RNA–Protein interactions for RNA: ENST00000338660.5

VWA1-201, Transcript of von Willebrand factor A domain containing 1, humanhuman

TSL 2 BASIC

Gene VWA1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA1-201ENST00000338660 NISCHQ9Y2I1 1504 aa55.87■■■■■ 6.53
VWA1-201ENST00000338660 CCDC180Q9P1Z9 1646 aa47.92■■■■■ 5.26
VWA1-201ENST00000338660 ZCCHC6Q5VYS8 1495 aaKnown RBP47.17■■■■■ 5.14
VWA1-201ENST00000338660 SHROOM4Q9ULL8 1493 aa46.78■■■■■ 5.08
VWA1-201ENST00000338660 DCAF1Q9Y4B6 1507 aa46.05■■■■■ 4.96
VWA1-201ENST00000338660 DCAF8L2P0C7V8 631 aa46.02■■■■■ 4.96
VWA1-201ENST00000338660 SUPT5HO00267 1087 aaKnown RBP45.65■■■■■ 4.9
VWA1-201ENST00000338660 MYO15BQ96JP2 1530 aa44.98■■■■■ 4.79
VWA1-201ENST00000338660 SCRIBQ14160 1630 aa44.51■■■■■ 4.72
VWA1-201ENST00000338660 ABCC9O60706 1549 aa44.49■■■■■ 4.71
VWA1-201ENST00000338660 NACADO15069 1562 aa44.39■■■■■ 4.7
VWA1-201ENST00000338660 CHIC1Q5VXU3 224 aa44.32■■■■■ 4.68
VWA1-201ENST00000338660 RSF1Q96T23 1441 aaPredicted RBP43.93■■■■■ 4.62
VWA1-201ENST00000338660 RB1CC1Q8TDY2 1594 aa43.72■■■■■ 4.59
VWA1-201ENST00000338660 CECR2Q9BXF3 1484 aa43.47■■■■■ 4.55
VWA1-201ENST00000338660 MROH2BQ7Z745 1585 aa43.31■■■■■ 4.52
VWA1-201ENST00000338660 WIZO95785 1651 aa43.03■■■■■ 4.48
VWA1-201ENST00000338660 UNC13AQ9UPW8 1703 aa43.02■■■■■ 4.48
VWA1-201ENST00000338660 BAZ1AQ9NRL2 1556 aaPredicted RBP42.98■■■■■ 4.47
VWA1-201ENST00000338660 LOC105371045A0A1W2PR82 267 aa42.8■■■■■ 4.44
VWA1-201ENST00000338660 TRIM41Q8WV44 630 aa42.71■■■■■ 4.43
VWA1-201ENST00000338660 SMARCA4P51532 1647 aa42.66■■■■■ 4.42
VWA1-201ENST00000338660 BICRAQ9NZM4 1560 aa42.52■■■■■ 4.4
VWA1-201ENST00000338660 TOP2AP11388 1531 aaKnown RBP42.47■■■■■ 4.39
VWA1-201ENST00000338660 EIF4G1Q04637 1599 aaKnown RBP42.35■■■■■ 4.37
VWA1-201ENST00000338660 PABPN1Q86U42 306 aaKnown RBP eCLIP42.33■■■■■ 4.37
VWA1-201ENST00000338660 CCDC88BA6NC98 1476 aa42.2■■■■■ 4.35
VWA1-201ENST00000338660 SMARCA2P51531 1590 aa42.18■■■■■ 4.34
VWA1-201ENST00000338660 PCGF6Q9BYE7 350 aa42.18■■■■■ 4.34
VWA1-201ENST00000338660 FAM9AQ8IZU1 332 aaPredicted RBP42.13■■■■■ 4.33
VWA1-201ENST00000338660 PEG3Q9GZU2 1588 aa42.01■■■■■ 4.32
VWA1-201ENST00000338660 HRCP23327 699 aa41.95■■■■■ 4.31
VWA1-201ENST00000338660 ABCC8Q09428 1581 aa41.79■■■■■ 4.28
VWA1-201ENST00000338660 TRIM26Q12899 539 aaPredicted RBP41.71■■■■■ 4.27
VWA1-201ENST00000338660 ATAD2BQ9ULI0 1458 aa41.68■■■■■ 4.26
VWA1-201ENST00000338660 EHMT2Q96KQ7 1210 aa41.59■■■■■ 4.25
VWA1-201ENST00000338660 BAZ1BQ9UIG0 1483 aaKnown RBP41.5■■■■■ 4.23
VWA1-201ENST00000338660 SOGA1O94964 1423 aa41.3■■■■■ 4.2
VWA1-201ENST00000338660 WRNQ14191 1432 aaPredicted RBP eCLIP41.27■■■■■ 4.2
VWA1-201ENST00000338660 EEA1Q15075 1411 aa41.23■■■■■ 4.19
VWA1-201ENST00000338660 RUSC2Q8N2Y8 1516 aa41.1■■■■■ 4.17
VWA1-201ENST00000338660 SYNJ1O43426 1573 aa41.08■■■■■ 4.17
VWA1-201ENST00000338660 CSRNP3Q8WYN3 585 aa41.08■■■■■ 4.17
VWA1-201ENST00000338660 NCAPD3P42695 1498 aa41.05■■■■■ 4.16
VWA1-201ENST00000338660 HMGXB3Q12766 1538 aa41.03■■■■■ 4.16
VWA1-201ENST00000338660 TNIKQ9UKE5 1360 aa40.97■■■■■ 4.15
VWA1-201ENST00000338660 PPARGC1BQ86YN6 1023 aaKnown RBP40.94■■■■■ 4.14
VWA1-201ENST00000338660 CEP162Q5TB80 1403 aa40.89■■■■■ 4.14
VWA1-201ENST00000338660 GOLGA3Q08378 1498 aa40.81■■■■■ 4.12
VWA1-201ENST00000338660 TOP2BQ02880 1626 aa40.72■■■■■ 4.11
VWA1-201ENST00000338660 UBTFP17480 764 aaKnown RBP40.72■■■■■ 4.11
VWA1-201ENST00000338660 KIF21BO75037 1637 aa40.67■■■■■ 4.1
VWA1-201ENST00000338660 CEP164Q9UPV0 1460 aa40.66■■■■■ 4.1
VWA1-201ENST00000338660 BIVM-ERCC5R4GMW8 1640 aa40.62■■■■■ 4.09
VWA1-201ENST00000338660 ZEB1P37275 1124 aaPredicted RBP40.61■■■■■ 4.09
VWA1-201ENST00000338660 CFTRP13569 1480 aa40.53■■■■■ 4.08
VWA1-201ENST00000338660 CUX1P39880 1505 aa40.38■■■■■ 4.06
VWA1-201ENST00000338660 RAPGEF2Q9Y4G8 1499 aa40.36■■■■■ 4.05
VWA1-201ENST00000338660 CLIP1P30622 1438 aa40.26■■■■■ 4.04
VWA1-201ENST00000338660 PRDM2Q13029 1718 aa40.26■■■■■ 4.04
VWA1-201ENST00000338660 CC2D2AQ9P2K1 1620 aa40.2■■■■■ 4.03
VWA1-201ENST00000338660 PRXQ9BXM0 1461 aa40.16■■■■■ 4.02
VWA1-201ENST00000338660 CADPSQ9ULU8 1353 aa40.14■■■■■ 4.02
VWA1-201ENST00000338660 ERICH3Q5RHP9 1530 aa40.14■■■■■ 4.02
VWA1-201ENST00000338660 TTBK1Q5TCY1 1321 aaPredicted RBP40.14■■■■■ 4.02
VWA1-201ENST00000338660 KIF27Q86VH2 1401 aa40.08■■■■■ 4.01
VWA1-201ENST00000338660 VPS8Q8N3P4 1428 aa40.06■■■■■ 4
VWA1-201ENST00000338660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.99■■■■□ 3.99
VWA1-201ENST00000338660 CCER1Q8TC90 406 aaPredicted RBP39.89■■■■□ 3.98
VWA1-201ENST00000338660 RANGAP1P46060 587 aaPredicted RBP39.82■■■■□ 3.97
VWA1-201ENST00000338660 CUX2O14529 1486 aa39.73■■■■□ 3.95
VWA1-201ENST00000338660 FGD5Q6ZNL6 1462 aa39.73■■■■□ 3.95
VWA1-201ENST00000338660 APLP2Q06481 763 aa39.73■■■■□ 3.95
VWA1-201ENST00000338660 ARAP1Q96P48 1450 aa39.71■■■■□ 3.95
VWA1-201ENST00000338660 FANCD2Q9BXW9 1451 aa39.71■■■■□ 3.95
VWA1-201ENST00000338660 IGF1RP08069 1367 aa39.67■■■■□ 3.94
VWA1-201ENST00000338660 DNMBPQ6XZF7 1577 aa39.51■■■■□ 3.92
VWA1-201ENST00000338660 NESP48681 1621 aa39.5■■■■□ 3.91
VWA1-201ENST00000338660 CARMIL1Q5VZK9 1371 aa39.47■■■■□ 3.91
VWA1-201ENST00000338660 ARHGAP35Q9NRY4 1499 aa39.47■■■■□ 3.91
VWA1-201ENST00000338660 TOPBP1Q92547 1522 aa39.42■■■■□ 3.9
VWA1-201ENST00000338660 HNRNPUL2Q1KMD3 747 aaKnown RBP39.4■■■■□ 3.9
VWA1-201ENST00000338660 LAMC3Q9Y6N6 1575 aa39.38■■■■□ 3.89
VWA1-201ENST00000338660 POLA1P09884 1462 aaPredicted RBP39.35■■■■□ 3.89
VWA1-201ENST00000338660 ABCA10Q8WWZ4 1543 aa39.35■■■■□ 3.89
VWA1-201ENST00000338660 RAD54L2Q9Y4B4 1467 aa39.32■■■■□ 3.88
VWA1-201ENST00000338660 KANK4Q5T7N3 995 aaPredicted RBP39.3■■■■□ 3.88
VWA1-201ENST00000338660 URB2Q14146 1524 aaKnown RBP39.17■■■■□ 3.86
VWA1-201ENST00000338660 DNAJC5BQ9UF47 199 aa39.1■■■■□ 3.85
VWA1-201ENST00000338660 RRBP1Q9P2E9 1410 aaKnown RBP39.09■■■■□ 3.85
VWA1-201ENST00000338660 PDS5BQ9NTI5 1447 aa39.09■■■■□ 3.85
VWA1-201ENST00000338660 CUL7Q14999 1698 aa39.07■■■■□ 3.85
VWA1-201ENST00000338660 WDR97A6NE52 1622 aa39.06■■■■□ 3.84
VWA1-201ENST00000338660 MAP3K1Q13233 1512 aa39.05■■■■□ 3.84
VWA1-201ENST00000338660 TIAM1Q13009 1591 aa38.97■■■■□ 3.83
VWA1-201ENST00000338660 FHAD1B1AJZ9 1412 aa38.93■■■■□ 3.82
VWA1-201ENST00000338660 KIF21AQ7Z4S6 1674 aa38.91■■■■□ 3.82
VWA1-201ENST00000338660 ABCA5Q8WWZ7 1642 aa38.9■■■■□ 3.82
VWA1-201ENST00000338660 CCNB3Q8WWL7 1395 aa38.88■■■■□ 3.82
VWA1-201ENST00000338660 CTTNBP2Q8WZ74 1663 aa38.86■■■■□ 3.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms