RNA–Protein interactions for RNA: ENST00000389224.7

PDPK1-203, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 2 BASIC

Gene PDPK1, Length 2,416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-203ENST00000389224 NISCHQ9Y2I1 1504 aa55.84■■■■■ 6.53
PDPK1-203ENST00000389224 CCDC180Q9P1Z9 1646 aa47.74■■■■■ 5.23
PDPK1-203ENST00000389224 SHROOM4Q9ULL8 1493 aa47.27■■■■■ 5.16
PDPK1-203ENST00000389224 ZCCHC6Q5VYS8 1495 aaKnown RBP47.08■■■■■ 5.13
PDPK1-203ENST00000389224 DCAF8L2P0C7V8 631 aa46.69■■■■■ 5.06
PDPK1-203ENST00000389224 SUPT5HO00267 1087 aaKnown RBP45.97■■■■■ 4.95
PDPK1-203ENST00000389224 DCAF1Q9Y4B6 1507 aa45.71■■■■■ 4.91
PDPK1-203ENST00000389224 ABCC9O60706 1549 aa45.04■■■■■ 4.8
PDPK1-203ENST00000389224 SCRIBQ14160 1630 aa44.79■■■■■ 4.76
PDPK1-203ENST00000389224 MYO15BQ96JP2 1530 aa44.63■■■■■ 4.74
PDPK1-203ENST00000389224 NACADO15069 1562 aa44.32■■■■■ 4.69
PDPK1-203ENST00000389224 CHIC1Q5VXU3 224 aa44.27■■■■■ 4.68
PDPK1-203ENST00000389224 RSF1Q96T23 1441 aaPredicted RBP43.95■■■■■ 4.63
PDPK1-203ENST00000389224 RB1CC1Q8TDY2 1594 aa43.78■■■■■ 4.6
PDPK1-203ENST00000389224 CECR2Q9BXF3 1484 aa43.72■■■■■ 4.59
PDPK1-203ENST00000389224 MROH2BQ7Z745 1585 aa43.45■■■■■ 4.55
PDPK1-203ENST00000389224 UNC13AQ9UPW8 1703 aa43.24■■■■■ 4.51
PDPK1-203ENST00000389224 WIZO95785 1651 aa43.2■■■■■ 4.51
PDPK1-203ENST00000389224 LOC105371045A0A1W2PR82 267 aa43.04■■■■■ 4.48
PDPK1-203ENST00000389224 PABPN1Q86U42 306 aaKnown RBP eCLIP42.98■■■■■ 4.47
PDPK1-203ENST00000389224 BAZ1AQ9NRL2 1556 aaPredicted RBP42.91■■■■■ 4.46
PDPK1-203ENST00000389224 TRIM41Q8WV44 630 aa42.79■■■■■ 4.44
PDPK1-203ENST00000389224 BICRAQ9NZM4 1560 aa42.71■■■■■ 4.43
PDPK1-203ENST00000389224 SMARCA4P51532 1647 aa42.69■■■■■ 4.42
PDPK1-203ENST00000389224 FAM9AQ8IZU1 332 aaPredicted RBP42.54■■■■■ 4.4
PDPK1-203ENST00000389224 TOP2AP11388 1531 aaKnown RBP42.41■■■■■ 4.38
PDPK1-203ENST00000389224 EHMT2Q96KQ7 1210 aa42.3■■■■■ 4.36
PDPK1-203ENST00000389224 CCDC88BA6NC98 1476 aa42.28■■■■■ 4.36
PDPK1-203ENST00000389224 EIF4G1Q04637 1599 aaKnown RBP42.21■■■■■ 4.35
PDPK1-203ENST00000389224 SMARCA2P51531 1590 aa42.2■■■■■ 4.35
PDPK1-203ENST00000389224 PCGF6Q9BYE7 350 aa42.19■■■■■ 4.34
PDPK1-203ENST00000389224 ABCC8Q09428 1581 aa42.01■■■■■ 4.31
PDPK1-203ENST00000389224 PEG3Q9GZU2 1588 aa41.84■■■■■ 4.29
PDPK1-203ENST00000389224 ATAD2BQ9ULI0 1458 aa41.79■■■■■ 4.28
PDPK1-203ENST00000389224 BAZ1BQ9UIG0 1483 aaKnown RBP41.63■■■■■ 4.25
PDPK1-203ENST00000389224 HRCP23327 699 aa41.55■■■■■ 4.24
PDPK1-203ENST00000389224 SOGA1O94964 1423 aa41.44■■■■■ 4.23
PDPK1-203ENST00000389224 TRIM26Q12899 539 aaPredicted RBP41.43■■■■■ 4.22
PDPK1-203ENST00000389224 RUSC2Q8N2Y8 1516 aa41.33■■■■■ 4.21
PDPK1-203ENST00000389224 WRNQ14191 1432 aaPredicted RBP eCLIP41.28■■■■■ 4.2
PDPK1-203ENST00000389224 PPARGC1BQ86YN6 1023 aaKnown RBP41.22■■■■■ 4.19
PDPK1-203ENST00000389224 SYNJ1O43426 1573 aa41.16■■■■■ 4.18
PDPK1-203ENST00000389224 CSRNP3Q8WYN3 585 aa41.07■■■■■ 4.16
PDPK1-203ENST00000389224 NCAPD3P42695 1498 aa41.05■■■■■ 4.16
PDPK1-203ENST00000389224 HMGXB3Q12766 1538 aa40.96■■■■■ 4.15
PDPK1-203ENST00000389224 UBTFP17480 764 aaKnown RBP40.89■■■■■ 4.14
PDPK1-203ENST00000389224 EEA1Q15075 1411 aa40.88■■■■■ 4.13
PDPK1-203ENST00000389224 CEP162Q5TB80 1403 aa40.83■■■■■ 4.13
PDPK1-203ENST00000389224 TNIKQ9UKE5 1360 aa40.76■■■■■ 4.12
PDPK1-203ENST00000389224 TTBK1Q5TCY1 1321 aaPredicted RBP40.71■■■■■ 4.11
PDPK1-203ENST00000389224 GOLGA3Q08378 1498 aa40.67■■■■■ 4.1
PDPK1-203ENST00000389224 TOP2BQ02880 1626 aa40.64■■■■■ 4.1
PDPK1-203ENST00000389224 CFTRP13569 1480 aa40.54■■■■■ 4.08
PDPK1-203ENST00000389224 CC2D2AQ9P2K1 1620 aa40.51■■■■■ 4.07
PDPK1-203ENST00000389224 CEP164Q9UPV0 1460 aa40.5■■■■■ 4.07
PDPK1-203ENST00000389224 BIVM-ERCC5R4GMW8 1640 aa40.49■■■■■ 4.07
PDPK1-203ENST00000389224 CUX1P39880 1505 aa40.49■■■■■ 4.07
PDPK1-203ENST00000389224 RAPGEF2Q9Y4G8 1499 aa40.44■■■■■ 4.07
PDPK1-203ENST00000389224 KIF21BO75037 1637 aa40.44■■■■■ 4.06
PDPK1-203ENST00000389224 RANGAP1P46060 587 aaPredicted RBP40.43■■■■■ 4.06
PDPK1-203ENST00000389224 CADPSQ9ULU8 1353 aa40.25■■■■■ 4.03
PDPK1-203ENST00000389224 CLIP1P30622 1438 aa40.22■■■■■ 4.03
PDPK1-203ENST00000389224 PRDM2Q13029 1718 aa40.13■■■■■ 4.02
PDPK1-203ENST00000389224 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.1■■■■■ 4.01
PDPK1-203ENST00000389224 PRXQ9BXM0 1461 aa40.06■■■■■ 4
PDPK1-203ENST00000389224 KIF27Q86VH2 1401 aa40.04■■■■■ 4
PDPK1-203ENST00000389224 ZEB1P37275 1124 aaPredicted RBP40.03■■■■■ 4
PDPK1-203ENST00000389224 NESP48681 1621 aa39.95■■■■□ 3.99
PDPK1-203ENST00000389224 DNAJC5BQ9UF47 199 aa39.92■■■■□ 3.98
PDPK1-203ENST00000389224 VPS8Q8N3P4 1428 aa39.92■■■■□ 3.98
PDPK1-203ENST00000389224 ERICH3Q5RHP9 1530 aa39.9■■■■□ 3.98
PDPK1-203ENST00000389224 CUX2O14529 1486 aa39.89■■■■□ 3.98
PDPK1-203ENST00000389224 FANCD2Q9BXW9 1451 aa39.88■■■■□ 3.97
PDPK1-203ENST00000389224 FGD5Q6ZNL6 1462 aa39.87■■■■□ 3.97
PDPK1-203ENST00000389224 CCER1Q8TC90 406 aaPredicted RBP39.83■■■■□ 3.97
PDPK1-203ENST00000389224 IGF1RP08069 1367 aa39.73■■■■□ 3.95
PDPK1-203ENST00000389224 APLP2Q06481 763 aa39.7■■■■□ 3.95
PDPK1-203ENST00000389224 ARAP1Q96P48 1450 aa39.69■■■■□ 3.94
PDPK1-203ENST00000389224 RAD54L2Q9Y4B4 1467 aa39.63■■■■□ 3.93
PDPK1-203ENST00000389224 HNRNPUL2Q1KMD3 747 aaKnown RBP39.59■■■■□ 3.93
PDPK1-203ENST00000389224 TOPBP1Q92547 1522 aa39.54■■■■□ 3.92
PDPK1-203ENST00000389224 CARMIL1Q5VZK9 1371 aa39.54■■■■□ 3.92
PDPK1-203ENST00000389224 DNMBPQ6XZF7 1577 aa39.52■■■■□ 3.92
PDPK1-203ENST00000389224 POLA1P09884 1462 aaPredicted RBP39.49■■■■□ 3.91
PDPK1-203ENST00000389224 ARHGAP35Q9NRY4 1499 aa39.48■■■■□ 3.91
PDPK1-203ENST00000389224 KANK4Q5T7N3 995 aaPredicted RBP39.47■■■■□ 3.91
PDPK1-203ENST00000389224 LAMC3Q9Y6N6 1575 aa39.39■■■■□ 3.9
PDPK1-203ENST00000389224 URB2Q14146 1524 aaKnown RBP39.38■■■■□ 3.89
PDPK1-203ENST00000389224 ABCA10Q8WWZ4 1543 aa39.32■■■■□ 3.89
PDPK1-203ENST00000389224 P3H3Q8IVL6 736 aa39.25■■■■□ 3.87
PDPK1-203ENST00000389224 KIF21AQ7Z4S6 1674 aa39.19■■■■□ 3.86
PDPK1-203ENST00000389224 TDRD9Q8NDG6 1382 aaKnown RBP39.19■■■■□ 3.86
PDPK1-203ENST00000389224 PDS5BQ9NTI5 1447 aa39.18■■■■□ 3.86
PDPK1-203ENST00000389224 WDR97A6NE52 1622 aa39.04■■■■□ 3.84
PDPK1-203ENST00000389224 ATP1B4Q9UN42 357 aaPredicted RBP38.98■■■■□ 3.83
PDPK1-203ENST00000389224 FHOD3Q2V2M9 1422 aa38.96■■■■□ 3.83
PDPK1-203ENST00000389224 CUL7Q14999 1698 aa38.94■■■■□ 3.82
PDPK1-203ENST00000389224 GAPVD1Q14C86 1478 aa38.93■■■■□ 3.82
PDPK1-203ENST00000389224 ABCA5Q8WWZ7 1642 aa38.91■■■■□ 3.82
PDPK1-203ENST00000389224 ITGAEP38570 1179 aa38.88■■■■□ 3.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms