RNA–Protein interactions for RNA: ENST00000409979.6

AGFG1-205, Transcript of ArfGAP with FG repeats 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene AGFG1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGFG1-205ENST00000409979 NISCHQ9Y2I1 1504 aa57.09■■■■■ 6.73
AGFG1-205ENST00000409979 CCDC180Q9P1Z9 1646 aa49.47■■■■■ 5.51
AGFG1-205ENST00000409979 ZCCHC6Q5VYS8 1495 aaKnown RBP48.15■■■■■ 5.3
AGFG1-205ENST00000409979 DCAF8L2P0C7V8 631 aa47.26■■■■■ 5.16
AGFG1-205ENST00000409979 SHROOM4Q9ULL8 1493 aa47.25■■■■■ 5.15
AGFG1-205ENST00000409979 DCAF1Q9Y4B6 1507 aa47.2■■■■■ 5.15
AGFG1-205ENST00000409979 ABCC9O60706 1549 aa47.01■■■■■ 5.12
AGFG1-205ENST00000409979 MYO15BQ96JP2 1530 aa46.38■■■■■ 5.02
AGFG1-205ENST00000409979 NACADO15069 1562 aa46.15■■■■■ 4.98
AGFG1-205ENST00000409979 SUPT5HO00267 1087 aaKnown RBP45.91■■■■■ 4.94
AGFG1-205ENST00000409979 RB1CC1Q8TDY2 1594 aa45.77■■■■■ 4.92
AGFG1-205ENST00000409979 SCRIBQ14160 1630 aa45.65■■■■■ 4.9
AGFG1-205ENST00000409979 UNC13AQ9UPW8 1703 aa44.8■■■■■ 4.76
AGFG1-205ENST00000409979 RSF1Q96T23 1441 aaPredicted RBP44.66■■■■■ 4.74
AGFG1-205ENST00000409979 CHIC1Q5VXU3 224 aa44.45■■■■■ 4.71
AGFG1-205ENST00000409979 PABPN1Q86U42 306 aaKnown RBP eCLIP44.43■■■■■ 4.7
AGFG1-205ENST00000409979 BICRAQ9NZM4 1560 aa44.41■■■■■ 4.7
AGFG1-205ENST00000409979 CECR2Q9BXF3 1484 aa44.31■■■■■ 4.68
AGFG1-205ENST00000409979 MROH2BQ7Z745 1585 aa44.16■■■■■ 4.66
AGFG1-205ENST00000409979 BAZ1AQ9NRL2 1556 aaPredicted RBP44■■■■■ 4.63
AGFG1-205ENST00000409979 WIZO95785 1651 aa43.85■■■■■ 4.61
AGFG1-205ENST00000409979 SMARCA4P51532 1647 aa43.7■■■■■ 4.59
AGFG1-205ENST00000409979 TOP2AP11388 1531 aaKnown RBP43.39■■■■■ 4.54
AGFG1-205ENST00000409979 PEG3Q9GZU2 1588 aa43.13■■■■■ 4.49
AGFG1-205ENST00000409979 TRIM41Q8WV44 630 aa43.1■■■■■ 4.49
AGFG1-205ENST00000409979 EIF4G1Q04637 1599 aaKnown RBP43.08■■■■■ 4.49
AGFG1-205ENST00000409979 ATAD2BQ9ULI0 1458 aa43.04■■■■■ 4.48
AGFG1-205ENST00000409979 SMARCA2P51531 1590 aa43.04■■■■■ 4.48
AGFG1-205ENST00000409979 CCDC88BA6NC98 1476 aa42.99■■■■■ 4.47
AGFG1-205ENST00000409979 BAZ1BQ9UIG0 1483 aaKnown RBP42.8■■■■■ 4.44
AGFG1-205ENST00000409979 LOC105371045A0A1W2PR82 267 aa42.8■■■■■ 4.44
AGFG1-205ENST00000409979 NCAPD3P42695 1498 aa42.66■■■■■ 4.42
AGFG1-205ENST00000409979 HMGXB3Q12766 1538 aa42.53■■■■■ 4.4
AGFG1-205ENST00000409979 CC2D2AQ9P2K1 1620 aa42.45■■■■■ 4.39
AGFG1-205ENST00000409979 ABCC8Q09428 1581 aa42.39■■■■■ 4.38
AGFG1-205ENST00000409979 FAM9AQ8IZU1 332 aaPredicted RBP42.34■■■■■ 4.37
AGFG1-205ENST00000409979 WRNQ14191 1432 aaPredicted RBP eCLIP42■■■■■ 4.31
AGFG1-205ENST00000409979 EEA1Q15075 1411 aa41.88■■■■■ 4.29
AGFG1-205ENST00000409979 PCGF6Q9BYE7 350 aa41.81■■■■■ 4.28
AGFG1-205ENST00000409979 SYNJ1O43426 1573 aa41.8■■■■■ 4.28
AGFG1-205ENST00000409979 SOGA1O94964 1423 aa41.79■■■■■ 4.28
AGFG1-205ENST00000409979 CFTRP13569 1480 aa41.72■■■■■ 4.27
AGFG1-205ENST00000409979 EHMT2Q96KQ7 1210 aa41.71■■■■■ 4.27
AGFG1-205ENST00000409979 CADPSQ9ULU8 1353 aa41.61■■■■■ 4.25
AGFG1-205ENST00000409979 RUSC2Q8N2Y8 1516 aa41.58■■■■■ 4.25
AGFG1-205ENST00000409979 TRIM26Q12899 539 aaPredicted RBP41.58■■■■■ 4.25
AGFG1-205ENST00000409979 DNAJC5BQ9UF47 199 aa41.58■■■■■ 4.25
AGFG1-205ENST00000409979 CSRNP3Q8WYN3 585 aa41.57■■■■■ 4.25
AGFG1-205ENST00000409979 TOP2BQ02880 1626 aa41.55■■■■■ 4.24
AGFG1-205ENST00000409979 BIVM-ERCC5R4GMW8 1640 aa41.49■■■■■ 4.23
AGFG1-205ENST00000409979 HRCP23327 699 aa41.43■■■■■ 4.22
AGFG1-205ENST00000409979 TNIKQ9UKE5 1360 aa41.41■■■■■ 4.22
AGFG1-205ENST00000409979 PRDM2Q13029 1718 aa41.38■■■■■ 4.22
AGFG1-205ENST00000409979 GOLGA3Q08378 1498 aa41.34■■■■■ 4.21
AGFG1-205ENST00000409979 KIF21BO75037 1637 aa41.3■■■■■ 4.2
AGFG1-205ENST00000409979 NESP48681 1621 aa41.27■■■■■ 4.2
AGFG1-205ENST00000409979 CEP162Q5TB80 1403 aa41.26■■■■■ 4.2
AGFG1-205ENST00000409979 CEP164Q9UPV0 1460 aa41.25■■■■■ 4.19
AGFG1-205ENST00000409979 CUX1P39880 1505 aa41.23■■■■■ 4.19
AGFG1-205ENST00000409979 LAMC3Q9Y6N6 1575 aa41.15■■■■■ 4.18
AGFG1-205ENST00000409979 FANCD2Q9BXW9 1451 aa41.14■■■■■ 4.18
AGFG1-205ENST00000409979 UBTFP17480 764 aaKnown RBP41.12■■■■■ 4.17
AGFG1-205ENST00000409979 PDS5BQ9NTI5 1447 aa40.91■■■■■ 4.14
AGFG1-205ENST00000409979 RAPGEF2Q9Y4G8 1499 aa40.9■■■■■ 4.14
AGFG1-205ENST00000409979 KIF27Q86VH2 1401 aa40.85■■■■■ 4.13
AGFG1-205ENST00000409979 ERICH3Q5RHP9 1530 aa40.85■■■■■ 4.13
AGFG1-205ENST00000409979 PRXQ9BXM0 1461 aa40.83■■■■■ 4.13
AGFG1-205ENST00000409979 CLIP1P30622 1438 aa40.72■■■■■ 4.11
AGFG1-205ENST00000409979 DNMBPQ6XZF7 1577 aa40.7■■■■■ 4.11
AGFG1-205ENST00000409979 PPARGC1BQ86YN6 1023 aaKnown RBP40.7■■■■■ 4.11
AGFG1-205ENST00000409979 FGD5Q6ZNL6 1462 aa40.69■■■■■ 4.1
AGFG1-205ENST00000409979 TOPBP1Q92547 1522 aa40.67■■■■■ 4.1
AGFG1-205ENST00000409979 KIF21AQ7Z4S6 1674 aa40.65■■■■■ 4.1
AGFG1-205ENST00000409979 URB2Q14146 1524 aaKnown RBP40.61■■■■■ 4.09
AGFG1-205ENST00000409979 CUX2O14529 1486 aa40.54■■■■■ 4.08
AGFG1-205ENST00000409979 VPS8Q8N3P4 1428 aa40.5■■■■■ 4.07
AGFG1-205ENST00000409979 POLA1P09884 1462 aaPredicted RBP40.49■■■■■ 4.07
AGFG1-205ENST00000409979 RAD54L2Q9Y4B4 1467 aa40.41■■■■■ 4.06
AGFG1-205ENST00000409979 IGF1RP08069 1367 aa40.41■■■■■ 4.06
AGFG1-205ENST00000409979 ZEB1P37275 1124 aaPredicted RBP40.39■■■■■ 4.06
AGFG1-205ENST00000409979 MRC2Q9UBG0 1479 aa40.36■■■■■ 4.05
AGFG1-205ENST00000409979 ABCA10Q8WWZ4 1543 aa40.29■■■■■ 4.04
AGFG1-205ENST00000409979 ERCC6Q03468 1493 aa40.29■■■■■ 4.04
AGFG1-205ENST00000409979 ARAP1Q96P48 1450 aa40.21■■■■■ 4.03
AGFG1-205ENST00000409979 CARMIL1Q5VZK9 1371 aa40.21■■■■■ 4.03
AGFG1-205ENST00000409979 TTBK1Q5TCY1 1321 aaPredicted RBP40.18■■■■■ 4.02
AGFG1-205ENST00000409979 RANGAP1P46060 587 aaPredicted RBP40.17■■■■■ 4.02
AGFG1-205ENST00000409979 APLP2Q06481 763 aa40.11■■■■■ 4.01
AGFG1-205ENST00000409979 WDR62O43379 1518 aa40.1■■■■■ 4.01
AGFG1-205ENST00000409979 WDR97A6NE52 1622 aa40.07■■■■■ 4
AGFG1-205ENST00000409979 TDRD9Q8NDG6 1382 aaKnown RBP40.06■■■■■ 4
AGFG1-205ENST00000409979 ARHGAP35Q9NRY4 1499 aa40.04■■■■■ 4
AGFG1-205ENST00000409979 TARBP1Q13395 1621 aaKnown RBP40.02■■■■■ 4
AGFG1-205ENST00000409979 CUL7Q14999 1698 aa40■■■■□ 3.99
AGFG1-205ENST00000409979 THOC2Q8NI27 1593 aaKnown RBP39.96■■■■□ 3.99
AGFG1-205ENST00000409979 GAPVD1Q14C86 1478 aa39.93■■■■□ 3.98
AGFG1-205ENST00000409979 ABCA5Q8WWZ7 1642 aa39.91■■■■□ 3.98
AGFG1-205ENST00000409979 IFT140Q96RY7 1462 aa39.87■■■■□ 3.97
AGFG1-205ENST00000409979 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.81■■■■□ 3.96
AGFG1-205ENST00000409979 AQRO60306 1485 aaKnown RBP eCLIP39.78■■■■□ 3.968e-12■■■■■ 34.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms