Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC15.15■□□□□ 0.023e-27■■■■■ 650.4
XRCC6P12956 SNORD3B-1-201ENST00000577988 758 ntBASIC15.59■□□□□ 0.092e-54■■■■■ 248.2
XRCC6P12956 SNORD3B-1-203ENST00000631292 217 nt12.52□□□□□ -0.412e-54■■■■■ 248.2
XRCC6P12956 SNORD3B-1-202ENST00000617128 218 nt12.36□□□□□ -0.432e-54■■■■■ 248.2
XRCC6P12956 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC15.15■□□□□ 0.025e-9■■■■■ 103.3
XRCC6P12956 PAMR1-208ENST00000621476 2842 ntTSL 2 BASIC14.03□□□□□ -0.161e-10■■■■■ 94.8
XRCC6P12956 BCR-207ENST00000463770 168 ntTSL 1 (best)16.51■□□□□ 0.231e-35■■■■■ 93.9
XRCC6P12956 BCR-214ENST00000487679 231 ntTSL 1 (best)9.18□□□□□ -0.941e-35■■■■■ 93.9
XRCC6P12956 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.141e-13■■■■■ 82.9
XRCC6P12956 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.921e-13■■■■■ 82.9
XRCC6P12956 ERCC1-204ENST00000423698 3119 ntTSL 2 BASIC14.82□□□□□ -0.044e-15■■■■■ 82
XRCC6P12956 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.213e-14■■■■■ 80.9
XRCC6P12956 BLOC1S6-217ENST00000568597 592 ntTSL 222.62■■□□□ 1.213e-14■■■■■ 80.9
XRCC6P12956 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.46■□□□□ 0.713e-14■■■■■ 80.9
XRCC6P12956 BLOC1S6-219ENST00000568963 480 ntTSL 419.46■□□□□ 0.713e-14■■■■■ 80.9
XRCC6P12956 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.41■□□□□ 0.73e-14■■■■■ 80.9
XRCC6P12956 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.82■□□□□ 0.443e-14■■■■■ 80.9
XRCC6P12956 BLOC1S6-215ENST00000567523 1839 ntTSL 217.74■□□□□ 0.433e-14■■■■■ 80.9
XRCC6P12956 BLOC1S6-220ENST00000569076 557 ntTSL 416.84■□□□□ 0.293e-14■■■■■ 80.9
XRCC6P12956 BLOC1S6-211ENST00000566184 493 ntTSL 415.32■□□□□ 0.043e-14■■■■■ 80.9
XRCC6P12956 BLOC1S6-216ENST00000567740 1051 ntTSL 213.14□□□□□ -0.313e-14■■■■■ 80.9
XRCC6P12956 BLOC1S6-201ENST00000220531 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.63e-14■■■■■ 80.9
XRCC6P12956 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC7.32□□□□□ -1.243e-14■■■■■ 80.9
XRCC6P12956 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.615e-15■■■■■ 80.1
XRCC6P12956 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.435e-15■■■■■ 80.1
XRCC6P12956 ATG9A-220ENST00000475339 812 ntTSL 215.25■□□□□ 0.035e-15■■■■■ 80.1
XRCC6P12956 ATG9A-203ENST00000409033 3701 ntTSL 1 (best)14.96□□□□□ -0.015e-15■■■■■ 80.1
XRCC6P12956 ATG9A-202ENST00000396761 3799 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.195e-15■■■■■ 80.1
XRCC6P12956 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.483e-14■■■■■ 75.4
XRCC6P12956 DECR2-216ENST00000633348 762 ntTSL 323.23■■□□□ 1.313e-14■■■■■ 75.4
XRCC6P12956 DECR2-217ENST00000633923 509 ntTSL 321.5■■□□□ 1.033e-14■■■■■ 75.4
XRCC6P12956 DECR2-206ENST00000445291 1078 ntTSL 521.32■■□□□ 13e-14■■■■■ 75.4
XRCC6P12956 DECR2-204ENST00000437024 1738 ntTSL 220.95■□□□□ 0.943e-14■■■■■ 75.4
XRCC6P12956 DECR2-205ENST00000439661 1618 ntTSL 220.94■□□□□ 0.943e-14■■■■■ 75.4
XRCC6P12956 NME4-205ENST00000444498 1111 ntTSL 320.91■□□□□ 0.943e-14■■■■■ 75.4
XRCC6P12956 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.01■□□□□ 0.793e-14■■■■■ 75.4
XRCC6P12956 DECR2-210ENST00000465166 702 ntTSL 218.38■□□□□ 0.533e-14■■■■■ 75.4
XRCC6P12956 DECR2-209ENST00000461947 1017 ntTSL 517.52■□□□□ 0.43e-14■■■■■ 75.4
XRCC6P12956 DECR2-215ENST00000633025 561 ntTSL 516.17■□□□□ 0.183e-14■■■■■ 75.4
XRCC6P12956 DECR2-214ENST00000632744 247 ntTSL 55.7□□□□□ -1.53e-14■■■■■ 75.4
XRCC6P12956 ZCCHC7-203ENST00000461038 2793 ntTSL 1 (best)19.71■□□□□ 0.754e-15■■■■■ 75.3
XRCC6P12956 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.54e-15■■■■■ 75.3
XRCC6P12956 ZCCHC7-206ENST00000488607 884 ntTSL 26.55□□□□□ -1.364e-15■■■■■ 75.3
XRCC6P12956 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.654e-15■■■■■ 75.3
XRCC6P12956 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.633e-13■■■■■ 72.3
XRCC6P12956 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.563e-13■■■■■ 72.3
XRCC6P12956 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.34□□□□□ -1.873e-13■■■■■ 72.3
XRCC6P12956 RYR2-202ENST00000366574 16562 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.462e-15■■■■■ 71.3
XRCC6P12956 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.272e-15■■■■■ 71.3
XRCC6P12956 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.263e-12■■■■■ 66.7
XRCC6P12956 INTS13-202ENST00000536232 460 ntTSL 34.99□□□□□ -1.613e-12■■■■■ 66.7
XRCC6P12956 BCR-212ENST00000479188 658 ntTSL 414.96□□□□□ -0.013e-8■■■■■ 65.3
XRCC6P12956 POLR2A-209ENST00000617998 6751 ntTSL 1 (best)12.28□□□□□ -0.441e-10■■■■■ 63.4
XRCC6P12956 VTRNA1-1-201ENST00000363120 99 ntBASIC3.18□□□□□ -1.93e-39■■■■■ 63.2
XRCC6P12956 NR2F2-AS1-202ENST00000557863 515 ntTSL 317.87■□□□□ 0.451e-57■■■■■ 61.5
XRCC6P12956 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC29.93■■■□□ 2.381e-7■■■■■ 61.2
XRCC6P12956 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC29.6■■■□□ 2.331e-7■■■■■ 61.2
XRCC6P12956 CLK2-205ENST00000476983 1885 ntTSL 1 (best)22.09■■□□□ 1.131e-7■■■■■ 61.2
XRCC6P12956 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.781e-7■■■■■ 61.2
XRCC6P12956 CLK2-207ENST00000497188 2702 ntTSL 212.98□□□□□ -0.331e-7■■■■■ 61.2
XRCC6P12956 CLK2-204ENST00000471047 701 ntTSL 310.97□□□□□ -0.651e-7■■■■■ 61.2
XRCC6P12956 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC13.21□□□□□ -0.291e-57■■■■■ 60.5
XRCC6P12956 NR2F2-AS1-201ENST00000502125 1930 ntTSL 2 BASIC12.07□□□□□ -0.481e-57■■■■■ 60.5
XRCC6P12956 NR2F2-AS1-203ENST00000558929 574 ntTSL 5 BASIC10.5□□□□□ -0.731e-57■■■■■ 60.5
XRCC6P12956 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC8.71□□□□□ -1.021e-57■■■■■ 60.5
XRCC6P12956 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.83□□□□□ -1.641e-57■■■■■ 60.5
XRCC6P12956 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.92e-10■■■■■ 57.5
XRCC6P12956 SNORD1A-201ENST00000364968 72 ntBASIC1.72□□□□□ -2.138e-19■■■■■ 57
XRCC6P12956 ATG9A-215ENST00000446716 5245 ntTSL 219.77■□□□□ 0.758e-7■■■■■ 56.5
XRCC6P12956 UBE2I-216ENST00000567383 538 ntTSL 419.25■□□□□ 0.671e-10■■■■■ 56.5
XRCC6P12956 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.825e-7■■■■■ 55.3
XRCC6P12956 BRD2-213ENST00000495733 3404 ntTSL 219.17■□□□□ 0.665e-7■■■■■ 55.3
XRCC6P12956 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.475e-7■■■■■ 55.3
XRCC6P12956 BRD2-219ENST00000607833 2338 ntAPPRIS ALT2 TSL 1 (best)17.1■□□□□ 0.335e-7■■■■■ 55.3
XRCC6P12956 BRD2-212ENST00000482914 4834 ntTSL 1 (best)16.85■□□□□ 0.295e-7■■■■■ 55.3
XRCC6P12956 BRD2-206ENST00000456339 887 ntTSL 416.68■□□□□ 0.265e-7■■■■■ 55.3
XRCC6P12956 BRD2-205ENST00000449085 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.055e-7■■■■■ 55.3
XRCC6P12956 BRD2-204ENST00000449025 3210 ntAPPRIS ALT2 TSL 1 (best)14.74□□□□□ -0.055e-7■■■■■ 55.3
XRCC6P12956 BRD2-203ENST00000395287 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.445e-7■■■■■ 55.3
XRCC6P12956 DCAF6-206ENST00000455334 796 ntTSL 521.39■■□□□ 1.016e-12■■■■■ 55.2
XRCC6P12956 DCAF6-205ENST00000450548 724 ntTSL 320.45■□□□□ 0.866e-12■■■■■ 55.2
XRCC6P12956 DCAF6-209ENST00000470919 827 ntTSL 25.29□□□□□ -1.566e-12■■■■■ 55.2
XRCC6P12956 TAF1D-205ENST00000526015 1735 ntTSL 1 (best)22.07■■□□□ 1.123e-9■■■■■ 54.6
XRCC6P12956 TAF1D-201ENST00000323981 2540 ntTSL 217.25■□□□□ 0.353e-9■■■■■ 54.6
XRCC6P12956 TAF1D-204ENST00000525928 1710 ntTSL 27.83□□□□□ -1.163e-9■■■■■ 54.6
XRCC6P12956 TAF1D-222ENST00000546088 1728 ntTSL 37.11□□□□□ -1.273e-9■■■■■ 54.6
XRCC6P12956 TAF1D-210ENST00000529435 1011 ntTSL 56.3□□□□□ -1.43e-9■■■■■ 54.6
XRCC6P12956 TAF1D-215ENST00000530769 4358 ntTSL 26.2□□□□□ -1.423e-9■■■■■ 54.6
XRCC6P12956 TAF1D-219ENST00000534079 656 ntTSL 26.19□□□□□ -1.423e-9■■■■■ 54.6
XRCC6P12956 TAF1D-213ENST00000529900 1066 ntTSL 24.96□□□□□ -1.623e-9■■■■■ 54.6
XRCC6P12956 TAF1D-202ENST00000393259 547 ntTSL 34.9□□□□□ -1.633e-9■■■■■ 54.6
XRCC6P12956 TAF1D-221ENST00000540232 483 ntTSL 34.59□□□□□ -1.673e-9■■■■■ 54.6
XRCC6P12956 EIF4G1-224ENST00000444861 2384 ntTSL 1 (best)28.37■■■□□ 2.135e-9■■■■■ 54.4
XRCC6P12956 EIF4G1-226ENST00000450424 2658 ntTSL 523.26■■□□□ 1.315e-9■■■■■ 54.4
XRCC6P12956 EIF4G1-210ENST00000421110 2755 ntTSL 520.51■□□□□ 0.875e-9■■■■■ 54.4
XRCC6P12956 EIF4G1-213ENST00000426123 2907 ntTSL 220.4■□□□□ 0.865e-9■■■■■ 54.4
XRCC6P12956 EIF4G1-208ENST00000413967 2808 ntTSL 219.29■□□□□ 0.685e-9■■■■■ 54.4
XRCC6P12956 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19.16■□□□□ 0.665e-9■■■■■ 54.4
XRCC6P12956 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.585e-9■■■■■ 54.4
XRCC6P12956 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18.05■□□□□ 0.485e-9■■■■■ 54.4
Retrieved 100 of 6,788 protein–RNA pairs in 32.2 ms