Protein–RNA interactions for Protein: Q9UNX4

WDR3, WD repeat-containing protein 3, humanhuman

Known RBP eCLIP

Length 943 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR3Q9UNX4 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC13.45□□□□□ -0.268e-7■■■■■ 338
WDR3Q9UNX4 SNORD3B-1-201ENST00000577988 758 ntBASIC14.67□□□□□ -0.063e-25■■■■■ 327.1
WDR3Q9UNX4 SNORD3B-1-203ENST00000631292 217 nt11.87□□□□□ -0.513e-25■■■■■ 327.1
WDR3Q9UNX4 SNORD3B-1-202ENST00000617128 218 nt11.7□□□□□ -0.543e-25■■■■■ 327.1
WDR3Q9UNX4 AC007952.4-201ENST00000573866 637 ntBASIC14.61□□□□□ -0.071e-323■■■■■ 281.4
WDR3Q9UNX4 SNORD3D-202ENST00000630092 217 ntBASIC11.87□□□□□ -0.511e-323■■■■■ 281.4
WDR3Q9UNX4 SNORD3D-201ENST00000619178 218 ntBASIC11.7□□□□□ -0.541e-323■■■■■ 281.4
WDR3Q9UNX4 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.685e-7■■■■■ 141.2
WDR3Q9UNX4 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.29□□□□□ -1.245e-7■■■■■ 141.2
WDR3Q9UNX4 TNKS-203ENST00000517770 574 ntTSL 45.73□□□□□ -1.495e-7■■■■■ 141.2
WDR3Q9UNX4 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC13.28□□□□□ -0.281e-12■■■■■ 119.3
WDR3Q9UNX4 TSPEAR-AS2-203ENST00000465978 345 ntTSL 512.85□□□□□ -0.351e-12■■■■■ 119.3
WDR3Q9UNX4 UBE2H-208ENST00000490974 572 ntTSL 523.95■■□□□ 1.426e-12■■■■■ 102.8
WDR3Q9UNX4 UBE2H-203ENST00000472396 758 ntTSL 522.64■■□□□ 1.216e-12■■■■■ 102.8
WDR3Q9UNX4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.856e-12■■■■■ 102.8
WDR3Q9UNX4 SNORD3C-201ENST00000580533 581 ntBASIC12.45□□□□□ -0.421e-323■■■■■ 97.5
WDR3Q9UNX4 SNORD3C-203ENST00000625845 217 nt11.87□□□□□ -0.511e-323■■■■■ 97.5
WDR3Q9UNX4 SNORD3C-202ENST00000620446 218 nt11.7□□□□□ -0.541e-323■■■■■ 97.5
WDR3Q9UNX4 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC13.45□□□□□ -0.268e-8■■■■■ 92.8
WDR3Q9UNX4 PHF19-213ENST00000487555 1092 ntTSL 1 (best)15.6■□□□□ 0.098e-10■■■■■ 91.8
WDR3Q9UNX4 PHF19-208ENST00000462229 550 ntTSL 214.7□□□□□ -0.068e-10■■■■■ 91.8
WDR3Q9UNX4 THRA-205ENST00000577288 581 ntTSL 426.88■■□□□ 1.894e-10■■■■■ 87
WDR3Q9UNX4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.84■■□□□ 1.894e-10■■■■■ 87
WDR3Q9UNX4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.59■■□□□ 1.854e-10■■■■■ 87
WDR3Q9UNX4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.824e-10■■■■■ 87
WDR3Q9UNX4 THRA-210ENST00000585047 574 ntTSL 426.02■■□□□ 1.764e-10■■■■■ 87
WDR3Q9UNX4 THRA-208ENST00000578218 907 ntTSL 425.96■■□□□ 1.754e-10■■■■■ 87
WDR3Q9UNX4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.17■■□□□ 1.464e-10■■■■■ 87
WDR3Q9UNX4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.91■■□□□ 1.424e-10■■■■■ 87
WDR3Q9UNX4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.79■■□□□ 1.44e-10■■■■■ 87
WDR3Q9UNX4 APC-209ENST00000509732 524 ntTSL 422.49■■□□□ 1.194e-10■■■■■ 87
WDR3Q9UNX4 APC-205ENST00000505350 573 ntTSL 322.49■■□□□ 1.194e-10■■■■■ 87
WDR3Q9UNX4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.854e-10■■■■■ 87
WDR3Q9UNX4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.674e-10■■■■■ 87
WDR3Q9UNX4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.594e-10■■■■■ 87
WDR3Q9UNX4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.274e-10■■■■■ 87
WDR3Q9UNX4 APC-206ENST00000507379 3602 ntTSL 215.3■□□□□ 0.044e-10■■■■■ 87
WDR3Q9UNX4 NCOR2-207ENST00000420698 1752 ntTSL 216.62■□□□□ 0.254e-8■■■■■ 82.6
WDR3Q9UNX4 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.064e-8■■■■■ 82.6
WDR3Q9UNX4 NCOR2-212ENST00000448008 735 ntTSL 514.73□□□□□ -0.054e-8■■■■■ 82.6
WDR3Q9UNX4 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.144e-8■■■■■ 82.6
WDR3Q9UNX4 NCOR2-215ENST00000458234 4675 ntAPPRIS ALT2 TSL 1 (best)14.12□□□□□ -0.154e-8■■■■■ 82.6
WDR3Q9UNX4 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.224e-8■■■■■ 82.6
WDR3Q9UNX4 NCOR2-224ENST00000542927 828 ntTSL 313.1□□□□□ -0.314e-8■■■■■ 82.6
WDR3Q9UNX4 HELZ2-201ENST00000370082 1827 ntTSL 224.24■■□□□ 1.473e-9■■■■■ 79.1
WDR3Q9UNX4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.963e-9■■■■■ 79.1
WDR3Q9UNX4 PLEKHA2-203ENST00000519640 565 ntTSL 520.28■□□□□ 0.843e-9■■■■■ 79.1
WDR3Q9UNX4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.95■□□□□ 0.783e-9■■■■■ 79.1
WDR3Q9UNX4 HELZ2-206ENST00000479540 3079 ntTSL 1 (best)18.52■□□□□ 0.553e-9■■■■■ 79.1
WDR3Q9UNX4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.49■□□□□ 0.393e-9■■■■■ 79.1
WDR3Q9UNX4 GALNS-203ENST00000562593 5682 ntTSL 1 (best)17.27■□□□□ 0.353e-9■■■■■ 79.1
WDR3Q9UNX4 GALNS-209ENST00000567525 1953 ntTSL 215.38■□□□□ 0.053e-9■■■■■ 79.1
WDR3Q9UNX4 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.023e-9■■■■■ 79.1
WDR3Q9UNX4 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC13.71□□□□□ -0.213e-9■■■■■ 79.1
WDR3Q9UNX4 GALNS-212ENST00000568613 1804 ntTSL 213.65□□□□□ -0.223e-9■■■■■ 79.1
WDR3Q9UNX4 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.293e-9■■■■■ 79.1
WDR3Q9UNX4 CKB-205ENST00000553878 856 ntTSL 230.89■■■□□ 2.547e-8■■■■■ 73.4
WDR3Q9UNX4 CKB-206ENST00000553994 746 ntTSL 230.89■■■□□ 2.547e-8■■■■■ 73.4
WDR3Q9UNX4 CKB-208ENST00000554426 775 ntTSL 527.6■■■□□ 2.017e-8■■■■■ 73.4
WDR3Q9UNX4 CKB-214ENST00000555770 816 ntTSL 427.55■■■□□ 27e-8■■■■■ 73.4
WDR3Q9UNX4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.537e-8■■■■■ 73.4
WDR3Q9UNX4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.087e-8■■■■■ 73.4
WDR3Q9UNX4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.8■□□□□ 0.927e-8■■■■■ 73.4
WDR3Q9UNX4 CKB-209ENST00000554705 803 ntTSL 220.27■□□□□ 0.847e-8■■■■■ 73.4
WDR3Q9UNX4 CKB-213ENST00000555659 755 ntTSL 219.81■□□□□ 0.767e-8■■■■■ 73.4
WDR3Q9UNX4 CKB-204ENST00000553652 1239 ntTSL 518.75■□□□□ 0.597e-8■■■■■ 73.4
WDR3Q9UNX4 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.98□□□□□ -0.017e-8■■■■■ 73.4
WDR3Q9UNX4 CKB-216ENST00000557530 523 ntTSL 414.11□□□□□ -0.157e-8■■■■■ 73.4
WDR3Q9UNX4 ZC3H3-201ENST00000262577 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.297e-8■■■■■ 73.4
WDR3Q9UNX4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.23■■□□□ 1.793e-8■■■■■ 71.2
WDR3Q9UNX4 GMDS-AS1-203ENST00000524770 565 ntTSL 321.16■□□□□ 0.983e-8■■■■■ 71.2
WDR3Q9UNX4 GMDS-AS1-209ENST00000532124 629 ntTSL 421.16■□□□□ 0.983e-8■■■■■ 71.2
WDR3Q9UNX4 SFMBT1-204ENST00000482396 850 ntTSL 220.89■□□□□ 0.933e-8■■■■■ 71.2
WDR3Q9UNX4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.56■□□□□ 0.883e-8■■■■■ 71.2
WDR3Q9UNX4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.73e-8■■■■■ 71.2
WDR3Q9UNX4 KAZN-206ENST00000491547 5592 ntTSL 219.08■□□□□ 0.653e-8■■■■■ 71.2
WDR3Q9UNX4 GMDS-AS1-206ENST00000530346 594 ntTSL 419.04■□□□□ 0.643e-8■■■■■ 71.2
WDR3Q9UNX4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.623e-8■■■■■ 71.2
WDR3Q9UNX4 SFMBT1-202ENST00000470575 698 ntTSL 218.88■□□□□ 0.613e-8■■■■■ 71.2
WDR3Q9UNX4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.56■□□□□ 0.563e-8■■■■■ 71.2
WDR3Q9UNX4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.55■□□□□ 0.563e-8■■■■■ 71.2
WDR3Q9UNX4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.43■□□□□ 0.543e-8■■■■■ 71.2
WDR3Q9UNX4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.62■□□□□ 0.413e-8■■■■■ 71.2
WDR3Q9UNX4 TRMT61A-201ENST00000299202 2827 ntTSL 1 (best)17.59■□□□□ 0.413e-8■■■■■ 71.2
WDR3Q9UNX4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.56■□□□□ 0.43e-8■■■■■ 71.2
WDR3Q9UNX4 PMF1-206ENST00000606952 1275 ntTSL 1 (best)17.56■□□□□ 0.43e-8■■■■■ 71.2
WDR3Q9UNX4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.43e-8■■■■■ 71.2
WDR3Q9UNX4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.44■□□□□ 0.383e-8■■■■■ 71.2
WDR3Q9UNX4 NEK7-205ENST00000442588 519 ntTSL 517.41■□□□□ 0.383e-8■■■■■ 71.2
WDR3Q9UNX4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.353e-8■■■■■ 71.2
WDR3Q9UNX4 SFMBT1-203ENST00000474837 579 ntTSL 416.84■□□□□ 0.293e-8■■■■■ 71.2
WDR3Q9UNX4 PMF1-205ENST00000497069 837 ntTSL 316.76■□□□□ 0.273e-8■■■■■ 71.2
WDR3Q9UNX4 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.063e-8■■■■■ 71.2
WDR3Q9UNX4 BROX-206ENST00000496267 782 ntTSL 1 (best)14.96□□□□□ -0.013e-8■■■■■ 71.2
WDR3Q9UNX4 SFMBT1-205ENST00000483069 617 ntTSL 414.87□□□□□ -0.033e-8■■■■■ 71.2
WDR3Q9UNX4 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.84□□□□□ -0.033e-8■■■■■ 71.2
WDR3Q9UNX4 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.71□□□□□ -0.053e-8■■■■■ 71.2
WDR3Q9UNX4 SFMBT1-208ENST00000497586 699 ntTSL 414.45□□□□□ -0.13e-8■■■■■ 71.2
WDR3Q9UNX4 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.113e-8■■■■■ 71.2
WDR3Q9UNX4 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.153e-8■■■■■ 71.2
Retrieved 100 of 1,750 protein–RNA pairs in 160.6 ms