RNA–Protein interactions for RNA: ENST00000610322.4

RCC1L-201, Transcript of RCC1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCC1L, Length 2,300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1L-201ENST00000610322 NISCHQ9Y2I1 1504 aa52.98■■■■■ 6.07
RCC1L-201ENST00000610322 CCDC180Q9P1Z9 1646 aa46.03■■■■■ 4.96
RCC1L-201ENST00000610322 ZCCHC6Q5VYS8 1495 aaKnown RBP44.5■■■■■ 4.71
RCC1L-201ENST00000610322 SHROOM4Q9ULL8 1493 aa44.42■■■■■ 4.7
RCC1L-201ENST00000610322 DCAF8L2P0C7V8 631 aa44.01■■■■■ 4.64
RCC1L-201ENST00000610322 SUPT5HO00267 1087 aaKnown RBP43.87■■■■■ 4.61
RCC1L-201ENST00000610322 ABCC9O60706 1549 aa43.8■■■■■ 4.6
RCC1L-201ENST00000610322 DCAF1Q9Y4B6 1507 aa43.66■■■■■ 4.58
RCC1L-201ENST00000610322 HRCP23327 699 aa43.19■■■■■ 4.5
RCC1L-201ENST00000610322 MYO15BQ96JP2 1530 aa43.17■■■■■ 4.5
RCC1L-201ENST00000610322 CHIC1Q5VXU3 224 aa43.14■■■■■ 4.5
RCC1L-201ENST00000610322 NACADO15069 1562 aa42.91■■■■■ 4.46
RCC1L-201ENST00000610322 SCRIBQ14160 1630 aa42.58■■■■■ 4.41
RCC1L-201ENST00000610322 RB1CC1Q8TDY2 1594 aa42.57■■■■■ 4.41
RCC1L-201ENST00000610322 PCGF6Q9BYE7 350 aa42.46■■■■■ 4.39
RCC1L-201ENST00000610322 PPARGC1BQ86YN6 1023 aaKnown RBP41.99■■■■■ 4.31
RCC1L-201ENST00000610322 UNC13AQ9UPW8 1703 aa41.79■■■■■ 4.28
RCC1L-201ENST00000610322 LOC105371045A0A1W2PR82 267 aa41.76■■■■■ 4.28
RCC1L-201ENST00000610322 TRIM26Q12899 539 aaPredicted RBP41.55■■■■■ 4.24
RCC1L-201ENST00000610322 PABPN1Q86U42 306 aaKnown RBP eCLIP41.41■■■■■ 4.22
RCC1L-201ENST00000610322 BICRAQ9NZM4 1560 aa41.39■■■■■ 4.22
RCC1L-201ENST00000610322 CECR2Q9BXF3 1484 aa41.31■■■■■ 4.2
RCC1L-201ENST00000610322 RSF1Q96T23 1441 aaPredicted RBP41.27■■■■■ 4.2
RCC1L-201ENST00000610322 ZEB1P37275 1124 aaPredicted RBP41.12■■■■■ 4.17
RCC1L-201ENST00000610322 MROH2BQ7Z745 1585 aa41.02■■■■■ 4.16
RCC1L-201ENST00000610322 TRIM41Q8WV44 630 aa40.9■■■■■ 4.14
RCC1L-201ENST00000610322 BAZ1AQ9NRL2 1556 aaPredicted RBP40.86■■■■■ 4.13
RCC1L-201ENST00000610322 PELP1Q8IZL8 1130 aaKnown RBP40.74■■■■■ 4.11
RCC1L-201ENST00000610322 SMARCA4P51532 1647 aa40.72■■■■■ 4.11
RCC1L-201ENST00000610322 WIZO95785 1651 aa40.69■■■■■ 4.1
RCC1L-201ENST00000610322 FAM9AQ8IZU1 332 aaPredicted RBP40.46■■■■■ 4.07
RCC1L-201ENST00000610322 SCAF1Q9H7N4 1312 aaKnown RBP40.29■■■■■ 4.04
RCC1L-201ENST00000610322 TOP2AP11388 1531 aaKnown RBP40.15■■■■■ 4.02
RCC1L-201ENST00000610322 PEG3Q9GZU2 1588 aa40.14■■■■■ 4.02
RCC1L-201ENST00000610322 EIF4G1Q04637 1599 aaKnown RBP40.12■■■■■ 4.01
RCC1L-201ENST00000610322 ATAD2BQ9ULI0 1458 aa40.07■■■■■ 4.01
RCC1L-201ENST00000610322 EHMT2Q96KQ7 1210 aa39.98■■■■□ 3.99
RCC1L-201ENST00000610322 SMARCA2P51531 1590 aa39.96■■■■□ 3.99
RCC1L-201ENST00000610322 CCDC88BA6NC98 1476 aa39.84■■■■□ 3.97
RCC1L-201ENST00000610322 BAZ1BQ9UIG0 1483 aaKnown RBP39.84■■■■□ 3.97
RCC1L-201ENST00000610322 NCAPD3P42695 1498 aa39.67■■■■□ 3.94
RCC1L-201ENST00000610322 ACIN1Q9UKV3 1341 aaKnown RBP39.67■■■■□ 3.94
RCC1L-201ENST00000610322 WRNQ14191 1432 aaPredicted RBP eCLIP39.64■■■■□ 3.94
RCC1L-201ENST00000610322 CCER1Q8TC90 406 aaPredicted RBP39.62■■■■□ 3.93
RCC1L-201ENST00000610322 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.6■■■■□ 3.93
RCC1L-201ENST00000610322 HMGXB3Q12766 1538 aa39.56■■■■□ 3.92
RCC1L-201ENST00000610322 CC2D2AQ9P2K1 1620 aa39.55■■■■□ 3.92
RCC1L-201ENST00000610322 NEUROD1Q13562 356 aa39.46■■■■□ 3.91
RCC1L-201ENST00000610322 ABCC8Q09428 1581 aa39.43■■■■□ 3.9
RCC1L-201ENST00000610322 CEP162Q5TB80 1403 aa39.37■■■■□ 3.89
RCC1L-201ENST00000610322 DIEXFQ68CQ4 756 aaKnown RBP39.36■■■■□ 3.89
RCC1L-201ENST00000610322 CENPBP07199 599 aaPredicted RBP39.35■■■■□ 3.89
RCC1L-201ENST00000610322 TNIKQ9UKE5 1360 aa39.31■■■■□ 3.88
RCC1L-201ENST00000610322 EEA1Q15075 1411 aa39.27■■■■□ 3.88
RCC1L-201ENST00000610322 SOGA1O94964 1423 aa39.18■■■■□ 3.86
RCC1L-201ENST00000610322 GTF3C3Q9Y5Q9 886 aa39.18■■■■□ 3.86
RCC1L-201ENST00000610322 CSRNP3Q8WYN3 585 aa39.03■■■■□ 3.84
RCC1L-201ENST00000610322 MYT1Q01538 1121 aa39.02■■■■□ 3.84
RCC1L-201ENST00000610322 GOLGA3Q08378 1498 aa38.97■■■■□ 3.83
RCC1L-201ENST00000610322 RUSC2Q8N2Y8 1516 aa38.94■■■■□ 3.82
RCC1L-201ENST00000610322 TTBK1Q5TCY1 1321 aaPredicted RBP38.91■■■■□ 3.82
RCC1L-201ENST00000610322 ZNF316A6NFI3 1004 aaPredicted RBP38.86■■■■□ 3.81
RCC1L-201ENST00000610322 UBTFP17480 764 aaKnown RBP38.83■■■■□ 3.81
RCC1L-201ENST00000610322 CFTRP13569 1480 aa38.82■■■■□ 3.81
RCC1L-201ENST00000610322 DNAJC5BQ9UF47 199 aa38.81■■■■□ 3.8
RCC1L-201ENST00000610322 KIF21BO75037 1637 aa38.71■■■■□ 3.79
RCC1L-201ENST00000610322 CADPSQ9ULU8 1353 aa38.7■■■■□ 3.79
RCC1L-201ENST00000610322 CEP164Q9UPV0 1460 aa38.69■■■■□ 3.78
RCC1L-201ENST00000610322 SYNJ1O43426 1573 aa38.61■■■■□ 3.77
RCC1L-201ENST00000610322 PRDM2Q13029 1718 aa38.5■■■■□ 3.75
RCC1L-201ENST00000610322 CLIP1P30622 1438 aa38.49■■■■□ 3.75
RCC1L-201ENST00000610322 NESP48681 1621 aa38.49■■■■□ 3.75
RCC1L-201ENST00000610322 VPS8Q8N3P4 1428 aa38.47■■■■□ 3.75
RCC1L-201ENST00000610322 YTHDC1Q96MU7 727 aaKnown RBP38.39■■■■□ 3.74
RCC1L-201ENST00000610322 TOP2BQ02880 1626 aa38.36■■■■□ 3.73
RCC1L-201ENST00000610322 MIER1Q8N108 512 aa38.35■■■■□ 3.73
RCC1L-201ENST00000610322 HNRNPUL2Q1KMD3 747 aaKnown RBP38.34■■■■□ 3.73
RCC1L-201ENST00000610322 CUX1P39880 1505 aa38.33■■■■□ 3.73
RCC1L-201ENST00000610322 FANCD2Q9BXW9 1451 aa38.3■■■■□ 3.72
RCC1L-201ENST00000610322 BIVM-ERCC5R4GMW8 1640 aa38.29■■■■□ 3.72
RCC1L-201ENST00000610322 LAMC3Q9Y6N6 1575 aa38.28■■■■□ 3.72
RCC1L-201ENST00000610322 RAPGEF2Q9Y4G8 1499 aa38.23■■■■□ 3.71
RCC1L-201ENST00000610322 APLP2Q06481 763 aa38.15■■■■□ 3.7
RCC1L-201ENST00000610322 CLSPNQ9HAW4 1339 aa38.07■■■■□ 3.68
RCC1L-201ENST00000610322 PDS5BQ9NTI5 1447 aa38.02■■■■□ 3.68
RCC1L-201ENST00000610322 ERICH3Q5RHP9 1530 aa37.98■■■■□ 3.67
RCC1L-201ENST00000610322 KIF21AQ7Z4S6 1674 aa37.92■■■■□ 3.66
RCC1L-201ENST00000610322 FGD5Q6ZNL6 1462 aa37.9■■■■□ 3.66
RCC1L-201ENST00000610322 DNMBPQ6XZF7 1577 aa37.89■■■■□ 3.66
RCC1L-201ENST00000610322 TOPBP1Q92547 1522 aa37.88■■■■□ 3.65
RCC1L-201ENST00000610322 DHX57Q6P158 1386 aaKnown RBP37.88■■■■□ 3.65
RCC1L-201ENST00000610322 PRXQ9BXM0 1461 aa37.87■■■■□ 3.65
RCC1L-201ENST00000610322 URB2Q14146 1524 aaKnown RBP37.85■■■■□ 3.65
RCC1L-201ENST00000610322 ARAP1Q96P48 1450 aa37.84■■■■□ 3.65
RCC1L-201ENST00000610322 POLA1P09884 1462 aaPredicted RBP37.72■■■■□ 3.63
RCC1L-201ENST00000610322 RANGAP1P46060 587 aaPredicted RBP37.71■■■■□ 3.63
RCC1L-201ENST00000610322 KIF27Q86VH2 1401 aa37.71■■■■□ 3.63
RCC1L-201ENST00000610322 RRBP1Q9P2E9 1410 aaKnown RBP37.71■■■■□ 3.63
RCC1L-201ENST00000610322 CUX2O14529 1486 aa37.68■■■■□ 3.62
RCC1L-201ENST00000610322 RAD54L2Q9Y4B4 1467 aa37.67■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms