RNA–Protein interactions for RNA: ENST00000322019.13

TM6SF1-202, Transcript of transmembrane 6 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF1, Length 2,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-202ENST00000322019 NISCHQ9Y2I1 1504 aa59.16■■■■■ 7.06
TM6SF1-202ENST00000322019 CCDC180Q9P1Z9 1646 aa51.26■■■■■ 5.8
TM6SF1-202ENST00000322019 ZCCHC6Q5VYS8 1495 aaKnown RBP49.74■■■■■ 5.55
TM6SF1-202ENST00000322019 DCAF8L2P0C7V8 631 aa49.19■■■■■ 5.47
TM6SF1-202ENST00000322019 SHROOM4Q9ULL8 1493 aa48.89■■■■■ 5.42
TM6SF1-202ENST00000322019 ABCC9O60706 1549 aa48.7■■■■■ 5.39
TM6SF1-202ENST00000322019 DCAF1Q9Y4B6 1507 aa48.69■■■■■ 5.38
TM6SF1-202ENST00000322019 MYO15BQ96JP2 1530 aa47.96■■■■■ 5.27
TM6SF1-202ENST00000322019 NACADO15069 1562 aa47.74■■■■■ 5.23
TM6SF1-202ENST00000322019 SCRIBQ14160 1630 aa47.56■■■■■ 5.2
TM6SF1-202ENST00000322019 RB1CC1Q8TDY2 1594 aa47.32■■■■■ 5.17
TM6SF1-202ENST00000322019 SUPT5HO00267 1087 aaKnown RBP47.1■■■■■ 5.13
TM6SF1-202ENST00000322019 UNC13AQ9UPW8 1703 aa46.52■■■■■ 5.04
TM6SF1-202ENST00000322019 CECR2Q9BXF3 1484 aa46.16■■■■■ 4.98
TM6SF1-202ENST00000322019 PABPN1Q86U42 306 aaKnown RBP eCLIP46.1■■■■■ 4.97
TM6SF1-202ENST00000322019 RSF1Q96T23 1441 aaPredicted RBP46.09■■■■■ 4.97
TM6SF1-202ENST00000322019 BICRAQ9NZM4 1560 aa46.04■■■■■ 4.96
TM6SF1-202ENST00000322019 MROH2BQ7Z745 1585 aa45.85■■■■■ 4.93
TM6SF1-202ENST00000322019 BAZ1AQ9NRL2 1556 aaPredicted RBP45.6■■■■■ 4.89
TM6SF1-202ENST00000322019 WIZO95785 1651 aa45.51■■■■■ 4.88
TM6SF1-202ENST00000322019 SMARCA4P51532 1647 aa45.43■■■■■ 4.86
TM6SF1-202ENST00000322019 CHIC1Q5VXU3 224 aa45.05■■■■■ 4.8
TM6SF1-202ENST00000322019 TOP2AP11388 1531 aaKnown RBP44.87■■■■■ 4.77
TM6SF1-202ENST00000322019 PEG3Q9GZU2 1588 aa44.72■■■■■ 4.75
TM6SF1-202ENST00000322019 ATAD2BQ9ULI0 1458 aa44.65■■■■■ 4.74
TM6SF1-202ENST00000322019 EIF4G1Q04637 1599 aaKnown RBP44.62■■■■■ 4.73
TM6SF1-202ENST00000322019 CCDC88BA6NC98 1476 aa44.54■■■■■ 4.72
TM6SF1-202ENST00000322019 SMARCA2P51531 1590 aa44.53■■■■■ 4.72
TM6SF1-202ENST00000322019 BAZ1BQ9UIG0 1483 aaKnown RBP44.42■■■■■ 4.7
TM6SF1-202ENST00000322019 NCAPD3P42695 1498 aa44.13■■■■■ 4.65
TM6SF1-202ENST00000322019 TRIM41Q8WV44 630 aa44.09■■■■■ 4.65
TM6SF1-202ENST00000322019 HMGXB3Q12766 1538 aa44.04■■■■■ 4.64
TM6SF1-202ENST00000322019 CC2D2AQ9P2K1 1620 aa43.94■■■■■ 4.62
TM6SF1-202ENST00000322019 ABCC8Q09428 1581 aa43.82■■■■■ 4.61
TM6SF1-202ENST00000322019 LOC105371045A0A1W2PR82 267 aa43.55■■■■■ 4.56
TM6SF1-202ENST00000322019 FAM9AQ8IZU1 332 aaPredicted RBP43.55■■■■■ 4.56
TM6SF1-202ENST00000322019 WRNQ14191 1432 aaPredicted RBP eCLIP43.34■■■■■ 4.53
TM6SF1-202ENST00000322019 CFTRP13569 1480 aa43.27■■■■■ 4.52
TM6SF1-202ENST00000322019 SYNJ1O43426 1573 aa43.23■■■■■ 4.51
TM6SF1-202ENST00000322019 EHMT2Q96KQ7 1210 aa43.13■■■■■ 4.5
TM6SF1-202ENST00000322019 DNAJC5BQ9UF47 199 aa43.13■■■■■ 4.5
TM6SF1-202ENST00000322019 CADPSQ9ULU8 1353 aa43.1■■■■■ 4.49
TM6SF1-202ENST00000322019 SOGA1O94964 1423 aa43.04■■■■■ 4.48
TM6SF1-202ENST00000322019 PRDM2Q13029 1718 aa42.93■■■■■ 4.46
TM6SF1-202ENST00000322019 RUSC2Q8N2Y8 1516 aa42.92■■■■■ 4.46
TM6SF1-202ENST00000322019 TOP2BQ02880 1626 aa42.88■■■■■ 4.46
TM6SF1-202ENST00000322019 NESP48681 1621 aa42.86■■■■■ 4.45
TM6SF1-202ENST00000322019 CUX1P39880 1505 aa42.83■■■■■ 4.45
TM6SF1-202ENST00000322019 BIVM-ERCC5R4GMW8 1640 aa42.79■■■■■ 4.44
TM6SF1-202ENST00000322019 FANCD2Q9BXW9 1451 aa42.67■■■■■ 4.42
TM6SF1-202ENST00000322019 EEA1Q15075 1411 aa42.64■■■■■ 4.42
TM6SF1-202ENST00000322019 CSRNP3Q8WYN3 585 aa42.62■■■■■ 4.41
TM6SF1-202ENST00000322019 LAMC3Q9Y6N6 1575 aa42.55■■■■■ 4.4
TM6SF1-202ENST00000322019 CEP164Q9UPV0 1460 aa42.33■■■■■ 4.37
TM6SF1-202ENST00000322019 FGD5Q6ZNL6 1462 aa42.32■■■■■ 4.36
TM6SF1-202ENST00000322019 PDS5BQ9NTI5 1447 aa42.27■■■■■ 4.36
TM6SF1-202ENST00000322019 DNMBPQ6XZF7 1577 aa42.24■■■■■ 4.35
TM6SF1-202ENST00000322019 GOLGA3Q08378 1498 aa42.23■■■■■ 4.35
TM6SF1-202ENST00000322019 TOPBP1Q92547 1522 aa42.22■■■■■ 4.35
TM6SF1-202ENST00000322019 UBTFP17480 764 aaKnown RBP42.22■■■■■ 4.35
TM6SF1-202ENST00000322019 KIF21AQ7Z4S6 1674 aa42.2■■■■■ 4.35
TM6SF1-202ENST00000322019 KIF27Q86VH2 1401 aa42.17■■■■■ 4.34
TM6SF1-202ENST00000322019 URB2Q14146 1524 aaKnown RBP42.17■■■■■ 4.34
TM6SF1-202ENST00000322019 KIF21BO75037 1637 aa42.17■■■■■ 4.34
TM6SF1-202ENST00000322019 TNIKQ9UKE5 1360 aa42.13■■■■■ 4.33
TM6SF1-202ENST00000322019 CUX2O14529 1486 aa42.11■■■■■ 4.33
TM6SF1-202ENST00000322019 RAPGEF2Q9Y4G8 1499 aa42.11■■■■■ 4.33
TM6SF1-202ENST00000322019 POLA1P09884 1462 aaPredicted RBP42.07■■■■■ 4.33
TM6SF1-202ENST00000322019 RAD54L2Q9Y4B4 1467 aa42.06■■■■■ 4.32
TM6SF1-202ENST00000322019 CEP162Q5TB80 1403 aa42.05■■■■■ 4.32
TM6SF1-202ENST00000322019 PRXQ9BXM0 1461 aa41.95■■■■■ 4.31
TM6SF1-202ENST00000322019 IGF1RP08069 1367 aa41.85■■■■■ 4.29
TM6SF1-202ENST00000322019 ABCA10Q8WWZ4 1543 aa41.84■■■■■ 4.29
TM6SF1-202ENST00000322019 ERICH3Q5RHP9 1530 aa41.81■■■■■ 4.28
TM6SF1-202ENST00000322019 PCGF6Q9BYE7 350 aa41.76■■■■■ 4.28
TM6SF1-202ENST00000322019 RANGAP1P46060 587 aaPredicted RBP41.75■■■■■ 4.27
TM6SF1-202ENST00000322019 MRC2Q9UBG0 1479 aa41.75■■■■■ 4.27
TM6SF1-202ENST00000322019 WDR97A6NE52 1622 aa41.66■■■■■ 4.26
TM6SF1-202ENST00000322019 PPARGC1BQ86YN6 1023 aaKnown RBP41.64■■■■■ 4.26
TM6SF1-202ENST00000322019 CLIP1P30622 1438 aa41.64■■■■■ 4.26
TM6SF1-202ENST00000322019 TDRD9Q8NDG6 1382 aaKnown RBP41.64■■■■■ 4.26
TM6SF1-202ENST00000322019 CARMIL1Q5VZK9 1371 aa41.63■■■■■ 4.26
TM6SF1-202ENST00000322019 ERCC6Q03468 1493 aa41.63■■■■■ 4.25
TM6SF1-202ENST00000322019 TARBP1Q13395 1621 aaKnown RBP41.54■■■■■ 4.24
TM6SF1-202ENST00000322019 WDR62O43379 1518 aa41.49■■■■■ 4.23
TM6SF1-202ENST00000322019 ABCA5Q8WWZ7 1642 aa41.49■■■■■ 4.23
TM6SF1-202ENST00000322019 TRIM26Q12899 539 aaPredicted RBP41.46■■■■■ 4.23
TM6SF1-202ENST00000322019 GAPVD1Q14C86 1478 aa41.45■■■■■ 4.23
TM6SF1-202ENST00000322019 THOC2Q8NI27 1593 aaKnown RBP41.37■■■■■ 4.21
TM6SF1-202ENST00000322019 CUL7Q14999 1698 aa41.33■■■■■ 4.21
TM6SF1-202ENST00000322019 AQRO60306 1485 aaKnown RBP eCLIP41.32■■■■■ 4.2
TM6SF1-202ENST00000322019 TTBK1Q5TCY1 1321 aaPredicted RBP41.29■■■■■ 4.2
TM6SF1-202ENST00000322019 VPS8Q8N3P4 1428 aa41.26■■■■■ 4.19
TM6SF1-202ENST00000322019 ZNF608Q9ULD9 1512 aaPredicted RBP41.25■■■■■ 4.19
TM6SF1-202ENST00000322019 IFT140Q96RY7 1462 aa41.24■■■■■ 4.19
TM6SF1-202ENST00000322019 ARAP1Q96P48 1450 aa41.23■■■■■ 4.19
TM6SF1-202ENST00000322019 PBRM1Q86U86 1689 aa41.16■■■■■ 4.18
TM6SF1-202ENST00000322019 ARHGAP35Q9NRY4 1499 aa41.16■■■■■ 4.18
TM6SF1-202ENST00000322019 GRIN2BQ13224 1484 aa41.03■■■■■ 4.16
TM6SF1-202ENST00000322019 EIF4G3O43432 1585 aaKnown RBP40.99■■■■■ 4.15
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms