RNA–Protein interactions for RNA: ENST00000395067.6

MSANTD3-203, Transcript of Myb/SANT DNA binding domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSANTD3, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-203ENST00000395067 NISCHQ9Y2I1 1504 aa70.77■■■■■ 8.92
MSANTD3-203ENST00000395067 CCDC180Q9P1Z9 1646 aa63.31■■■■■ 7.73
MSANTD3-203ENST00000395067 ABCC9O60706 1549 aa62.63■■■■■ 7.62
MSANTD3-203ENST00000395067 RB1CC1Q8TDY2 1594 aa59.87■■■■■ 7.18
MSANTD3-203ENST00000395067 NACADO15069 1562 aa59.59■■■■■ 7.13
MSANTD3-203ENST00000395067 DCAF8L2P0C7V8 631 aa59.3■■■■■ 7.08
MSANTD3-203ENST00000395067 MYO15BQ96JP2 1530 aa58.96■■■■■ 7.03
MSANTD3-203ENST00000395067 ZCCHC6Q5VYS8 1495 aaKnown RBP58.83■■■■■ 7.01
MSANTD3-203ENST00000395067 UNC13AQ9UPW8 1703 aa58.79■■■■■ 7
MSANTD3-203ENST00000395067 DCAF1Q9Y4B6 1507 aa58.46■■■■■ 6.95
MSANTD3-203ENST00000395067 PABPN1Q86U42 306 aaKnown RBP eCLIP58.33■■■■■ 6.93
MSANTD3-203ENST00000395067 BICRAQ9NZM4 1560 aa58.22■■■■■ 6.91
MSANTD3-203ENST00000395067 DNAJC5BQ9UF47 199 aa58.16■■■■■ 6.9
MSANTD3-203ENST00000395067 SCRIBQ14160 1630 aa57.75■■■■■ 6.83
MSANTD3-203ENST00000395067 SHROOM4Q9ULL8 1493 aa57.33■■■■■ 6.77
MSANTD3-203ENST00000395067 EIF4G1Q04637 1599 aaKnown RBP56.68■■■■■ 6.66
MSANTD3-203ENST00000395067 CC2D2AQ9P2K1 1620 aa56.66■■■■■ 6.66
MSANTD3-203ENST00000395067 CECR2Q9BXF3 1484 aa56.31■■■■■ 6.6
MSANTD3-203ENST00000395067 SMARCA4P51532 1647 aa55.14■■■■■ 6.42
MSANTD3-203ENST00000395067 NCAPD3P42695 1498 aa54.98■■■■■ 6.39
MSANTD3-203ENST00000395067 ATAD2BQ9ULI0 1458 aa54.95■■■■■ 6.39
MSANTD3-203ENST00000395067 BAZ1AQ9NRL2 1556 aaPredicted RBP54.88■■■■■ 6.38
MSANTD3-203ENST00000395067 SMARCA2P51531 1590 aa54.82■■■■■ 6.37
MSANTD3-203ENST00000395067 HMGXB3Q12766 1538 aa54.7■■■■■ 6.35
MSANTD3-203ENST00000395067 MROH2BQ7Z745 1585 aa54.59■■■■■ 6.33
MSANTD3-203ENST00000395067 PEG3Q9GZU2 1588 aa54.56■■■■■ 6.33
MSANTD3-203ENST00000395067 BAZ1BQ9UIG0 1483 aaKnown RBP54.44■■■■■ 6.31
MSANTD3-203ENST00000395067 NESP48681 1621 aa54.04■■■■■ 6.24
MSANTD3-203ENST00000395067 WIZO95785 1651 aa54.03■■■■■ 6.24
MSANTD3-203ENST00000395067 ERCC6Q03468 1493 aa53.95■■■■■ 6.23
MSANTD3-203ENST00000395067 LAMC3Q9Y6N6 1575 aa53.71■■■■■ 6.19
MSANTD3-203ENST00000395067 CUX2O14529 1486 aa53.65■■■■■ 6.18
MSANTD3-203ENST00000395067 RSF1Q96T23 1441 aaPredicted RBP53.61■■■■■ 6.17
MSANTD3-203ENST00000395067 KIF21AQ7Z4S6 1674 aa53.47■■■■■ 6.15
MSANTD3-203ENST00000395067 THOC2Q8NI27 1593 aaKnown RBP53.42■■■■■ 6.14
MSANTD3-203ENST00000395067 TOP2AP11388 1531 aaKnown RBP53.31■■■■■ 6.13
MSANTD3-203ENST00000395067 CADPSQ9ULU8 1353 aa53.31■■■■■ 6.12
MSANTD3-203ENST00000395067 PDS5BQ9NTI5 1447 aa53.25■■■■■ 6.11
MSANTD3-203ENST00000395067 CFTRP13569 1480 aa52.89■■■■■ 6.06
MSANTD3-203ENST00000395067 MRC2Q9UBG0 1479 aa52.85■■■■■ 6.05
MSANTD3-203ENST00000395067 DNAJC5Q9H3Z4 198 aa52.82■■■■■ 6.05
MSANTD3-203ENST00000395067 FANCD2Q9BXW9 1451 aa52.77■■■■■ 6.04
MSANTD3-203ENST00000395067 CEP164Q9UPV0 1460 aa52.77■■■■■ 6.04
MSANTD3-203ENST00000395067 WDR62O43379 1518 aa52.75■■■■■ 6.03
MSANTD3-203ENST00000395067 CCDC88BA6NC98 1476 aa52.66■■■■■ 6.02
MSANTD3-203ENST00000395067 PRDM2Q13029 1718 aa52.64■■■■■ 6.02
MSANTD3-203ENST00000395067 URB2Q14146 1524 aaKnown RBP52.35■■■■■ 5.97
MSANTD3-203ENST00000395067 TOPBP1Q92547 1522 aa51.88■■■■■ 5.9
MSANTD3-203ENST00000395067 DNMBPQ6XZF7 1577 aa51.76■■■■■ 5.88
MSANTD3-203ENST00000395067 ABCC8Q09428 1581 aa51.68■■■■■ 5.86
MSANTD3-203ENST00000395067 IFT140Q96RY7 1462 aa51.65■■■■■ 5.86
MSANTD3-203ENST00000395067 SUPT5HO00267 1087 aaKnown RBP51.65■■■■■ 5.86
MSANTD3-203ENST00000395067 ZNF608Q9ULD9 1512 aaPredicted RBP51.6■■■■■ 5.85
MSANTD3-203ENST00000395067 TARBP1Q13395 1621 aaKnown RBP51.44■■■■■ 5.82
MSANTD3-203ENST00000395067 EIF4G3O43432 1585 aaKnown RBP51.42■■■■■ 5.82
MSANTD3-203ENST00000395067 POLA1P09884 1462 aaPredicted RBP51.39■■■■■ 5.82
MSANTD3-203ENST00000395067 CUX1P39880 1505 aa51.25■■■■■ 5.8
MSANTD3-203ENST00000395067 RAD54L2Q9Y4B4 1467 aa51.19■■■■■ 5.79
MSANTD3-203ENST00000395067 OSCARQ8IYS5 282 aa51.19■■■■■ 5.78
MSANTD3-203ENST00000395067 AQRO60306 1485 aaKnown RBP eCLIP51.16■■■■■ 5.782e-6■■■□□ 18.3
MSANTD3-203ENST00000395067 FGD5Q6ZNL6 1462 aa51.16■■■■■ 5.78
MSANTD3-203ENST00000395067 SOGA1O94964 1423 aa51.07■■■■■ 5.77
MSANTD3-203ENST00000395067 CHD1O14646 1710 aa50.98■■■■■ 5.75
MSANTD3-203ENST00000395067 TDRD9Q8NDG6 1382 aaKnown RBP50.92■■■■■ 5.74
MSANTD3-203ENST00000395067 WDR97A6NE52 1622 aa50.91■■■■■ 5.74
MSANTD3-203ENST00000395067 TRIM41Q8WV44 630 aa50.81■■■■■ 5.73
MSANTD3-203ENST00000395067 RIMBP3CA6NJZ7 1639 aa50.7■■■■■ 5.71
MSANTD3-203ENST00000395067 RIMBP3BA6NNM3 1639 aa50.7■■■■■ 5.71
MSANTD3-203ENST00000395067 RIMBP3Q9UFD9 1639 aa50.7■■■■■ 5.71
MSANTD3-203ENST00000395067 SNAPC4Q5SXM2 1469 aa50.7■■■■■ 5.71
MSANTD3-203ENST00000395067 BIVM-ERCC5R4GMW8 1640 aa50.65■■■■■ 5.7
MSANTD3-203ENST00000395067 PBRM1Q86U86 1689 aa50.64■■■■■ 5.7
MSANTD3-203ENST00000395067 SYNJ1O43426 1573 aa50.61■■■■■ 5.69
MSANTD3-203ENST00000395067 TOP2BQ02880 1626 aa50.59■■■■■ 5.69
MSANTD3-203ENST00000395067 FBLN2P98095 1184 aa50.59■■■■■ 5.69
MSANTD3-203ENST00000395067 ABCA10Q8WWZ4 1543 aa50.59■■■■■ 5.69
MSANTD3-203ENST00000395067 GRIN2BQ13224 1484 aa50.58■■■■■ 5.69
MSANTD3-203ENST00000395067 ABCA5Q8WWZ7 1642 aa50.56■■■■■ 5.68
MSANTD3-203ENST00000395067 ARHGEF11O15085 1522 aa50.55■■■■■ 5.68
MSANTD3-203ENST00000395067 WRNQ14191 1432 aaPredicted RBP eCLIP50.54■■■■■ 5.68
MSANTD3-203ENST00000395067 MAGI1Q96QZ7 1491 aaPredicted RBP50.54■■■■■ 5.68
MSANTD3-203ENST00000395067 GAPVD1Q14C86 1478 aa50.51■■■■■ 5.68
MSANTD3-203ENST00000395067 SYNJ2O15056 1496 aa50.36■■■■■ 5.65
MSANTD3-203ENST00000395067 CLASP1Q7Z460 1538 aa50.31■■■■■ 5.64
MSANTD3-203ENST00000395067 CHMP7Q8WUX9 453 aaPredicted RBP50.3■■■■■ 5.64
MSANTD3-203ENST00000395067 ADAMTS12P58397 1594 aa50.12■■■■■ 5.61
MSANTD3-203ENST00000395067 ARAP1Q96P48 1450 aa50.11■■■■■ 5.61
MSANTD3-203ENST00000395067 CYB5RLQ6IPT4 315 aa50.01■■■■■ 5.6
MSANTD3-203ENST00000395067 GRIN2AQ12879 1464 aa49.98■■■■■ 5.59
MSANTD3-203ENST00000395067 ERICH3Q5RHP9 1530 aa49.96■■■■■ 5.59
MSANTD3-203ENST00000395067 FHAD1B1AJZ9 1412 aa49.86■■■■■ 5.57
MSANTD3-203ENST00000395067 CEP170Q5SW79 1584 aa49.86■■■■■ 5.57
MSANTD3-203ENST00000395067 NUP160Q12769 1436 aa49.78■■■■■ 5.56
MSANTD3-203ENST00000395067 ERCC6L2Q5T890 1561 aa49.63■■■■■ 5.53
MSANTD3-203ENST00000395067 SHROOM2Q13796 1616 aa49.58■■■■■ 5.53
MSANTD3-203ENST00000395067 KIF27Q86VH2 1401 aa49.5■■■■■ 5.51
MSANTD3-203ENST00000395067 CUL7Q14999 1698 aa49.42■■■■■ 5.5
MSANTD3-203ENST00000395067 RUSC2Q8N2Y8 1516 aa49.42■■■■■ 5.5
MSANTD3-203ENST00000395067 IGF1RP08069 1367 aa49.41■■■■■ 5.5
MSANTD3-203ENST00000395067 TRHP20396 242 aaPredicted RBP49.21■■■■■ 5.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms