RNA–Protein interactions for RNA: ENST00000506339.5

HNRNPAB-206, Transcript of heterogeneous nuclear ribonucleoprotein A/B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HNRNPAB, Length 1,747 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPAB-206ENST00000506339 NISCHQ9Y2I1 1504 aa62.62■■■■■ 7.61
HNRNPAB-206ENST00000506339 CCDC180Q9P1Z9 1646 aa54.95■■■■■ 6.39
HNRNPAB-206ENST00000506339 ZCCHC6Q5VYS8 1495 aaKnown RBP52.46■■■■■ 5.99
HNRNPAB-206ENST00000506339 ABCC9O60706 1549 aa52.4■■■■■ 5.98
HNRNPAB-206ENST00000506339 DCAF1Q9Y4B6 1507 aa51.88■■■■■ 5.9
HNRNPAB-206ENST00000506339 DCAF8L2P0C7V8 631 aa51.72■■■■■ 5.87
HNRNPAB-206ENST00000506339 MYO15BQ96JP2 1530 aa51.57■■■■■ 5.85
HNRNPAB-206ENST00000506339 NACADO15069 1562 aa51.36■■■■■ 5.81
HNRNPAB-206ENST00000506339 RB1CC1Q8TDY2 1594 aa51.03■■■■■ 5.76
HNRNPAB-206ENST00000506339 SHROOM4Q9ULL8 1493 aa50.35■■■■■ 5.65
HNRNPAB-206ENST00000506339 SCRIBQ14160 1630 aa50.26■■■■■ 5.64
HNRNPAB-206ENST00000506339 UNC13AQ9UPW8 1703 aa49.9■■■■■ 5.58
HNRNPAB-206ENST00000506339 BICRAQ9NZM4 1560 aa49.48■■■■■ 5.51
HNRNPAB-206ENST00000506339 PABPN1Q86U42 306 aaKnown RBP eCLIP49.26■■■■■ 5.48
HNRNPAB-206ENST00000506339 CECR2Q9BXF3 1484 aa48.63■■■■■ 5.37
HNRNPAB-206ENST00000506339 BAZ1AQ9NRL2 1556 aaPredicted RBP48.41■■■■■ 5.34
HNRNPAB-206ENST00000506339 RSF1Q96T23 1441 aaPredicted RBP48.29■■■■■ 5.32
HNRNPAB-206ENST00000506339 MROH2BQ7Z745 1585 aa48.29■■■■■ 5.32
HNRNPAB-206ENST00000506339 SMARCA4P51532 1647 aa48.24■■■■■ 5.31
HNRNPAB-206ENST00000506339 SUPT5HO00267 1087 aaKnown RBP48.16■■■■■ 5.3
HNRNPAB-206ENST00000506339 EIF4G1Q04637 1599 aaKnown RBP48.04■■■■■ 5.28
HNRNPAB-206ENST00000506339 WIZO95785 1651 aa47.83■■■■■ 5.25
HNRNPAB-206ENST00000506339 PEG3Q9GZU2 1588 aa47.78■■■■■ 5.24
HNRNPAB-206ENST00000506339 ATAD2BQ9ULI0 1458 aa47.65■■■■■ 5.22
HNRNPAB-206ENST00000506339 SMARCA2P51531 1590 aa47.62■■■■■ 5.21
HNRNPAB-206ENST00000506339 CC2D2AQ9P2K1 1620 aa47.47■■■■■ 5.19
HNRNPAB-206ENST00000506339 NCAPD3P42695 1498 aa47.42■■■■■ 5.18
HNRNPAB-206ENST00000506339 TOP2AP11388 1531 aaKnown RBP47.39■■■■■ 5.18
HNRNPAB-206ENST00000506339 BAZ1BQ9UIG0 1483 aaKnown RBP47.3■■■■■ 5.16
HNRNPAB-206ENST00000506339 HMGXB3Q12766 1538 aa47.27■■■■■ 5.16
HNRNPAB-206ENST00000506339 DNAJC5BQ9UF47 199 aa47■■■■■ 5.11
HNRNPAB-206ENST00000506339 CCDC88BA6NC98 1476 aa46.87■■■■■ 5.09
HNRNPAB-206ENST00000506339 CFTRP13569 1480 aa46.15■■■■■ 4.98
HNRNPAB-206ENST00000506339 CADPSQ9ULU8 1353 aa46.11■■■■■ 4.97
HNRNPAB-206ENST00000506339 LAMC3Q9Y6N6 1575 aa45.88■■■■■ 4.94
HNRNPAB-206ENST00000506339 CHIC1Q5VXU3 224 aa45.86■■■■■ 4.93
HNRNPAB-206ENST00000506339 PRDM2Q13029 1718 aa45.82■■■■■ 4.93
HNRNPAB-206ENST00000506339 NESP48681 1621 aa45.8■■■■■ 4.92
HNRNPAB-206ENST00000506339 ABCC8Q09428 1581 aa45.58■■■■■ 4.89
HNRNPAB-206ENST00000506339 FANCD2Q9BXW9 1451 aa45.55■■■■■ 4.88
HNRNPAB-206ENST00000506339 PDS5BQ9NTI5 1447 aa45.54■■■■■ 4.88
HNRNPAB-206ENST00000506339 WRNQ14191 1432 aaPredicted RBP eCLIP45.47■■■■■ 4.87
HNRNPAB-206ENST00000506339 TRIM41Q8WV44 630 aa45.43■■■■■ 4.86
HNRNPAB-206ENST00000506339 CEP164Q9UPV0 1460 aa45.33■■■■■ 4.85
HNRNPAB-206ENST00000506339 KIF21AQ7Z4S6 1674 aa45.26■■■■■ 4.84
HNRNPAB-206ENST00000506339 SYNJ1O43426 1573 aa45.25■■■■■ 4.83
HNRNPAB-206ENST00000506339 CUX1P39880 1505 aa45.2■■■■■ 4.83
HNRNPAB-206ENST00000506339 TOP2BQ02880 1626 aa45.19■■■■■ 4.83
HNRNPAB-206ENST00000506339 BIVM-ERCC5R4GMW8 1640 aa45.16■■■■■ 4.82
HNRNPAB-206ENST00000506339 DNMBPQ6XZF7 1577 aa45.04■■■■■ 4.8
HNRNPAB-206ENST00000506339 ERCC6Q03468 1493 aa45.02■■■■■ 4.8
HNRNPAB-206ENST00000506339 URB2Q14146 1524 aaKnown RBP45.01■■■■■ 4.8
HNRNPAB-206ENST00000506339 TOPBP1Q92547 1522 aa44.99■■■■■ 4.79
HNRNPAB-206ENST00000506339 MRC2Q9UBG0 1479 aa44.95■■■■■ 4.79
HNRNPAB-206ENST00000506339 FGD5Q6ZNL6 1462 aa44.8■■■■■ 4.76
HNRNPAB-206ENST00000506339 WDR62O43379 1518 aa44.77■■■■■ 4.76
HNRNPAB-206ENST00000506339 THOC2Q8NI27 1593 aaKnown RBP44.75■■■■■ 4.75
HNRNPAB-206ENST00000506339 POLA1P09884 1462 aaPredicted RBP44.71■■■■■ 4.75
HNRNPAB-206ENST00000506339 SOGA1O94964 1423 aa44.62■■■■■ 4.73
HNRNPAB-206ENST00000506339 EEA1Q15075 1411 aa44.53■■■■■ 4.72
HNRNPAB-206ENST00000506339 RAD54L2Q9Y4B4 1467 aa44.51■■■■■ 4.72
HNRNPAB-206ENST00000506339 RUSC2Q8N2Y8 1516 aa44.47■■■■■ 4.71
HNRNPAB-206ENST00000506339 ABCA10Q8WWZ4 1543 aa44.46■■■■■ 4.71
HNRNPAB-206ENST00000506339 CUX2O14529 1486 aa44.45■■■■■ 4.71
HNRNPAB-206ENST00000506339 FAM9AQ8IZU1 332 aaPredicted RBP44.43■■■■■ 4.7
HNRNPAB-206ENST00000506339 KIF27Q86VH2 1401 aa44.39■■■■■ 4.7
HNRNPAB-206ENST00000506339 TARBP1Q13395 1621 aaKnown RBP44.38■■■■■ 4.7
HNRNPAB-206ENST00000506339 WDR97A6NE52 1622 aa44.34■■■■■ 4.69
HNRNPAB-206ENST00000506339 IFT140Q96RY7 1462 aa44.33■■■■■ 4.69
HNRNPAB-206ENST00000506339 CSRNP3Q8WYN3 585 aa44.29■■■■■ 4.68
HNRNPAB-206ENST00000506339 TDRD9Q8NDG6 1382 aaKnown RBP44.14■■■■■ 4.66
HNRNPAB-206ENST00000506339 ABCA5Q8WWZ7 1642 aa44.13■■■■■ 4.65
HNRNPAB-206ENST00000506339 IGF1RP08069 1367 aa44.08■■■■■ 4.65
HNRNPAB-206ENST00000506339 GAPVD1Q14C86 1478 aa44.07■■■■■ 4.64
HNRNPAB-206ENST00000506339 ZNF608Q9ULD9 1512 aaPredicted RBP44.02■■■■■ 4.64
HNRNPAB-206ENST00000506339 LOC105371045A0A1W2PR82 267 aa43.99■■■■■ 4.63
HNRNPAB-206ENST00000506339 AQRO60306 1485 aaKnown RBP eCLIP43.98■■■■■ 4.639e-7■■■■■ 28
HNRNPAB-206ENST00000506339 PRXQ9BXM0 1461 aa43.95■■■■■ 4.63
HNRNPAB-206ENST00000506339 ERICH3Q5RHP9 1530 aa43.95■■■■■ 4.63
HNRNPAB-206ENST00000506339 KIF21BO75037 1637 aa43.93■■■■■ 4.62
HNRNPAB-206ENST00000506339 EIF4G3O43432 1585 aaKnown RBP43.88■■■■■ 4.61
HNRNPAB-206ENST00000506339 GRIN2BQ13224 1484 aa43.84■■■■■ 4.61
HNRNPAB-206ENST00000506339 CARMIL1Q5VZK9 1371 aa43.83■■■■■ 4.61
HNRNPAB-206ENST00000506339 PBRM1Q86U86 1689 aa43.82■■■■■ 4.61
HNRNPAB-206ENST00000506339 GOLGA3Q08378 1498 aa43.8■■■■■ 4.6
HNRNPAB-206ENST00000506339 CUL7Q14999 1698 aa43.79■■■■■ 4.6
HNRNPAB-206ENST00000506339 RAPGEF2Q9Y4G8 1499 aa43.75■■■■■ 4.59
HNRNPAB-206ENST00000506339 EHMT2Q96KQ7 1210 aa43.71■■■■■ 4.59
HNRNPAB-206ENST00000506339 FHAD1B1AJZ9 1412 aa43.61■■■■■ 4.57
HNRNPAB-206ENST00000506339 ADAMTS12P58397 1594 aa43.58■■■■■ 4.57
HNRNPAB-206ENST00000506339 TNIKQ9UKE5 1360 aa43.58■■■■■ 4.57
HNRNPAB-206ENST00000506339 MAGI1Q96QZ7 1491 aaPredicted RBP43.57■■■■■ 4.57
HNRNPAB-206ENST00000506339 UBTFP17480 764 aaKnown RBP43.57■■■■■ 4.57
HNRNPAB-206ENST00000506339 SNAPC4Q5SXM2 1469 aa43.57■■■■■ 4.56
HNRNPAB-206ENST00000506339 SYNJ2O15056 1496 aa43.39■■■■■ 4.54
HNRNPAB-206ENST00000506339 GRIN2AQ12879 1464 aa43.29■■■■■ 4.52
HNRNPAB-206ENST00000506339 CHMP7Q8WUX9 453 aaPredicted RBP43.27■■■■■ 4.52
HNRNPAB-206ENST00000506339 CEP162Q5TB80 1403 aa43.22■■■■■ 4.51
HNRNPAB-206ENST00000506339 CTTNBP2Q8WZ74 1663 aa43.16■■■■■ 4.5
HNRNPAB-206ENST00000506339 FBLN2P98095 1184 aa43.14■■■■■ 4.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms