RNA–Protein interactions for RNA: ENST00000378892.5

SIGMAR1-203, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 2 BASIC

Gene SIGMAR1, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-203ENST00000378892 NISCHQ9Y2I1 1504 aa58.01■■■■■ 6.88
SIGMAR1-203ENST00000378892 CCDC180Q9P1Z9 1646 aa50.49■■■■■ 5.67
SIGMAR1-203ENST00000378892 ZCCHC6Q5VYS8 1495 aaKnown RBP48.78■■■■■ 5.4
SIGMAR1-203ENST00000378892 DCAF1Q9Y4B6 1507 aa48.02■■■■■ 5.28
SIGMAR1-203ENST00000378892 DCAF8L2P0C7V8 631 aa47.83■■■■■ 5.25
SIGMAR1-203ENST00000378892 ABCC9O60706 1549 aa47.53■■■■■ 5.2
SIGMAR1-203ENST00000378892 SHROOM4Q9ULL8 1493 aa47.4■■■■■ 5.18
SIGMAR1-203ENST00000378892 MYO15BQ96JP2 1530 aa47.39■■■■■ 5.18
SIGMAR1-203ENST00000378892 NACADO15069 1562 aa47.02■■■■■ 5.12
SIGMAR1-203ENST00000378892 RB1CC1Q8TDY2 1594 aa46.56■■■■■ 5.04
SIGMAR1-203ENST00000378892 SCRIBQ14160 1630 aa46.41■■■■■ 5.02
SIGMAR1-203ENST00000378892 SUPT5HO00267 1087 aaKnown RBP45.75■■■■■ 4.91
SIGMAR1-203ENST00000378892 UNC13AQ9UPW8 1703 aa45.45■■■■■ 4.87
SIGMAR1-203ENST00000378892 RSF1Q96T23 1441 aaPredicted RBP45.08■■■■■ 4.81
SIGMAR1-203ENST00000378892 BICRAQ9NZM4 1560 aa45.06■■■■■ 4.8
SIGMAR1-203ENST00000378892 CECR2Q9BXF3 1484 aa45■■■■■ 4.8
SIGMAR1-203ENST00000378892 PABPN1Q86U42 306 aaKnown RBP eCLIP44.86■■■■■ 4.777e-7■■■■□ 25.6
SIGMAR1-203ENST00000378892 BAZ1AQ9NRL2 1556 aaPredicted RBP44.81■■■■■ 4.76
SIGMAR1-203ENST00000378892 MROH2BQ7Z745 1585 aa44.79■■■■■ 4.76
SIGMAR1-203ENST00000378892 SMARCA4P51532 1647 aa44.53■■■■■ 4.72
SIGMAR1-203ENST00000378892 WIZO95785 1651 aa44.4■■■■■ 4.7
SIGMAR1-203ENST00000378892 CHIC1Q5VXU3 224 aa44.03■■■■■ 4.64
SIGMAR1-203ENST00000378892 TOP2AP11388 1531 aaKnown RBP44.03■■■■■ 4.64
SIGMAR1-203ENST00000378892 PEG3Q9GZU2 1588 aa44.01■■■■■ 4.64
SIGMAR1-203ENST00000378892 SMARCA2P51531 1590 aa43.79■■■■■ 4.6
SIGMAR1-203ENST00000378892 ATAD2BQ9ULI0 1458 aa43.78■■■■■ 4.6
SIGMAR1-203ENST00000378892 EIF4G1Q04637 1599 aaKnown RBP43.73■■■■■ 4.59
SIGMAR1-203ENST00000378892 BAZ1BQ9UIG0 1483 aaKnown RBP43.56■■■■■ 4.56
SIGMAR1-203ENST00000378892 CCDC88BA6NC98 1476 aa43.55■■■■■ 4.56
SIGMAR1-203ENST00000378892 NCAPD3P42695 1498 aa43.39■■■■■ 4.54
SIGMAR1-203ENST00000378892 HMGXB3Q12766 1538 aa43.35■■■■■ 4.53
SIGMAR1-203ENST00000378892 TRIM41Q8WV44 630 aa43.06■■■■■ 4.48
SIGMAR1-203ENST00000378892 CC2D2AQ9P2K1 1620 aa43.01■■■■■ 4.48
SIGMAR1-203ENST00000378892 ABCC8Q09428 1581 aa42.66■■■■■ 4.42
SIGMAR1-203ENST00000378892 CFTRP13569 1480 aa42.47■■■■■ 4.39
SIGMAR1-203ENST00000378892 WRNQ14191 1432 aaPredicted RBP eCLIP42.46■■■■■ 4.39
SIGMAR1-203ENST00000378892 LOC105371045A0A1W2PR82 267 aa42.44■■■■■ 4.38
SIGMAR1-203ENST00000378892 CADPSQ9ULU8 1353 aa42.3■■■■■ 4.36
SIGMAR1-203ENST00000378892 FAM9AQ8IZU1 332 aaPredicted RBP42.2■■■■■ 4.35
SIGMAR1-203ENST00000378892 SYNJ1O43426 1573 aa42.2■■■■■ 4.35
SIGMAR1-203ENST00000378892 PRDM2Q13029 1718 aa42.18■■■■■ 4.34
SIGMAR1-203ENST00000378892 TOP2BQ02880 1626 aa42.06■■■■■ 4.32
SIGMAR1-203ENST00000378892 EEA1Q15075 1411 aa42.03■■■■■ 4.32
SIGMAR1-203ENST00000378892 BIVM-ERCC5R4GMW8 1640 aa42■■■■■ 4.31
SIGMAR1-203ENST00000378892 SOGA1O94964 1423 aa41.93■■■■■ 4.3
SIGMAR1-203ENST00000378892 LAMC3Q9Y6N6 1575 aa41.88■■■■■ 4.29
SIGMAR1-203ENST00000378892 CUX1P39880 1505 aa41.87■■■■■ 4.29
SIGMAR1-203ENST00000378892 FANCD2Q9BXW9 1451 aa41.82■■■■■ 4.28
SIGMAR1-203ENST00000378892 NESP48681 1621 aa41.76■■■■■ 4.28
SIGMAR1-203ENST00000378892 DNAJC5BQ9UF47 199 aa41.76■■■■■ 4.28
SIGMAR1-203ENST00000378892 RUSC2Q8N2Y8 1516 aa41.72■■■■■ 4.27
SIGMAR1-203ENST00000378892 CSRNP3Q8WYN3 585 aa41.72■■■■■ 4.27
SIGMAR1-203ENST00000378892 PDS5BQ9NTI5 1447 aa41.58■■■■■ 4.25
SIGMAR1-203ENST00000378892 CEP164Q9UPV0 1460 aa41.55■■■■■ 4.24
SIGMAR1-203ENST00000378892 EHMT2Q96KQ7 1210 aa41.55■■■■■ 4.24
SIGMAR1-203ENST00000378892 DNMBPQ6XZF7 1577 aa41.48■■■■■ 4.23
SIGMAR1-203ENST00000378892 PCGF6Q9BYE7 350 aa41.44■■■■■ 4.22
SIGMAR1-203ENST00000378892 GOLGA3Q08378 1498 aa41.41■■■■■ 4.22
SIGMAR1-203ENST00000378892 FGD5Q6ZNL6 1462 aa41.41■■■■■ 4.22
SIGMAR1-203ENST00000378892 KIF27Q86VH2 1401 aa41.4■■■■■ 4.22
SIGMAR1-203ENST00000378892 KIF21BO75037 1637 aa41.38■■■■■ 4.22
SIGMAR1-203ENST00000378892 TOPBP1Q92547 1522 aa41.37■■■■■ 4.21
SIGMAR1-203ENST00000378892 TNIKQ9UKE5 1360 aa41.31■■■■■ 4.2
SIGMAR1-203ENST00000378892 URB2Q14146 1524 aaKnown RBP41.24■■■■■ 4.19
SIGMAR1-203ENST00000378892 KIF21AQ7Z4S6 1674 aa41.23■■■■■ 4.19
SIGMAR1-203ENST00000378892 TRIM26Q12899 539 aaPredicted RBP41.21■■■■■ 4.19
SIGMAR1-203ENST00000378892 UBTFP17480 764 aaKnown RBP41.2■■■■■ 4.19
SIGMAR1-203ENST00000378892 CUX2O14529 1486 aa41.2■■■■■ 4.19
SIGMAR1-203ENST00000378892 POLA1P09884 1462 aaPredicted RBP41.18■■■■■ 4.18
SIGMAR1-203ENST00000378892 PRXQ9BXM0 1461 aa41.13■■■■■ 4.17
SIGMAR1-203ENST00000378892 ERICH3Q5RHP9 1530 aa41.1■■■■■ 4.17
SIGMAR1-203ENST00000378892 RAPGEF2Q9Y4G8 1499 aa41.08■■■■■ 4.17
SIGMAR1-203ENST00000378892 ABCA10Q8WWZ4 1543 aa41.08■■■■■ 4.17
SIGMAR1-203ENST00000378892 CEP162Q5TB80 1403 aa41.08■■■■■ 4.17
SIGMAR1-203ENST00000378892 RAD54L2Q9Y4B4 1467 aa41.02■■■■■ 4.16
SIGMAR1-203ENST00000378892 MRC2Q9UBG0 1479 aa41.01■■■■■ 4.15
SIGMAR1-203ENST00000378892 IGF1RP08069 1367 aa40.95■■■■■ 4.15
SIGMAR1-203ENST00000378892 HRCP23327 699 aa40.92■■■■■ 4.14
SIGMAR1-203ENST00000378892 WDR97A6NE52 1622 aa40.85■■■■■ 4.13
SIGMAR1-203ENST00000378892 ERCC6Q03468 1493 aa40.8■■■■■ 4.12
SIGMAR1-203ENST00000378892 CARMIL1Q5VZK9 1371 aa40.78■■■■■ 4.12
SIGMAR1-203ENST00000378892 WDR62O43379 1518 aa40.76■■■■■ 4.12
SIGMAR1-203ENST00000378892 CLIP1P30622 1438 aa40.74■■■■■ 4.11
SIGMAR1-203ENST00000378892 TARBP1Q13395 1621 aaKnown RBP40.7■■■■■ 4.11
SIGMAR1-203ENST00000378892 ABCA5Q8WWZ7 1642 aa40.68■■■■■ 4.1
SIGMAR1-203ENST00000378892 CUL7Q14999 1698 aa40.64■■■■■ 4.1
SIGMAR1-203ENST00000378892 GAPVD1Q14C86 1478 aa40.63■■■■■ 4.09
SIGMAR1-203ENST00000378892 TDRD9Q8NDG6 1382 aaKnown RBP40.62■■■■■ 4.09
SIGMAR1-203ENST00000378892 IFT140Q96RY7 1462 aa40.56■■■■■ 4.08
SIGMAR1-203ENST00000378892 THOC2Q8NI27 1593 aaKnown RBP40.55■■■■■ 4.08
SIGMAR1-203ENST00000378892 PPARGC1BQ86YN6 1023 aaKnown RBP40.43■■■■■ 4.06
SIGMAR1-203ENST00000378892 VPS8Q8N3P4 1428 aa40.41■■■■■ 4.06
SIGMAR1-203ENST00000378892 RANGAP1P46060 587 aaPredicted RBP40.39■■■■■ 4.06
SIGMAR1-203ENST00000378892 AQRO60306 1485 aaKnown RBP eCLIP40.32■■■■■ 4.052e-8■■■■■ 30.3
SIGMAR1-203ENST00000378892 PBRM1Q86U86 1689 aa40.31■■■■■ 4.04
SIGMAR1-203ENST00000378892 GRIN2BQ13224 1484 aa40.3■■■■■ 4.04
SIGMAR1-203ENST00000378892 ARAP1Q96P48 1450 aa40.26■■■■■ 4.04
SIGMAR1-203ENST00000378892 ZNF608Q9ULD9 1512 aaPredicted RBP40.24■■■■■ 4.03
SIGMAR1-203ENST00000378892 ARHGAP35Q9NRY4 1499 aa40.23■■■■■ 4.03
SIGMAR1-203ENST00000378892 FHAD1B1AJZ9 1412 aa40.22■■■■■ 4.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms