Protein–RNA interactions for Protein: Q86XP3

DDX42, ATP-dependent RNA helicase DDX42, humanhuman

Known RBP eCLIP

Length 938 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42Q86XP3 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC13.27□□□□□ -0.291e-6■■■■■ 217.1
DDX42Q86XP3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.199e-8■■■■■ 81.4
DDX42Q86XP3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.49□□□□□ -1.699e-8■■■■■ 81.4
DDX42Q86XP3 NEDD4-209ENST00000508871 5707 ntTSL 1 (best)4.47□□□□□ -1.699e-8■■■■■ 81.4
DDX42Q86XP3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.11□□□□□ -1.919e-8■■■■■ 81.4
DDX42Q86XP3 NEDD4-204ENST00000503468 6339 ntTSL 1 (best)2.91□□□□□ -1.949e-8■■■■■ 81.4
DDX42Q86XP3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.5□□□□□ -2.019e-8■■■■■ 81.4
DDX42Q86XP3 WDR74-208ENST00000538098 548 ntTSL 418.54■□□□□ 0.568e-23■■■■■ 79
DDX42Q86XP3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.448e-23■■■■■ 79
DDX42Q86XP3 RNU2-2P-201ENST00000410396 191 ntBASIC2.09□□□□□ -2.078e-23■■■■■ 79
DDX42Q86XP3 SNORD3B-1-201ENST00000577988 758 ntBASIC14.63□□□□□ -0.074e-12■■■■■ 60.5
DDX42Q86XP3 SNORD3B-1-203ENST00000631292 217 nt11.64□□□□□ -0.554e-12■■■■■ 60.5
DDX42Q86XP3 SNORD3B-1-202ENST00000617128 218 nt11.52□□□□□ -0.574e-12■■■■■ 60.5
DDX42Q86XP3 YPEL3-208ENST00000566401 522 ntTSL 320.34■□□□□ 0.856e-10■■■■■ 46
DDX42Q86XP3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.34■□□□□ 0.856e-10■■■■■ 46
DDX42Q86XP3 YPEL3-205ENST00000565110 575 ntTSL 520.33■□□□□ 0.856e-10■■■■■ 46
DDX42Q86XP3 YPEL3-206ENST00000565479 865 ntTSL 520.08■□□□□ 0.816e-10■■■■■ 46
DDX42Q86XP3 YPEL3-210ENST00000568674 371 ntTSL 219.73■□□□□ 0.756e-10■■■■■ 46
DDX42Q86XP3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.746e-10■■■■■ 46
DDX42Q86XP3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.5■□□□□ 0.716e-10■■■■■ 46
DDX42Q86XP3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.656e-10■■■■■ 46
DDX42Q86XP3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.556e-10■■■■■ 46
DDX42Q86XP3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.32■□□□□ 0.366e-10■■■■■ 46
DDX42Q86XP3 YPEL3-211ENST00000568681 1739 ntTSL 216.45■□□□□ 0.226e-10■■■■■ 46
DDX42Q86XP3 LINC00854-214ENST00000615433 874 ntAPPRIS ALT2 TSL 59.82□□□□□ -0.841e-42■■■■■ 42.3
DDX42Q86XP3 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC9.14□□□□□ -0.951e-42■■■■■ 42.3
DDX42Q86XP3 U2.6-201ENST00000619225 191 ntBASIC2.7□□□□□ -1.981e-42■■■■■ 42.3
DDX42Q86XP3 TFG-205ENST00000479672 776 ntTSL 324.6■■□□□ 1.536e-9■■■■■ 41.4
DDX42Q86XP3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.246e-9■■■■■ 41.4
DDX42Q86XP3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.14■■□□□ 1.136e-9■■■■■ 41.4
DDX42Q86XP3 TFG-207ENST00000487505 913 ntTSL 319.27■□□□□ 0.686e-9■■■■■ 41.4
DDX42Q86XP3 TFG-203ENST00000463568 723 ntTSL 318.06■□□□□ 0.486e-9■■■■■ 41.4
DDX42Q86XP3 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC13.75□□□□□ -0.216e-9■■■■■ 41.4
DDX42Q86XP3 TFG-202ENST00000418917 1716 ntAPPRIS ALT1 TSL 3 BASIC13.4□□□□□ -0.266e-9■■■■■ 41.4
DDX42Q86XP3 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.966e-9■■■■■ 41.4
DDX42Q86XP3 RICTOR-206ENST00000510711 3126 ntTSL 210.7□□□□□ -0.72e-7■■■■■ 39.7
DDX42Q86XP3 RICTOR-209ENST00000514735 686 ntTSL 38.21□□□□□ -1.12e-7■■■■■ 39.7
DDX42Q86XP3 RICTOR-208ENST00000513566 1762 ntTSL 1 (best)7.06□□□□□ -1.282e-7■■■■■ 39.7
DDX42Q86XP3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.47□□□□□ -1.852e-7■■■■■ 39.7
DDX42Q86XP3 RICTOR-207ENST00000511516 7312 ntTSL 1 (best)2.77□□□□□ -1.972e-7■■■■■ 39.7
DDX42Q86XP3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.982e-7■■■■■ 39.7
DDX42Q86XP3 HERPUD1-215ENST00000568676 571 ntTSL 216.84■□□□□ 0.292e-8■■■■■ 39.1
DDX42Q86XP3 HERPUD1-205ENST00000562914 570 ntTSL 216.84■□□□□ 0.292e-8■■■■■ 39.1
DDX42Q86XP3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.222e-8■■■■■ 39.1
DDX42Q86XP3 HERPUD1-219ENST00000570273 1425 ntTSL 1 (best)15.94■□□□□ 0.142e-8■■■■■ 39.1
DDX42Q86XP3 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.032e-8■■■■■ 39.1
DDX42Q86XP3 HERPUD1-210ENST00000565966 798 ntTSL 514.56□□□□□ -0.082e-8■■■■■ 39.1
DDX42Q86XP3 HERPUD1-218ENST00000569569 1125 ntTSL 214.56□□□□□ -0.082e-8■■■■■ 39.1
DDX42Q86XP3 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.55□□□□□ -0.082e-8■■■■■ 39.1
DDX42Q86XP3 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC13.93□□□□□ -0.182e-8■■■■■ 39.1
DDX42Q86XP3 HNRNPK-209ENST00000483135 900 ntTSL 26.71□□□□□ -1.343e-7■■■■■ 38.1
DDX42Q86XP3 HNRNPK-207ENST00000472778 822 ntTSL 36.71□□□□□ -1.343e-7■■■■■ 38.1
DDX42Q86XP3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.61■□□□□ 0.256e-8■■■■■ 36.8
DDX42Q86XP3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.086e-8■■■■■ 36.8
DDX42Q86XP3 DIP2A-208ENST00000478105 3234 ntTSL 212.78□□□□□ -0.366e-8■■■■■ 36.8
DDX42Q86XP3 DIP2A-202ENST00000417564 6967 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.676e-8■■■■■ 36.8
DDX42Q86XP3 ASNS-210ENST00000448127 579 ntTSL 29.49□□□□□ -0.897e-15■■■■■ 36.8
DDX42Q86XP3 ASNS-211ENST00000451771 562 ntTSL 220.16■□□□□ 0.821e-9■■■■■ 36.1
DDX42Q86XP3 ASNS-212ENST00000453600 573 ntTSL 315.25■□□□□ 0.031e-9■■■■■ 36.1
DDX42Q86XP3 ARFGAP2-227ENST00000533243 1558 ntTSL 221.22■□□□□ 0.994e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.3■□□□□ 0.684e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.1■□□□□ 0.334e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-212ENST00000527097 942 ntTSL 216.44■□□□□ 0.224e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-220ENST00000529455 840 ntTSL 516.19■□□□□ 0.184e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-207ENST00000525398 1000 ntTSL 315.24■□□□□ 0.034e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-226ENST00000532478 940 ntTSL 514.63□□□□□ -0.074e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-217ENST00000528444 730 ntTSL 514.63□□□□□ -0.074e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-206ENST00000525314 785 ntTSL 314.39□□□□□ -0.114e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-224ENST00000531750 649 ntTSL 414.39□□□□□ -0.114e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-201ENST00000395449 1772 ntTSL 513.91□□□□□ -0.184e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-214ENST00000527927 850 ntTSL 512.8□□□□□ -0.364e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-225ENST00000532438 740 ntTSL 412.26□□□□□ -0.454e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-205ENST00000524782 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.524e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-210ENST00000526342 474 ntTSL 59.99□□□□□ -0.814e-7■■■■■ 35.7
DDX42Q86XP3 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.49□□□□□ -1.214e-7■■■■■ 35.7
DDX42Q86XP3 ASNS-204ENST00000414884 584 ntTSL 220.07■□□□□ 0.82e-11■■■■■ 35.7
DDX42Q86XP3 ASNS-208ENST00000442734 828 ntTSL 216.58■□□□□ 0.242e-11■■■■■ 35.7
DDX42Q86XP3 ANKRD12-206ENST00000577992 390 ntTSL 323.84■■□□□ 1.412e-7■■■■■ 34.5
DDX42Q86XP3 SLC37A3-204ENST00000460560 2111 ntTSL 519.27■□□□□ 0.672e-7■■■■■ 34.5
DDX42Q86XP3 TVP23C-CDRT4-204ENST00000557349 1005 ntTSL 217.6■□□□□ 0.412e-7■■■■■ 34.5
DDX42Q86XP3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.51■□□□□ 0.392e-7■■■■■ 34.5
DDX42Q86XP3 ANKRD12-209ENST00000585234 313 ntTSL 315.31■□□□□ 0.042e-7■■■■■ 34.5
DDX42Q86XP3 SLC37A3-216ENST00000484416 538 ntTSL 414.56□□□□□ -0.082e-7■■■■■ 34.5
DDX42Q86XP3 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.082e-7■■■■■ 34.5
DDX42Q86XP3 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.092e-7■■■■■ 34.5
DDX42Q86XP3 ANKRD12-204ENST00000540578 1338 ntTSL 1 (best)14.07□□□□□ -0.162e-7■■■■■ 34.5
DDX42Q86XP3 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC13.78□□□□□ -0.22e-6■■■■■ 34.5
DDX42Q86XP3 SLC37A3-203ENST00000447932 3254 ntTSL 1 (best) BASIC13.32□□□□□ -0.282e-7■■■■■ 34.5
DDX42Q86XP3 SLC37A3-222ENST00000490760 574 ntTSL 512.33□□□□□ -0.442e-7■■■■■ 34.5
DDX42Q86XP3 SLC37A3-220ENST00000485861 534 ntTSL 311.94□□□□□ -0.52e-7■■■■■ 34.5
DDX42Q86XP3 ANKRD12-207ENST00000581635 631 ntTSL 411.81□□□□□ -0.522e-7■■■■■ 34.5
DDX42Q86XP3 SLC37A3-215ENST00000477571 3488 ntTSL 510.86□□□□□ -0.672e-7■■■■■ 34.5
DDX42Q86XP3 CDRT4-203ENST00000524205 632 ntAPPRIS ALT2 TSL 210.81□□□□□ -0.682e-7■■■■■ 34.5
DDX42Q86XP3 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC8.91□□□□□ -0.982e-7■■■■■ 34.5
DDX42Q86XP3 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.312e-7■■■■■ 34.5
DDX42Q86XP3 TVP23C-CDRT4-201ENST00000481756 556 ntTSL 46.57□□□□□ -1.362e-7■■■■■ 34.5
DDX42Q86XP3 SLC37A3-219ENST00000485734 578 ntTSL 44.8□□□□□ -1.642e-7■■■■■ 34.5
DDX42Q86XP3 MIR6758-201ENST00000620653 63 ntBASIC4.74□□□□□ -1.652e-7■■■■■ 34.5
DDX42Q86XP3 TVP23C-CDRT4-202ENST00000518506 520 ntTSL 52.62□□□□□ -1.992e-7■■■■■ 34.5
DDX42Q86XP3 SRSF6-202ENST00000483871 1680 ntTSL 214.64□□□□□ -0.072e-10■■■■■ 33.6
Retrieved 100 of 2,477 protein–RNA pairs in 23.5 ms