Protein–RNA interactions for Protein: Q9UNX4

WDR3, WD repeat-containing protein 3, humanhuman

Known RBP eCLIP

Length 943 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR3Q9UNX4 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC13.45□□□□□ -0.268e-7■■■■■ 338
WDR3Q9UNX4 SNORD3B-1-201ENST00000577988 758 ntBASIC14.67□□□□□ -0.063e-25■■■■■ 327.1
WDR3Q9UNX4 SNORD3B-1-203ENST00000631292 217 nt11.87□□□□□ -0.513e-25■■■■■ 327.1
WDR3Q9UNX4 SNORD3B-1-202ENST00000617128 218 nt11.7□□□□□ -0.543e-25■■■■■ 327.1
WDR3Q9UNX4 AC007952.4-201ENST00000573866 637 ntBASIC14.61□□□□□ -0.071e-323■■■■■ 281.4
WDR3Q9UNX4 SNORD3D-202ENST00000630092 217 ntBASIC11.87□□□□□ -0.511e-323■■■■■ 281.4
WDR3Q9UNX4 SNORD3D-201ENST00000619178 218 ntBASIC11.7□□□□□ -0.541e-323■■■■■ 281.4
WDR3Q9UNX4 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.685e-7■■■■■ 141.2
WDR3Q9UNX4 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.29□□□□□ -1.245e-7■■■■■ 141.2
WDR3Q9UNX4 TNKS-203ENST00000517770 574 ntTSL 45.73□□□□□ -1.495e-7■■■■■ 141.2
WDR3Q9UNX4 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC13.28□□□□□ -0.281e-12■■■■■ 119.3
WDR3Q9UNX4 TSPEAR-AS2-203ENST00000465978 345 ntTSL 512.85□□□□□ -0.351e-12■■■■■ 119.3
WDR3Q9UNX4 UBE2H-208ENST00000490974 572 ntTSL 523.95■■□□□ 1.426e-12■■■■■ 102.8
WDR3Q9UNX4 UBE2H-203ENST00000472396 758 ntTSL 522.64■■□□□ 1.216e-12■■■■■ 102.8
WDR3Q9UNX4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.856e-12■■■■■ 102.8
WDR3Q9UNX4 SNORD3C-201ENST00000580533 581 ntBASIC12.45□□□□□ -0.421e-323■■■■■ 97.5
WDR3Q9UNX4 SNORD3C-203ENST00000625845 217 nt11.87□□□□□ -0.511e-323■■■■■ 97.5
WDR3Q9UNX4 SNORD3C-202ENST00000620446 218 nt11.7□□□□□ -0.541e-323■■■■■ 97.5
WDR3Q9UNX4 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC13.45□□□□□ -0.268e-8■■■■■ 92.8
WDR3Q9UNX4 PHF19-213ENST00000487555 1092 ntTSL 1 (best)15.6■□□□□ 0.098e-10■■■■■ 91.8
WDR3Q9UNX4 PHF19-208ENST00000462229 550 ntTSL 214.7□□□□□ -0.068e-10■■■■■ 91.8
WDR3Q9UNX4 THRA-205ENST00000577288 581 ntTSL 426.88■■□□□ 1.894e-10■■■■■ 87
WDR3Q9UNX4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.84■■□□□ 1.894e-10■■■■■ 87
WDR3Q9UNX4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.59■■□□□ 1.854e-10■■■■■ 87
WDR3Q9UNX4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.824e-10■■■■■ 87
WDR3Q9UNX4 THRA-210ENST00000585047 574 ntTSL 426.02■■□□□ 1.764e-10■■■■■ 87
WDR3Q9UNX4 THRA-208ENST00000578218 907 ntTSL 425.96■■□□□ 1.754e-10■■■■■ 87
WDR3Q9UNX4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.17■■□□□ 1.464e-10■■■■■ 87
WDR3Q9UNX4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.91■■□□□ 1.424e-10■■■■■ 87
WDR3Q9UNX4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.79■■□□□ 1.44e-10■■■■■ 87
WDR3Q9UNX4 APC-209ENST00000509732 524 ntTSL 422.49■■□□□ 1.194e-10■■■■■ 87
WDR3Q9UNX4 APC-205ENST00000505350 573 ntTSL 322.49■■□□□ 1.194e-10■■■■■ 87
WDR3Q9UNX4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.854e-10■■■■■ 87
WDR3Q9UNX4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.674e-10■■■■■ 87
WDR3Q9UNX4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.594e-10■■■■■ 87
WDR3Q9UNX4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.274e-10■■■■■ 87
WDR3Q9UNX4 APC-206ENST00000507379 3602 ntTSL 215.3■□□□□ 0.044e-10■■■■■ 87
WDR3Q9UNX4 NCOR2-207ENST00000420698 1752 ntTSL 216.62■□□□□ 0.254e-8■■■■■ 82.6
WDR3Q9UNX4 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.064e-8■■■■■ 82.6
WDR3Q9UNX4 NCOR2-212ENST00000448008 735 ntTSL 514.73□□□□□ -0.054e-8■■■■■ 82.6
WDR3Q9UNX4 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.144e-8■■■■■ 82.6
WDR3Q9UNX4 NCOR2-215ENST00000458234 4675 ntAPPRIS ALT2 TSL 1 (best)14.12□□□□□ -0.154e-8■■■■■ 82.6
WDR3Q9UNX4 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.224e-8■■■■■ 82.6
WDR3Q9UNX4 NCOR2-224ENST00000542927 828 ntTSL 313.1□□□□□ -0.314e-8■■■■■ 82.6
WDR3Q9UNX4 HELZ2-201ENST00000370082 1827 ntTSL 224.24■■□□□ 1.473e-9■■■■■ 79.1
WDR3Q9UNX4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.963e-9■■■■■ 79.1
WDR3Q9UNX4 PLEKHA2-203ENST00000519640 565 ntTSL 520.28■□□□□ 0.843e-9■■■■■ 79.1
WDR3Q9UNX4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.95■□□□□ 0.783e-9■■■■■ 79.1
WDR3Q9UNX4 HELZ2-206ENST00000479540 3079 ntTSL 1 (best)18.52■□□□□ 0.553e-9■■■■■ 79.1
WDR3Q9UNX4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.49■□□□□ 0.393e-9■■■■■ 79.1
WDR3Q9UNX4 GALNS-203ENST00000562593 5682 ntTSL 1 (best)17.27■□□□□ 0.353e-9■■■■■ 79.1
WDR3Q9UNX4 GALNS-209ENST00000567525 1953 ntTSL 215.38■□□□□ 0.053e-9■■■■■ 79.1
WDR3Q9UNX4 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.023e-9■■■■■ 79.1
WDR3Q9UNX4 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC13.71□□□□□ -0.213e-9■■■■■ 79.1
WDR3Q9UNX4 GALNS-212ENST00000568613 1804 ntTSL 213.65□□□□□ -0.223e-9■■■■■ 79.1
WDR3Q9UNX4 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.293e-9■■■■■ 79.1
WDR3Q9UNX4 CKB-205ENST00000553878 856 ntTSL 230.89■■■□□ 2.547e-8■■■■■ 73.4
WDR3Q9UNX4 CKB-206ENST00000553994 746 ntTSL 230.89■■■□□ 2.547e-8■■■■■ 73.4
WDR3Q9UNX4 CKB-208ENST00000554426 775 ntTSL 527.6■■■□□ 2.017e-8■■■■■ 73.4
WDR3Q9UNX4 CKB-214ENST00000555770 816 ntTSL 427.55■■■□□ 27e-8■■■■■ 73.4
WDR3Q9UNX4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.537e-8■■■■■ 73.4
WDR3Q9UNX4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.087e-8■■■■■ 73.4
WDR3Q9UNX4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.8■□□□□ 0.927e-8■■■■■ 73.4
WDR3Q9UNX4 CKB-209ENST00000554705 803 ntTSL 220.27■□□□□ 0.847e-8■■■■■ 73.4
WDR3Q9UNX4 CKB-213ENST00000555659 755 ntTSL 219.81■□□□□ 0.767e-8■■■■■ 73.4
WDR3Q9UNX4 CKB-204ENST00000553652 1239 ntTSL 518.75■□□□□ 0.597e-8■■■■■ 73.4
WDR3Q9UNX4 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.98□□□□□ -0.017e-8■■■■■ 73.4
WDR3Q9UNX4 CKB-216ENST00000557530 523 ntTSL 414.11□□□□□ -0.157e-8■■■■■ 73.4
WDR3Q9UNX4 ZC3H3-201ENST00000262577 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.297e-8■■■■■ 73.4
WDR3Q9UNX4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.23■■□□□ 1.793e-8■■■■■ 71.2
WDR3Q9UNX4 GMDS-AS1-203ENST00000524770 565 ntTSL 321.16■□□□□ 0.983e-8■■■■■ 71.2
WDR3Q9UNX4 GMDS-AS1-209ENST00000532124 629 ntTSL 421.16■□□□□ 0.983e-8■■■■■ 71.2
WDR3Q9UNX4 SFMBT1-204ENST00000482396 850 ntTSL 220.89■□□□□ 0.933e-8■■■■■ 71.2
WDR3Q9UNX4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.56■□□□□ 0.883e-8■■■■■ 71.2
WDR3Q9UNX4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.73e-8■■■■■ 71.2
WDR3Q9UNX4 KAZN-206ENST00000491547 5592 ntTSL 219.08■□□□□ 0.653e-8■■■■■ 71.2
WDR3Q9UNX4 GMDS-AS1-206ENST00000530346 594 ntTSL 419.04■□□□□ 0.643e-8■■■■■ 71.2
WDR3Q9UNX4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.623e-8■■■■■ 71.2
WDR3Q9UNX4 SFMBT1-202ENST00000470575 698 ntTSL 218.88■□□□□ 0.613e-8■■■■■ 71.2
WDR3Q9UNX4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.56■□□□□ 0.563e-8■■■■■ 71.2
WDR3Q9UNX4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.55■□□□□ 0.563e-8■■■■■ 71.2
WDR3Q9UNX4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.43■□□□□ 0.543e-8■■■■■ 71.2
WDR3Q9UNX4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.62■□□□□ 0.413e-8■■■■■ 71.2
WDR3Q9UNX4 TRMT61A-201ENST00000299202 2827 ntTSL 1 (best)17.59■□□□□ 0.413e-8■■■■■ 71.2
WDR3Q9UNX4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.56■□□□□ 0.43e-8■■■■■ 71.2
WDR3Q9UNX4 PMF1-206ENST00000606952 1275 ntTSL 1 (best)17.56■□□□□ 0.43e-8■■■■■ 71.2
WDR3Q9UNX4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.43e-8■■■■■ 71.2
WDR3Q9UNX4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.44■□□□□ 0.383e-8■■■■■ 71.2
WDR3Q9UNX4 NEK7-205ENST00000442588 519 ntTSL 517.41■□□□□ 0.383e-8■■■■■ 71.2
WDR3Q9UNX4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.353e-8■■■■■ 71.2
WDR3Q9UNX4 SFMBT1-203ENST00000474837 579 ntTSL 416.84■□□□□ 0.293e-8■■■■■ 71.2
WDR3Q9UNX4 PMF1-205ENST00000497069 837 ntTSL 316.76■□□□□ 0.273e-8■■■■■ 71.2
WDR3Q9UNX4 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.063e-8■■■■■ 71.2
WDR3Q9UNX4 BROX-206ENST00000496267 782 ntTSL 1 (best)14.96□□□□□ -0.013e-8■■■■■ 71.2
WDR3Q9UNX4 SFMBT1-205ENST00000483069 617 ntTSL 414.87□□□□□ -0.033e-8■■■■■ 71.2
WDR3Q9UNX4 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.84□□□□□ -0.033e-8■■■■■ 71.2
WDR3Q9UNX4 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.71□□□□□ -0.053e-8■■■■■ 71.2
WDR3Q9UNX4 SFMBT1-208ENST00000497586 699 ntTSL 414.45□□□□□ -0.13e-8■■■■■ 71.2
WDR3Q9UNX4 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.113e-8■■■■■ 71.2
WDR3Q9UNX4 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.153e-8■■■■■ 71.2
Retrieved 100 of 1,750 protein–RNA pairs in 24 ms