RNA–Protein interactions for RNA: ENST00000430524.5

RANBP1-208, Transcript of RAN binding protein 1, humanhuman

TSL 3 BASIC

Gene RANBP1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP1-208ENST00000430524 DKC1O60832 514 aaKnown RBP eCLIP16.41■□□□□ 0.221e-323■■■■■ 29.5
RANBP1-208ENST00000430524 AATFQ9NY61 560 aaKnown RBP eCLIP17.6■□□□□ 0.411e-45■■■■■ 31.9
RANBP1-208ENST00000430524 DDX3XO00571 662 aaKnown RBP eCLIP15.42■□□□□ 0.062e-41■■■■■ 28.1
RANBP1-208ENST00000430524 YBX3P16989 372 aaKnown RBP eCLIP17.91■□□□□ 0.462e-33■□□□□ 9.3
RANBP1-208ENST00000430524 PABPC4Q13310 644 aaKnown RBP eCLIP17.04■□□□□ 0.322e-31■■■■■ 29.6
RANBP1-208ENST00000430524 RPS3P23396 243 aaKnown RBP eCLIP14.43□□□□□ -0.12e-29■□□□□ 11.1
RANBP1-208ENST00000430524 SUB1P53999 127 aaKnown RBP eCLIP11.51□□□□□ -0.574e-29■■■■■ 33.8
RANBP1-208ENST00000430524 EIF4G2P78344 907 aaKnown RBP eCLIP20.59■□□□□ 0.892e-20■■■■■ 114.8
RANBP1-208ENST00000430524 SF3B4Q15427 424 aaKnown RBP eCLIP13.17□□□□□ -0.39e-20■■■■■ 51.2
RANBP1-208ENST00000430524 RBM5P52756 815 aaKnown RBP eCLIP17.68■□□□□ 0.421e-19■■■■□ 25.8
RANBP1-208ENST00000430524 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.59□□□□□ -0.072e-17■□□□□ 8.1
RANBP1-208ENST00000430524 EWSR1Q01844 656 aaKnown RBP eCLIP11.36□□□□□ -0.593e-17■■■■■ 69.6
RANBP1-208ENST00000430524 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.68■□□□□ 0.13e-17■■□□□ 12.3
RANBP1-208ENST00000430524 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.26■□□□□ 0.034e-16■■■■■ 72.4
RANBP1-208ENST00000430524 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.22■□□□□ 0.352e-14■■□□□ 12.7
RANBP1-208ENST00000430524 SF3A3Q12874 501 aaKnown RBP eCLIP13.92□□□□□ -0.182e-14■■■■□ 20.5
RANBP1-208ENST00000430524 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.28□□□□□ -0.287e-12■■□□□ 12.7
RANBP1-208ENST00000430524 GTF2F1P35269 517 aaKnown RBP eCLIP15.43■□□□□ 0.064e-11■■■■■ 88.5
RANBP1-208ENST00000430524 LARP4Q71RC2 724 aaKnown RBP eCLIP13.83□□□□□ -0.197e-11■■□□□ 12
RANBP1-208ENST00000430524 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.54■■□□□ 1.28e-11■■■□□ 18.5
RANBP1-208ENST00000430524 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.5□□□□□ -0.258e-11■■■■■ 103.1
RANBP1-208ENST00000430524 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.26■□□□□ 0.679e-11■□□□□ 10.7
RANBP1-208ENST00000430524 FUSP35637 526 aaKnown RBP eCLIP9.55□□□□□ -0.889e-11■■■■■ 44.3
RANBP1-208ENST00000430524 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.6□□□□□ -0.071e-10■■■■■ 35.3
RANBP1-208ENST00000430524 XRCC6P12956 609 aaKnown RBP eCLIP16.29■□□□□ 0.21e-10■□□□□ 8.7
RANBP1-208ENST00000430524 PUM1Q14671 1186 aaKnown RBP eCLIP14□□□□□ -0.171e-10■□□□□ 10.7
RANBP1-208ENST00000430524 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.32■□□□□ 0.042e-10■■■■■ 75.6
RANBP1-208ENST00000430524 SMNDC1O75940 238 aaKnown RBP eCLIP13.01□□□□□ -0.332e-10■■■■□ 25
RANBP1-208ENST00000430524 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.89■□□□□ 0.133e-10■■■□□ 15.6
RANBP1-208ENST00000430524 EFTUD2Q15029 972 aaKnown RBP eCLIP14.47□□□□□ -0.091e-9■■■■■ 43.3
RANBP1-208ENST00000430524 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.16■■□□□ 1.141e-9■■■■□ 20.2
RANBP1-208ENST00000430524 RBM22Q9NW64 420 aaKnown RBP eCLIP14.9□□□□□ -0.023e-9■■■■■ 26.8
RANBP1-208ENST00000430524 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.74■■□□□ 1.074e-9■■■□□ 18.3
RANBP1-208ENST00000430524 TIA1P31483 386 aaKnown RBP eCLIP13.87□□□□□ -0.195e-9■■■■■ 36.9
RANBP1-208ENST00000430524 AQRO60306 1485 aaKnown RBP eCLIP24.3■■□□□ 1.485e-9■■■■□ 20.9
RANBP1-208ENST00000430524 SAFB2Q14151 953 aaKnown RBP eCLIP20.57■□□□□ 0.886e-9■■■■□ 19.7
RANBP1-208ENST00000430524 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.09□□□□□ -0.476e-9■□□□□ 11.2
RANBP1-208ENST00000430524 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.2■□□□□ 0.029e-9■■■■■ 29.2
RANBP1-208ENST00000430524 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.47■□□□□ 0.239e-9■■■■■ 32.4
RANBP1-208ENST00000430524 RBFOX2O43251 390 aaKnown RBP eCLIP11.72□□□□□ -0.531e-8■■■■□ 26.1
RANBP1-208ENST00000430524 EIF3DO15371 548 aaKnown RBP eCLIP16.08■□□□□ 0.161e-8■□□□□ 10.3
RANBP1-208ENST00000430524 NOLC1Q14978 699 aaKnown RBP eCLIP16■□□□□ 0.151e-8■□□□□ 11
RANBP1-208ENST00000430524 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.73□□□□□ -0.212e-8■□□□□ 10
RANBP1-208ENST00000430524 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.89■□□□□ 0.132e-8■■■□□ 15.6
RANBP1-208ENST00000430524 AGGF1Q8N302 714 aaeCLIP14.56□□□□□ -0.082e-8■■□□□ 12.2
RANBP1-208ENST00000430524 FTOQ9C0B1 505 aaKnown RBP eCLIP16.55■□□□□ 0.242e-8■■■■□ 25.3
RANBP1-208ENST00000430524 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.91□□□□□ -0.54e-8■■■■□ 25.2
RANBP1-208ENST00000430524 KHSRPQ92945 711 aaKnown RBP eCLIP15.24■□□□□ 0.034e-8■■□□□ 14.2
RANBP1-208ENST00000430524 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.6■□□□□ 0.095e-8■■■□□ 17.3
RANBP1-208ENST00000430524 EIF3GO75821 320 aaKnown RBP eCLIP11.04□□□□□ -0.646e-8■■■■□ 20.9
RANBP1-208ENST00000430524 HNRNPUQ00839 825 aaKnown RBP eCLIP19.24■□□□□ 0.678e-8■□□□□ 8.1
RANBP1-208ENST00000430524 NONOQ15233 471 aaKnown RBP eCLIP16.71■□□□□ 0.271e-7■■■■□ 19.3
RANBP1-208ENST00000430524 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.68□□□□□ -0.061e-7■■■■■ 34.3
RANBP1-208ENST00000430524 RBM15Q96T37 977 aaKnown RBP eCLIP14.82□□□□□ -0.041e-7■□□□□ 8.3
RANBP1-208ENST00000430524 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.6□□□□□ -0.071e-7■■■□□ 14.9
RANBP1-208ENST00000430524 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.69■□□□□ 0.262e-7■■■■□ 23.8
RANBP1-208ENST00000430524 TAF15Q92804 592 aaKnown RBP eCLIP11.57□□□□□ -0.562e-7■■■■□ 21.3
RANBP1-208ENST00000430524 CPSF6Q16630 551 aaKnown RBP eCLIP14.05□□□□□ -0.163e-7■□□□□ 11.2
RANBP1-208ENST00000430524 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.86□□□□□ -0.353e-7■■■□□ 17.6
RANBP1-208ENST00000430524 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.26■□□□□ 0.353e-7■■■□□ 16.2
RANBP1-208ENST00000430524 HNRNPMP52272 730 aaKnown RBP eCLIP22.23■■□□□ 1.153e-7■■■□□ 14.9
RANBP1-208ENST00000430524 ZRANB2O95218 330 aaKnown RBP eCLIP15.11■□□□□ 0.014e-7■■■■□ 23.4
RANBP1-208ENST00000430524 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.5■□□□□ 0.074e-7■□□□□ 10.5
RANBP1-208ENST00000430524 PRPF4O43172 522 aaKnown RBP eCLIP14.2□□□□□ -0.145e-7■■■■□ 26.1
RANBP1-208ENST00000430524 AARSP49588 968 aaKnown RBP eCLIP15.64■□□□□ 0.095e-7■■■■□ 24.8
RANBP1-208ENST00000430524 DDX42Q86XP3 938 aaKnown RBP eCLIP15.24■□□□□ 0.036e-7■■■□□ 19.2
RANBP1-208ENST00000430524 PCBP2Q15366 365 aaKnown RBP eCLIP14.11□□□□□ -0.157e-7■■■■■ 36.9
RANBP1-208ENST00000430524 DDX6P26196 483 aaKnown RBP eCLIP15.3■□□□□ 0.048e-7■■□□□ 13.3
RANBP1-208ENST00000430524 TARDBPQ13148 414 aaKnown RBP eCLIP13.98□□□□□ -0.178e-7■■■■■ 40
RANBP1-208ENST00000430524 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.95□□□□□ -0.029e-7■■□□□ 12
RANBP1-208ENST00000430524 LSM11P83369 360 aaKnown RBP eCLIP13.11□□□□□ -0.319e-7■■■□□ 19.1
RANBP1-208ENST00000430524 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.52■□□□□ 0.089e-7■□□□□ 9.7
RANBP1-208ENST00000430524 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.01□□□□□ -0.179e-7■■■■■ 61.4
RANBP1-208ENST00000430524 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.21■□□□□ 0.021e-6■□□□□ 11.1
RANBP1-208ENST00000430524 WRNQ14191 1432 aaPredicted RBP eCLIP24.87■■□□□ 1.571e-6■■■■□ 22.5
RANBP1-208ENST00000430524 TIAL1Q01085 375 aaKnown RBP eCLIP14.3□□□□□ -0.121e-6■■■■□ 24.3
RANBP1-208ENST00000430524 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.36■□□□□ 0.371e-6■□□□□ 10.8
RANBP1-208ENST00000430524 ZC3H11AO75152 810 aaKnown RBP eCLIP15.81■□□□□ 0.121e-6■■■□□ 17.1
RANBP1-208ENST00000430524 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.29■□□□□ 0.041e-6■□□□□ 10.7
RANBP1-208ENST00000430524 NCBP2P52298 156 aaKnown RBP eCLIP13.73□□□□□ -0.212e-6■■■■□ 22.6
RANBP1-208ENST00000430524 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.76■□□□□ 0.112e-6■■■■■ 55.9
RANBP1-208ENST00000430524 AKAP1Q92667 903 aaKnown RBP eCLIP12.63□□□□□ -0.392e-6■■■■■ 27.8
RANBP1-208ENST00000430524 CDC40O60508 579 aaKnown RBP eCLIP13.35□□□□□ -0.272e-6■■■■□ 23.1
RANBP1-208ENST00000430524 SRSF7Q16629 238 aaKnown RBP eCLIP12.02□□□□□ -0.492e-6■■□□□ 11.9
RANBP1-208ENST00000430524 SF3B1O75533 1304 aaKnown RBP eCLIP15.71■□□□□ 0.112e-6■■■■■ 30.9
RANBP1-208ENST00000430524 TROVE2P10155 538 aaKnown RBP eCLIP13.96□□□□□ -0.172e-6■■□□□ 12
RANBP1-208ENST00000430524 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.16■□□□□ 0.023e-6■■■□□ 18.8
RANBP1-208ENST00000430524 DDX21Q9NR30 783 aaKnown RBP eCLIP18.7■□□□□ 0.583e-6■■■■■ 34.3
RANBP1-208ENST00000430524 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.01■□□□□ 0.953e-6■■□□□ 12
RANBP1-208ENST00000430524 GPKOWQ92917 476 aaPredicted RBP eCLIP16.88■□□□□ 0.294e-6■□□□□ 11
RANBP1-208ENST00000430524 G3BP1Q13283 466 aaKnown RBP eCLIP18.15■□□□□ 0.58e-6■■□□□ 11.5
Retrieved 91 of 91 RNA–protein pairs in 18.3 ms