RNA–Protein interactions for RNA: ENST00000329994.6

SLC52A2-201, Transcript of solute carrier family 52 member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A2, Length 1,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A2-201ENST00000329994 NISCHQ9Y2I1 1504 aa59.42■■■■■ 7.1
SLC52A2-201ENST00000329994 CCDC180Q9P1Z9 1646 aa51.8■■■■■ 5.88
SLC52A2-201ENST00000329994 ZCCHC6Q5VYS8 1495 aaKnown RBP49.97■■■■■ 5.59
SLC52A2-201ENST00000329994 DCAF1Q9Y4B6 1507 aa49.16■■■■■ 5.46
SLC52A2-201ENST00000329994 DCAF8L2P0C7V8 631 aa48.9■■■■■ 5.42
SLC52A2-201ENST00000329994 ABCC9O60706 1549 aa48.7■■■■■ 5.39
SLC52A2-201ENST00000329994 SHROOM4Q9ULL8 1493 aa48.52■■■■■ 5.36
SLC52A2-201ENST00000329994 MYO15BQ96JP2 1530 aa48.51■■■■■ 5.36
SLC52A2-201ENST00000329994 NACADO15069 1562 aa48.15■■■■■ 5.3
SLC52A2-201ENST00000329994 RB1CC1Q8TDY2 1594 aa47.69■■■■■ 5.23
SLC52A2-201ENST00000329994 SCRIBQ14160 1630 aa47.6■■■■■ 5.21
SLC52A2-201ENST00000329994 UNC13AQ9UPW8 1703 aa46.83■■■■■ 5.09
SLC52A2-201ENST00000329994 SUPT5HO00267 1087 aaKnown RBP46.77■■■■■ 5.08
SLC52A2-201ENST00000329994 BICRAQ9NZM4 1560 aa46.26■■■■■ 5
SLC52A2-201ENST00000329994 RSF1Q96T23 1441 aaPredicted RBP46.14■■■■■ 4.98
SLC52A2-201ENST00000329994 CECR2Q9BXF3 1484 aa46.12■■■■■ 4.97
SLC52A2-201ENST00000329994 PABPN1Q86U42 306 aaKnown RBP eCLIP45.91■■■■■ 4.94
SLC52A2-201ENST00000329994 MROH2BQ7Z745 1585 aa45.9■■■■■ 4.94
SLC52A2-201ENST00000329994 BAZ1AQ9NRL2 1556 aaPredicted RBP45.88■■■■■ 4.94
SLC52A2-201ENST00000329994 SMARCA4P51532 1647 aa45.67■■■■■ 4.9
SLC52A2-201ENST00000329994 WIZO95785 1651 aa45.58■■■■■ 4.89
SLC52A2-201ENST00000329994 PEG3Q9GZU2 1588 aa45.12■■■■■ 4.81
SLC52A2-201ENST00000329994 TOP2AP11388 1531 aaKnown RBP45.1■■■■■ 4.81
SLC52A2-201ENST00000329994 CHIC1Q5VXU3 224 aa44.91■■■■■ 4.78
SLC52A2-201ENST00000329994 EIF4G1Q04637 1599 aaKnown RBP44.84■■■■■ 4.77
SLC52A2-201ENST00000329994 SMARCA2P51531 1590 aa44.83■■■■■ 4.77
SLC52A2-201ENST00000329994 ATAD2BQ9ULI0 1458 aa44.83■■■■■ 4.77
SLC52A2-201ENST00000329994 CCDC88BA6NC98 1476 aa44.61■■■■■ 4.73
SLC52A2-201ENST00000329994 BAZ1BQ9UIG0 1483 aaKnown RBP44.59■■■■■ 4.73
SLC52A2-201ENST00000329994 NCAPD3P42695 1498 aa44.41■■■■■ 4.7
SLC52A2-201ENST00000329994 HMGXB3Q12766 1538 aa44.4■■■■■ 4.7
SLC52A2-201ENST00000329994 CC2D2AQ9P2K1 1620 aa44.13■■■■■ 4.65
SLC52A2-201ENST00000329994 TRIM41Q8WV44 630 aa43.99■■■■■ 4.63
SLC52A2-201ENST00000329994 ABCC8Q09428 1581 aa43.75■■■■■ 4.59
SLC52A2-201ENST00000329994 CFTRP13569 1480 aa43.48■■■■■ 4.55
SLC52A2-201ENST00000329994 WRNQ14191 1432 aaPredicted RBP eCLIP43.43■■■■■ 4.54
SLC52A2-201ENST00000329994 PRDM2Q13029 1718 aa43.41■■■■■ 4.54
SLC52A2-201ENST00000329994 SYNJ1O43426 1573 aa43.28■■■■■ 4.52
SLC52A2-201ENST00000329994 CADPSQ9ULU8 1353 aa43.27■■■■■ 4.52
SLC52A2-201ENST00000329994 LOC105371045A0A1W2PR82 267 aa43.17■■■■■ 4.5
SLC52A2-201ENST00000329994 FAM9AQ8IZU1 332 aaPredicted RBP43.15■■■■■ 4.5
SLC52A2-201ENST00000329994 TOP2BQ02880 1626 aa43.11■■■■■ 4.49
SLC52A2-201ENST00000329994 BIVM-ERCC5R4GMW8 1640 aa43.09■■■■■ 4.49
SLC52A2-201ENST00000329994 SOGA1O94964 1423 aa42.94■■■■■ 4.46
SLC52A2-201ENST00000329994 EEA1Q15075 1411 aa42.94■■■■■ 4.46
SLC52A2-201ENST00000329994 CUX1P39880 1505 aa42.92■■■■■ 4.46
SLC52A2-201ENST00000329994 LAMC3Q9Y6N6 1575 aa42.91■■■■■ 4.46
SLC52A2-201ENST00000329994 DNAJC5BQ9UF47 199 aa42.85■■■■■ 4.45
SLC52A2-201ENST00000329994 NESP48681 1621 aa42.83■■■■■ 4.45
SLC52A2-201ENST00000329994 FANCD2Q9BXW9 1451 aa42.8■■■■■ 4.44
SLC52A2-201ENST00000329994 RUSC2Q8N2Y8 1516 aa42.77■■■■■ 4.44
SLC52A2-201ENST00000329994 CSRNP3Q8WYN3 585 aa42.62■■■■■ 4.41
SLC52A2-201ENST00000329994 CEP164Q9UPV0 1460 aa42.52■■■■■ 4.4
SLC52A2-201ENST00000329994 PDS5BQ9NTI5 1447 aa42.52■■■■■ 4.4
SLC52A2-201ENST00000329994 EHMT2Q96KQ7 1210 aa42.51■■■■■ 4.4
SLC52A2-201ENST00000329994 DNMBPQ6XZF7 1577 aa42.5■■■■■ 4.39
SLC52A2-201ENST00000329994 FGD5Q6ZNL6 1462 aa42.41■■■■■ 4.38
SLC52A2-201ENST00000329994 KIF21BO75037 1637 aa42.41■■■■■ 4.38
SLC52A2-201ENST00000329994 KIF21AQ7Z4S6 1674 aa42.4■■■■■ 4.38
SLC52A2-201ENST00000329994 TOPBP1Q92547 1522 aa42.38■■■■■ 4.37
SLC52A2-201ENST00000329994 GOLGA3Q08378 1498 aa42.34■■■■■ 4.37
SLC52A2-201ENST00000329994 KIF27Q86VH2 1401 aa42.32■■■■■ 4.37
SLC52A2-201ENST00000329994 URB2Q14146 1524 aaKnown RBP42.26■■■■■ 4.36
SLC52A2-201ENST00000329994 TNIKQ9UKE5 1360 aa42.23■■■■■ 4.35
SLC52A2-201ENST00000329994 POLA1P09884 1462 aaPredicted RBP42.18■■■■■ 4.34
SLC52A2-201ENST00000329994 CUX2O14529 1486 aa42.16■■■■■ 4.34
SLC52A2-201ENST00000329994 PRXQ9BXM0 1461 aa42.09■■■■■ 4.33
SLC52A2-201ENST00000329994 UBTFP17480 764 aaKnown RBP42.08■■■■■ 4.33
SLC52A2-201ENST00000329994 ERICH3Q5RHP9 1530 aa42.08■■■■■ 4.33
SLC52A2-201ENST00000329994 RAPGEF2Q9Y4G8 1499 aa42.07■■■■■ 4.33
SLC52A2-201ENST00000329994 ABCA10Q8WWZ4 1543 aa42.05■■■■■ 4.32
SLC52A2-201ENST00000329994 CEP162Q5TB80 1403 aa42.02■■■■■ 4.32
SLC52A2-201ENST00000329994 RAD54L2Q9Y4B4 1467 aa42.02■■■■■ 4.32
SLC52A2-201ENST00000329994 MRC2Q9UBG0 1479 aa41.97■■■■■ 4.31
SLC52A2-201ENST00000329994 WDR97A6NE52 1622 aa41.97■■■■■ 4.31
SLC52A2-201ENST00000329994 IGF1RP08069 1367 aa41.9■■■■■ 4.3
SLC52A2-201ENST00000329994 WDR62O43379 1518 aa41.78■■■■■ 4.28
SLC52A2-201ENST00000329994 TARBP1Q13395 1621 aaKnown RBP41.77■■■■■ 4.28
SLC52A2-201ENST00000329994 ERCC6Q03468 1493 aa41.73■■■■■ 4.27
SLC52A2-201ENST00000329994 ABCA5Q8WWZ7 1642 aa41.73■■■■■ 4.27
SLC52A2-201ENST00000329994 CARMIL1Q5VZK9 1371 aa41.7■■■■■ 4.27
SLC52A2-201ENST00000329994 CUL7Q14999 1698 aa41.66■■■■■ 4.26
SLC52A2-201ENST00000329994 CLIP1P30622 1438 aa41.65■■■■■ 4.26
SLC52A2-201ENST00000329994 THOC2Q8NI27 1593 aaKnown RBP41.63■■■■■ 4.25
SLC52A2-201ENST00000329994 GAPVD1Q14C86 1478 aa41.58■■■■■ 4.25
SLC52A2-201ENST00000329994 TDRD9Q8NDG6 1382 aaKnown RBP41.57■■■■■ 4.25
SLC52A2-201ENST00000329994 IFT140Q96RY7 1462 aa41.49■■■■■ 4.23
SLC52A2-201ENST00000329994 PBRM1Q86U86 1689 aa41.42■■■■■ 4.22
SLC52A2-201ENST00000329994 PCGF6Q9BYE7 350 aa41.39■■■■■ 4.22
SLC52A2-201ENST00000329994 TRIM26Q12899 539 aaPredicted RBP41.38■■■■■ 4.22
SLC52A2-201ENST00000329994 VPS8Q8N3P4 1428 aa41.33■■■■■ 4.21
SLC52A2-201ENST00000329994 RANGAP1P46060 587 aaPredicted RBP41.3■■■■■ 4.2
SLC52A2-201ENST00000329994 AQRO60306 1485 aaKnown RBP eCLIP41.29■■■■■ 4.2
SLC52A2-201ENST00000329994 CTTNBP2Q8WZ74 1663 aa41.25■■■■■ 4.19
SLC52A2-201ENST00000329994 ZNF608Q9ULD9 1512 aaPredicted RBP41.24■■■■■ 4.19
SLC52A2-201ENST00000329994 ARAP1Q96P48 1450 aa41.24■■■■■ 4.19
SLC52A2-201ENST00000329994 GRIN2BQ13224 1484 aa41.23■■■■■ 4.19
SLC52A2-201ENST00000329994 ARHGAP35Q9NRY4 1499 aa41.2■■■■■ 4.19
SLC52A2-201ENST00000329994 EIF4G3O43432 1585 aaKnown RBP41.17■■■■■ 4.18
SLC52A2-201ENST00000329994 ADAMTS12P58397 1594 aa41.17■■■■■ 4.18
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms