RNA–Protein interactions for RNA: ENST00000376335.7

ZIC2-201, Transcript of Zic family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC2, Length 2,983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC2-201ENST00000376335 NISCHQ9Y2I1 1504 aa51.24■■■■■ 5.79
ZIC2-201ENST00000376335 SHROOM4Q9ULL8 1493 aa44.85■■■■■ 4.77
ZIC2-201ENST00000376335 SUPT5HO00267 1087 aaKnown RBP44.23■■■■■ 4.67
ZIC2-201ENST00000376335 ZCCHC6Q5VYS8 1495 aaKnown RBP43.4■■■■■ 4.54
ZIC2-201ENST00000376335 DCAF8L2P0C7V8 631 aa43.11■■■■■ 4.49
ZIC2-201ENST00000376335 MYO15BQ96JP2 1530 aa43.07■■■■■ 4.49
ZIC2-201ENST00000376335 CCDC180Q9P1Z9 1646 aa43■■■■■ 4.47
ZIC2-201ENST00000376335 CHIC1Q5VXU3 224 aa42.99■■■■■ 4.47
ZIC2-201ENST00000376335 HRCP23327 699 aa42.69■■■■■ 4.42
ZIC2-201ENST00000376335 PCGF6Q9BYE7 350 aa42.54■■■■■ 4.4
ZIC2-201ENST00000376335 PPARGC1BQ86YN6 1023 aaKnown RBP42.11■■■■■ 4.33
ZIC2-201ENST00000376335 LOC105371045A0A1W2PR82 267 aa42.04■■■■■ 4.32
ZIC2-201ENST00000376335 DCAF1Q9Y4B6 1507 aa41.68■■■■■ 4.26
ZIC2-201ENST00000376335 TRIM26Q12899 539 aaPredicted RBP41.26■■■■■ 4.2
ZIC2-201ENST00000376335 ABCC9O60706 1549 aa41.07■■■■■ 4.17
ZIC2-201ENST00000376335 FAM9AQ8IZU1 332 aaPredicted RBP40.97■■■■■ 4.15
ZIC2-201ENST00000376335 SCRIBQ14160 1630 aa40.93■■■■■ 4.14
ZIC2-201ENST00000376335 RSF1Q96T23 1441 aaPredicted RBP40.92■■■■■ 4.14
ZIC2-201ENST00000376335 TRIM41Q8WV44 630 aa40.91■■■■■ 4.14
ZIC2-201ENST00000376335 EHMT2Q96KQ7 1210 aa40.9■■■■■ 4.14
ZIC2-201ENST00000376335 RB1CC1Q8TDY2 1594 aa40.67■■■■■ 4.1
ZIC2-201ENST00000376335 ZEB1P37275 1124 aaPredicted RBP40.43■■■■■ 4.06
ZIC2-201ENST00000376335 CECR2Q9BXF3 1484 aa40.22■■■■■ 4.03
ZIC2-201ENST00000376335 NACADO15069 1562 aa40.08■■■■■ 4.01
ZIC2-201ENST00000376335 MROH2BQ7Z745 1585 aa40.04■■■■■ 4
ZIC2-201ENST00000376335 WIZO95785 1651 aa39.88■■■■□ 3.98
ZIC2-201ENST00000376335 SCAF1Q9H7N4 1312 aaKnown RBP39.88■■■■□ 3.97
ZIC2-201ENST00000376335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.83■■■■□ 3.97
ZIC2-201ENST00000376335 TTBK1Q5TCY1 1321 aaPredicted RBP39.69■■■■□ 3.94
ZIC2-201ENST00000376335 CCER1Q8TC90 406 aaPredicted RBP39.65■■■■□ 3.94
ZIC2-201ENST00000376335 BAZ1AQ9NRL2 1556 aaPredicted RBP39.43■■■■□ 3.9
ZIC2-201ENST00000376335 ABCC8Q09428 1581 aa39.35■■■■□ 3.89
ZIC2-201ENST00000376335 EIF4G1Q04637 1599 aaKnown RBP39.34■■■■□ 3.89
ZIC2-201ENST00000376335 PELP1Q8IZL8 1130 aaKnown RBP39.3■■■■□ 3.88
ZIC2-201ENST00000376335 CCDC88BA6NC98 1476 aa39.27■■■■□ 3.88
ZIC2-201ENST00000376335 NEUROD1Q13562 356 aa39.21■■■■□ 3.87
ZIC2-201ENST00000376335 ACIN1Q9UKV3 1341 aaKnown RBP39.15■■■■□ 3.86
ZIC2-201ENST00000376335 DIEXFQ68CQ4 756 aaKnown RBP39.14■■■■□ 3.86
ZIC2-201ENST00000376335 CEP162Q5TB80 1403 aa39.1■■■■□ 3.85
ZIC2-201ENST00000376335 SOGA1O94964 1423 aa39.1■■■■□ 3.85
ZIC2-201ENST00000376335 TOP2AP11388 1531 aaKnown RBP39.02■■■■□ 3.84
ZIC2-201ENST00000376335 UBTFP17480 764 aaKnown RBP38.99■■■■□ 3.83
ZIC2-201ENST00000376335 WRNQ14191 1432 aaPredicted RBP eCLIP38.96■■■■□ 3.83
ZIC2-201ENST00000376335 UNC13AQ9UPW8 1703 aa38.95■■■■□ 3.83
ZIC2-201ENST00000376335 RUSC2Q8N2Y8 1516 aa38.92■■■■□ 3.82
ZIC2-201ENST00000376335 SMARCA2P51531 1590 aa38.92■■■■□ 3.82
ZIC2-201ENST00000376335 SMARCA4P51532 1647 aa38.9■■■■□ 3.82
ZIC2-201ENST00000376335 GTF3C3Q9Y5Q9 886 aa38.88■■■■□ 3.81
ZIC2-201ENST00000376335 CSRNP3Q8WYN3 585 aa38.85■■■■□ 3.81
ZIC2-201ENST00000376335 TNIKQ9UKE5 1360 aa38.84■■■■□ 3.81
ZIC2-201ENST00000376335 CENPBP07199 599 aaPredicted RBP38.77■■■■□ 3.8
ZIC2-201ENST00000376335 HNRNPUL2Q1KMD3 747 aaKnown RBP38.61■■■■□ 3.77
ZIC2-201ENST00000376335 ZNF316A6NFI3 1004 aaPredicted RBP38.58■■■■□ 3.77
ZIC2-201ENST00000376335 BICRAQ9NZM4 1560 aa38.58■■■■□ 3.77
ZIC2-201ENST00000376335 PABPN1Q86U42 306 aaKnown RBP eCLIP38.58■■■■□ 3.77
ZIC2-201ENST00000376335 YTHDC1Q96MU7 727 aaKnown RBP38.58■■■■□ 3.77
ZIC2-201ENST00000376335 EEA1Q15075 1411 aa38.55■■■■□ 3.76
ZIC2-201ENST00000376335 GOLGA3Q08378 1498 aa38.53■■■■□ 3.76
ZIC2-201ENST00000376335 RANGAP1P46060 587 aaPredicted RBP38.44■■■■□ 3.74
ZIC2-201ENST00000376335 MIER1Q8N108 512 aa38.3■■■■□ 3.72
ZIC2-201ENST00000376335 CLIP1P30622 1438 aa38.24■■■■□ 3.71
ZIC2-201ENST00000376335 SYNJ1O43426 1573 aa38.23■■■■□ 3.71
ZIC2-201ENST00000376335 CEP164Q9UPV0 1460 aa38.21■■■■□ 3.71
ZIC2-201ENST00000376335 APLP2Q06481 763 aa38.13■■■■□ 3.69
ZIC2-201ENST00000376335 VPS8Q8N3P4 1428 aa38.05■■■■□ 3.68
ZIC2-201ENST00000376335 RAPGEF2Q9Y4G8 1499 aa38.05■■■■□ 3.68
ZIC2-201ENST00000376335 KIF21BO75037 1637 aa38.04■■■■□ 3.68
ZIC2-201ENST00000376335 PEG3Q9GZU2 1588 aa37.87■■■■□ 3.65
ZIC2-201ENST00000376335 ATAD2BQ9ULI0 1458 aa37.81■■■■□ 3.64
ZIC2-201ENST00000376335 BAZ1BQ9UIG0 1483 aaKnown RBP37.79■■■■□ 3.64
ZIC2-201ENST00000376335 KANK4Q5T7N3 995 aaPredicted RBP37.65■■■■□ 3.62
ZIC2-201ENST00000376335 DHX57Q6P158 1386 aaKnown RBP37.59■■■■□ 3.61
ZIC2-201ENST00000376335 TOP2BQ02880 1626 aa37.53■■■■□ 3.6
ZIC2-201ENST00000376335 ARAP1Q96P48 1450 aa37.49■■■■□ 3.59
ZIC2-201ENST00000376335 ITGAEP38570 1179 aa37.46■■■■□ 3.59
ZIC2-201ENST00000376335 PRXQ9BXM0 1461 aa37.38■■■■□ 3.57
ZIC2-201ENST00000376335 CLSPNQ9HAW4 1339 aa37.36■■■■□ 3.57
ZIC2-201ENST00000376335 MYT1Q01538 1121 aa37.31■■■■□ 3.56
ZIC2-201ENST00000376335 BIVM-ERCC5R4GMW8 1640 aa37.3■■■■□ 3.56
ZIC2-201ENST00000376335 ERICH3Q5RHP9 1530 aa37.3■■■■□ 3.56
ZIC2-201ENST00000376335 SUPT16HQ9Y5B9 1047 aaKnown RBP37.21■■■■□ 3.55
ZIC2-201ENST00000376335 CUX1P39880 1505 aa37.19■■■■□ 3.54
ZIC2-201ENST00000376335 RRBP1Q9P2E9 1410 aaKnown RBP37.18■■■■□ 3.54
ZIC2-201ENST00000376335 CCNB3Q8WWL7 1395 aa37.15■■■■□ 3.54
ZIC2-201ENST00000376335 KIF27Q86VH2 1401 aa37.14■■■■□ 3.54
ZIC2-201ENST00000376335 KCNH8Q96L42 1107 aa37.1■■■■□ 3.53
ZIC2-201ENST00000376335 ARHGAP35Q9NRY4 1499 aa37.08■■■■□ 3.53
ZIC2-201ENST00000376335 NCAPD3P42695 1498 aa36.99■■■■□ 3.51
ZIC2-201ENST00000376335 RAB3GAP2Q9H2M9 1393 aa36.97■■■■□ 3.51
ZIC2-201ENST00000376335 HMGXB3Q12766 1538 aa36.94■■■■□ 3.5
ZIC2-201ENST00000376335 CUX2O14529 1486 aa36.93■■■■□ 3.5
ZIC2-201ENST00000376335 CC2D2AQ9P2K1 1620 aa36.91■■■■□ 3.5
ZIC2-201ENST00000376335 SIN3AQ96ST3 1273 aa36.84■■■■□ 3.49
ZIC2-201ENST00000376335 MAPKBP1O60336 1514 aa36.82■■■■□ 3.49
ZIC2-201ENST00000376335 FAM50AQ14320 339 aaKnown RBP36.82■■■■□ 3.49
ZIC2-201ENST00000376335 ATP1B4Q9UN42 357 aaPredicted RBP36.8■■■■□ 3.48
ZIC2-201ENST00000376335 DDX10Q13206 875 aaKnown RBP36.79■■■■□ 3.48
ZIC2-201ENST00000376335 P3H3Q8IVL6 736 aa36.79■■■■□ 3.48
ZIC2-201ENST00000376335 BCANQ96GW7 911 aa36.79■■■■□ 3.48
ZIC2-201ENST00000376335 CFTRP13569 1480 aa36.78■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms