8IX18 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.13■■■□□ 2.41
DHX40Q8IX18 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.13■■■□□ 2.41
DHX40Q8IX18 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
DHX40Q8IX18 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
DHX40Q8IX18 ST7-AS1-201ENST00000456775 1889 ntBASIC30.12■■■□□ 2.41
DHX40Q8IX18 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
DHX40Q8IX18 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
DHX40Q8IX18 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
DHX40Q8IX18 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
DHX40Q8IX18 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
DHX40Q8IX18 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.08■■■□□ 2.41
DHX40Q8IX18 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
DHX40Q8IX18 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.07■■■□□ 2.4
DHX40Q8IX18 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
DHX40Q8IX18 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
DHX40Q8IX18 AL161658.1-201ENST00000623641 1967 ntBASIC30.04■■■□□ 2.4
DHX40Q8IX18 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
DHX40Q8IX18 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.04■■■□□ 2.4
DHX40Q8IX18 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
DHX40Q8IX18 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.01■■■□□ 2.4
DHX40Q8IX18 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
DHX40Q8IX18 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
DHX40Q8IX18 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
DHX40Q8IX18 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
DHX40Q8IX18 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
DHX40Q8IX18 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
DHX40Q8IX18 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
DHX40Q8IX18 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC29.95■■■□□ 2.39
DHX40Q8IX18 AP002365.1-201ENST00000603448 772 ntBASIC29.95■■■□□ 2.39
DHX40Q8IX18 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
DHX40Q8IX18 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
DHX40Q8IX18 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
DHX40Q8IX18 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.91■■■□□ 2.38
DHX40Q8IX18 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
DHX40Q8IX18 DYNLL1-208ENST00000550178 581 ntBASIC29.9■■■□□ 2.38
DHX40Q8IX18 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
DHX40Q8IX18 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
DHX40Q8IX18 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
DHX40Q8IX18 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC29.87■■■□□ 2.37
DHX40Q8IX18 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC29.87■■■□□ 2.37
DHX40Q8IX18 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
DHX40Q8IX18 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
DHX40Q8IX18 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
DHX40Q8IX18 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.84■■■□□ 2.37
DHX40Q8IX18 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC29.83■■■□□ 2.37
DHX40Q8IX18 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
DHX40Q8IX18 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
DHX40Q8IX18 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
DHX40Q8IX18 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
DHX40Q8IX18 EBPL-203ENST00000378270 579 ntTSL 2 BASIC29.82■■■□□ 2.36
DHX40Q8IX18 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
DHX40Q8IX18 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.82■■■□□ 2.36
DHX40Q8IX18 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.81■■■□□ 2.36
DHX40Q8IX18 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.81■■■□□ 2.36
DHX40Q8IX18 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
DHX40Q8IX18 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC29.8■■■□□ 2.36
DHX40Q8IX18 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.8■■■□□ 2.36
DHX40Q8IX18 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC29.79■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms