RNA–Protein interactions for RNA: ENST00000375440.8

CUL4A-202, Transcript of cullin 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL4A, Length 2,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-202ENST00000375440 NISCHQ9Y2I1 1504 aa57.29■■■■■ 6.76
CUL4A-202ENST00000375440 CCDC180Q9P1Z9 1646 aa49.37■■■■■ 5.49
CUL4A-202ENST00000375440 ZCCHC6Q5VYS8 1495 aaKnown RBP48.32■■■■■ 5.33
CUL4A-202ENST00000375440 SHROOM4Q9ULL8 1493 aa47.68■■■■■ 5.22
CUL4A-202ENST00000375440 DCAF1Q9Y4B6 1507 aa47.24■■■■■ 5.15
CUL4A-202ENST00000375440 DCAF8L2P0C7V8 631 aa47.21■■■■■ 5.15
CUL4A-202ENST00000375440 SUPT5HO00267 1087 aaKnown RBP46.32■■■■■ 5.01
CUL4A-202ENST00000375440 MYO15BQ96JP2 1530 aa46.27■■■■■ 5
CUL4A-202ENST00000375440 ABCC9O60706 1549 aa46.07■■■■■ 4.97
CUL4A-202ENST00000375440 NACADO15069 1562 aa45.78■■■■■ 4.92
CUL4A-202ENST00000375440 SCRIBQ14160 1630 aa45.76■■■■■ 4.92
CUL4A-202ENST00000375440 RB1CC1Q8TDY2 1594 aa45.17■■■■■ 4.82
CUL4A-202ENST00000375440 RSF1Q96T23 1441 aaPredicted RBP44.89■■■■■ 4.78
CUL4A-202ENST00000375440 CHIC1Q5VXU3 224 aa44.79■■■■■ 4.76
CUL4A-202ENST00000375440 CECR2Q9BXF3 1484 aa44.59■■■■■ 4.73
CUL4A-202ENST00000375440 UNC13AQ9UPW8 1703 aa44.47■■■■■ 4.71
CUL4A-202ENST00000375440 MROH2BQ7Z745 1585 aa44.4■■■■■ 4.7
CUL4A-202ENST00000375440 BAZ1AQ9NRL2 1556 aaPredicted RBP44.11■■■■■ 4.65
CUL4A-202ENST00000375440 WIZO95785 1651 aa44.1■■■■■ 4.65
CUL4A-202ENST00000375440 BICRAQ9NZM4 1560 aa43.95■■■■■ 4.63
CUL4A-202ENST00000375440 SMARCA4P51532 1647 aa43.84■■■■■ 4.61
CUL4A-202ENST00000375440 PABPN1Q86U42 306 aaKnown RBP eCLIP43.73■■■■■ 4.59
CUL4A-202ENST00000375440 TOP2AP11388 1531 aaKnown RBP43.53■■■■■ 4.56
CUL4A-202ENST00000375440 TRIM41Q8WV44 630 aa43.36■■■■■ 4.53
CUL4A-202ENST00000375440 EIF4G1Q04637 1599 aaKnown RBP43.27■■■■■ 4.52
CUL4A-202ENST00000375440 LOC105371045A0A1W2PR82 267 aa43.24■■■■■ 4.51
CUL4A-202ENST00000375440 SMARCA2P51531 1590 aa43.22■■■■■ 4.51
CUL4A-202ENST00000375440 CCDC88BA6NC98 1476 aa43.2■■■■■ 4.51
CUL4A-202ENST00000375440 PEG3Q9GZU2 1588 aa43.19■■■■■ 4.51
CUL4A-202ENST00000375440 ATAD2BQ9ULI0 1458 aa42.9■■■■■ 4.46
CUL4A-202ENST00000375440 FAM9AQ8IZU1 332 aaPredicted RBP42.75■■■■■ 4.43
CUL4A-202ENST00000375440 BAZ1BQ9UIG0 1483 aaKnown RBP42.69■■■■■ 4.42
CUL4A-202ENST00000375440 ABCC8Q09428 1581 aa42.69■■■■■ 4.42
CUL4A-202ENST00000375440 NCAPD3P42695 1498 aa42.31■■■■■ 4.36
CUL4A-202ENST00000375440 HMGXB3Q12766 1538 aa42.29■■■■■ 4.36
CUL4A-202ENST00000375440 PCGF6Q9BYE7 350 aa42.24■■■■■ 4.35
CUL4A-202ENST00000375440 EHMT2Q96KQ7 1210 aa42.22■■■■■ 4.35
CUL4A-202ENST00000375440 WRNQ14191 1432 aaPredicted RBP eCLIP42.18■■■■■ 4.341e-6■■■■■ 58.5
CUL4A-202ENST00000375440 SOGA1O94964 1423 aa42.09■■■■■ 4.33
CUL4A-202ENST00000375440 SYNJ1O43426 1573 aa42.03■■■■■ 4.32
CUL4A-202ENST00000375440 EEA1Q15075 1411 aa41.96■■■■■ 4.31
CUL4A-202ENST00000375440 RUSC2Q8N2Y8 1516 aa41.91■■■■■ 4.3
CUL4A-202ENST00000375440 TRIM26Q12899 539 aaPredicted RBP41.86■■■■■ 4.29
CUL4A-202ENST00000375440 CSRNP3Q8WYN3 585 aa41.79■■■■■ 4.28
CUL4A-202ENST00000375440 HRCP23327 699 aa41.74■■■■■ 4.27
CUL4A-202ENST00000375440 TOP2BQ02880 1626 aa41.7■■■■■ 4.27
CUL4A-202ENST00000375440 CFTRP13569 1480 aa41.67■■■■■ 4.26
CUL4A-202ENST00000375440 CC2D2AQ9P2K1 1620 aa41.65■■■■■ 4.26
CUL4A-202ENST00000375440 BIVM-ERCC5R4GMW8 1640 aa41.62■■■■■ 4.25
CUL4A-202ENST00000375440 TNIKQ9UKE5 1360 aa41.59■■■■■ 4.25
CUL4A-202ENST00000375440 GOLGA3Q08378 1498 aa41.52■■■■■ 4.24
CUL4A-202ENST00000375440 CEP162Q5TB80 1403 aa41.51■■■■■ 4.23
CUL4A-202ENST00000375440 PRDM2Q13029 1718 aa41.45■■■■■ 4.23
CUL4A-202ENST00000375440 KIF21BO75037 1637 aa41.44■■■■■ 4.22
CUL4A-202ENST00000375440 CUX1P39880 1505 aa41.43■■■■■ 4.22
CUL4A-202ENST00000375440 CEP164Q9UPV0 1460 aa41.41■■■■■ 4.22
CUL4A-202ENST00000375440 UBTFP17480 764 aaKnown RBP41.39■■■■■ 4.22
CUL4A-202ENST00000375440 CADPSQ9ULU8 1353 aa41.33■■■■■ 4.21
CUL4A-202ENST00000375440 PPARGC1BQ86YN6 1023 aaKnown RBP41.18■■■■■ 4.18
CUL4A-202ENST00000375440 RAPGEF2Q9Y4G8 1499 aa41.16■■■■■ 4.18
CUL4A-202ENST00000375440 PRXQ9BXM0 1461 aa41■■■■■ 4.15
CUL4A-202ENST00000375440 KIF27Q86VH2 1401 aa40.99■■■■■ 4.15
CUL4A-202ENST00000375440 ERICH3Q5RHP9 1530 aa40.96■■■■■ 4.15
CUL4A-202ENST00000375440 CLIP1P30622 1438 aa40.94■■■■■ 4.14
CUL4A-202ENST00000375440 FANCD2Q9BXW9 1451 aa40.9■■■■■ 4.14
CUL4A-202ENST00000375440 NESP48681 1621 aa40.8■■■■■ 4.12
CUL4A-202ENST00000375440 FGD5Q6ZNL6 1462 aa40.8■■■■■ 4.12
CUL4A-202ENST00000375440 CUX2O14529 1486 aa40.73■■■■■ 4.11
CUL4A-202ENST00000375440 VPS8Q8N3P4 1428 aa40.7■■■■■ 4.11
CUL4A-202ENST00000375440 LAMC3Q9Y6N6 1575 aa40.67■■■■■ 4.1
CUL4A-202ENST00000375440 DNMBPQ6XZF7 1577 aa40.66■■■■■ 4.1
CUL4A-202ENST00000375440 TTBK1Q5TCY1 1321 aaPredicted RBP40.65■■■■■ 4.1
CUL4A-202ENST00000375440 IGF1RP08069 1367 aa40.6■■■■■ 4.09
CUL4A-202ENST00000375440 RANGAP1P46060 587 aaPredicted RBP40.57■■■■■ 4.09
CUL4A-202ENST00000375440 DNAJC5BQ9UF47 199 aa40.57■■■■■ 4.09
CUL4A-202ENST00000375440 TOPBP1Q92547 1522 aa40.57■■■■■ 4.09
CUL4A-202ENST00000375440 ZEB1P37275 1124 aaPredicted RBP40.57■■■■■ 4.08
CUL4A-202ENST00000375440 POLA1P09884 1462 aaPredicted RBP40.47■■■■■ 4.07
CUL4A-202ENST00000375440 ARAP1Q96P48 1450 aa40.45■■■■■ 4.07
CUL4A-202ENST00000375440 RAD54L2Q9Y4B4 1467 aa40.41■■■■■ 4.06
CUL4A-202ENST00000375440 ABCA10Q8WWZ4 1543 aa40.41■■■■■ 4.06
CUL4A-202ENST00000375440 CARMIL1Q5VZK9 1371 aa40.39■■■■■ 4.06
CUL4A-202ENST00000375440 URB2Q14146 1524 aaKnown RBP40.38■■■■■ 4.05
CUL4A-202ENST00000375440 PDS5BQ9NTI5 1447 aa40.34■■■■■ 4.05
CUL4A-202ENST00000375440 APLP2Q06481 763 aa40.28■■■■■ 4.04
CUL4A-202ENST00000375440 ARHGAP35Q9NRY4 1499 aa40.26■■■■■ 4.04
CUL4A-202ENST00000375440 KIF21AQ7Z4S6 1674 aa40.23■■■■■ 4.03
CUL4A-202ENST00000375440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.21■■■■■ 4.03
CUL4A-202ENST00000375440 WDR97A6NE52 1622 aa40.19■■■■■ 4.02
CUL4A-202ENST00000375440 CCER1Q8TC90 406 aaPredicted RBP40.08■■■■■ 4.01
CUL4A-202ENST00000375440 CUL7Q14999 1698 aa40.08■■■■■ 4.01
CUL4A-202ENST00000375440 ABCA5Q8WWZ7 1642 aa40.01■■■■■ 4
CUL4A-202ENST00000375440 TDRD9Q8NDG6 1382 aaKnown RBP39.94■■■■□ 3.98
CUL4A-202ENST00000375440 KANK4Q5T7N3 995 aaPredicted RBP39.94■■■■□ 3.98
CUL4A-202ENST00000375440 GAPVD1Q14C86 1478 aa39.89■■■■□ 3.98
CUL4A-202ENST00000375440 TARBP1Q13395 1621 aaKnown RBP39.88■■■■□ 3.98
CUL4A-202ENST00000375440 HNRNPUL2Q1KMD3 747 aaKnown RBP39.83■■■■□ 3.97
CUL4A-202ENST00000375440 CTTNBP2Q8WZ74 1663 aa39.83■■■■□ 3.97
CUL4A-202ENST00000375440 MRC2Q9UBG0 1479 aa39.79■■■■□ 3.96
CUL4A-202ENST00000375440 MAP3K1Q13233 1512 aa39.73■■■■□ 3.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms