Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 FOXRED1-216ENST00000533839 559 ntTSL 46.98□□□□□ -1.298e-9■■■■■ 124.4
EWSR1Q01844 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.27□□□□□ -0.134e-18■■■■■ 97
EWSR1Q01844 OAZ1-209ENST00000592787 857 ntTSL 212.66□□□□□ -0.386e-20■■■■■ 94.8
EWSR1Q01844 ULK1-204ENST00000540647 1211 ntTSL 214.54□□□□□ -0.081e-7■■■■■ 92.6
EWSR1Q01844 OAZ1-210ENST00000593012 1357 ntTSL 215.03■□□□□ -01e-8■■■■■ 88.7
EWSR1Q01844 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.131e-8■■■■■ 88.7
EWSR1Q01844 OAZ1-201ENST00000581150 1131 ntTSL 513□□□□□ -0.331e-8■■■■■ 88.7
EWSR1Q01844 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.41e-8■■■■■ 88.7
EWSR1Q01844 OAZ1-207ENST00000590943 1012 ntTSL 212.03□□□□□ -0.481e-8■■■■■ 88.7
EWSR1Q01844 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.33■□□□□ 0.853e-8■■■■■ 86
EWSR1Q01844 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.693e-8■■■■■ 86
EWSR1Q01844 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.29■□□□□ 0.23e-8■■■■■ 86
EWSR1Q01844 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.98□□□□□ -0.173e-8■■■■■ 86
EWSR1Q01844 FOXRED1-207ENST00000527004 1760 ntTSL 513.2□□□□□ -0.31e-8■■■■■ 83.9
EWSR1Q01844 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.341e-8■■■■■ 83.9
EWSR1Q01844 FOXRED1-203ENST00000525083 1228 ntTSL 212.85□□□□□ -0.351e-8■■■■■ 83.9
EWSR1Q01844 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.361e-8■■■■■ 83.9
EWSR1Q01844 FOXRED1-217ENST00000534011 1955 ntTSL 212.05□□□□□ -0.481e-8■■■■■ 83.9
EWSR1Q01844 FOXRED1-218ENST00000534315 2210 ntTSL 1 (best)11.46□□□□□ -0.571e-8■■■■■ 83.9
EWSR1Q01844 FOXRED1-204ENST00000525770 1427 ntTSL 210.76□□□□□ -0.691e-8■■■■■ 83.9
EWSR1Q01844 FOXRED1-210ENST00000530642 3045 ntTSL 27.29□□□□□ -1.241e-8■■■■■ 83.9
EWSR1Q01844 OAZ1-204ENST00000588673 780 ntTSL 314.98□□□□□ -0.011e-21■■■■■ 77.5
EWSR1Q01844 ULK1-205ENST00000541761 1262 ntTSL 211.79□□□□□ -0.524e-10■■■■■ 75.8
EWSR1Q01844 RANBP1-211ENST00000448394 688 ntTSL 210.75□□□□□ -0.693e-17■■■■■ 71.9
EWSR1Q01844 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.482e-6■■■■■ 71.7
EWSR1Q01844 MEGF6-205ENST00000485002 4705 ntTSL 513.88□□□□□ -0.192e-6■■■■■ 71.7
EWSR1Q01844 RANBP1-203ENST00000411892 584 ntTSL 210.93□□□□□ -0.664e-22■■■■■ 70.4
EWSR1Q01844 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.055e-19■■■■■ 70.1
EWSR1Q01844 C11orf24-202ENST00000527280 533 ntAPPRIS ALT2 TSL 313.45□□□□□ -0.265e-19■■■■■ 70.1
EWSR1Q01844 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.325e-19■■■■■ 70.1
EWSR1Q01844 C11orf24-205ENST00000530166 941 ntTSL 312.79□□□□□ -0.365e-19■■■■■ 70.1
EWSR1Q01844 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.63e-17■■■■■ 69.6
EWSR1Q01844 RANBP1-210ENST00000435265 1879 ntTSL 215.63■□□□□ 0.093e-17■■■■■ 69.6
EWSR1Q01844 RANBP1-207ENST00000423859 832 ntTSL 313.46□□□□□ -0.253e-17■■■■■ 69.6
EWSR1Q01844 RANBP1-205ENST00000418705 932 ntTSL 312.19□□□□□ -0.463e-17■■■■■ 69.6
EWSR1Q01844 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC11.36□□□□□ -0.593e-17■■■■■ 69.6
EWSR1Q01844 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.613e-17■■■■■ 69.6
EWSR1Q01844 OAZ1-203ENST00000586054 2832 nt18.27■□□□□ 0.522e-8■■■■■ 66.7
EWSR1Q01844 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.39□□□□□ -0.115e-18■■■■■ 66.4
EWSR1Q01844 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.23□□□□□ -0.135e-18■■■■■ 66.4
EWSR1Q01844 FAM178B-205ENST00000494172 592 ntTSL 313.23□□□□□ -0.297e-9■■■■■ 66.3
EWSR1Q01844 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.151e-8■■■■■ 65.9
EWSR1Q01844 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.881e-8■■■■■ 65.9
EWSR1Q01844 FAM178B-202ENST00000470789 722 ntTSL 1 (best)9.04□□□□□ -0.961e-8■■■■■ 65.9
EWSR1Q01844 LINC01524-202ENST00000454600 745 ntTSL 3 BASIC9.16□□□□□ -0.943e-16■■■■■ 60.9
EWSR1Q01844 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.285e-7■■■■■ 58.1
EWSR1Q01844 PNCK-208ENST00000422811 771 ntTSL 314.59□□□□□ -0.075e-15■■■■■ 55.4
EWSR1Q01844 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.19□□□□□ -0.145e-15■■■■■ 55.4
EWSR1Q01844 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.67e-12■■■■■ 54.8
EWSR1Q01844 BNIP3L-203ENST00000520077 922 ntTSL 1 (best)8.3□□□□□ -1.087e-12■■■■■ 54.8
EWSR1Q01844 BNIP3L-207ENST00000523949 875 ntTSL 37.07□□□□□ -1.287e-12■■■■■ 54.8
EWSR1Q01844 EHMT1-224ENST00000630754 709 ntTSL 314.18□□□□□ -0.148e-12■■■■■ 54.5
EWSR1Q01844 EHMT1-220ENST00000626216 558 ntTSL 310.24□□□□□ -0.778e-12■■■■■ 54.5
EWSR1Q01844 EHMT1-215ENST00000492232 710 ntTSL 38.57□□□□□ -1.048e-12■■■■■ 54.5
EWSR1Q01844 EHMT1-222ENST00000629417 882 ntTSL 38.31□□□□□ -1.088e-12■■■■■ 54.5
EWSR1Q01844 STXBP2-215ENST00000599558 385 ntTSL 212.4□□□□□ -0.423e-41■■■■■ 53.3
EWSR1Q01844 HGS-217ENST00000577012 716 ntTSL 515.78■□□□□ 0.127e-15■■■■■ 52.9
EWSR1Q01844 HGS-205ENST00000571518 644 ntTSL 214.89□□□□□ -0.037e-15■■■■■ 52.9
EWSR1Q01844 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.321e-6■■■■■ 51.7
EWSR1Q01844 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.045e-10■■■■■ 50.9
EWSR1Q01844 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.625e-10■■■■■ 50.9
EWSR1Q01844 ARHGAP35-202ENST00000595822 2977 ntTSL 210.83□□□□□ -0.685e-10■■■■■ 50.9
EWSR1Q01844 ACTN1-220ENST00000556433 1259 ntTSL 316.71■□□□□ 0.271e-13■■■■■ 50.4
EWSR1Q01844 AKT1-205ENST00000553506 2830 ntTSL 216.46■□□□□ 0.221e-13■■■■■ 50.4
EWSR1Q01844 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC11.7□□□□□ -0.541e-13■■■■■ 50.4
EWSR1Q01844 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC11.67□□□□□ -0.541e-13■■■■■ 50.4
EWSR1Q01844 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC11.43□□□□□ -0.581e-13■■■■■ 50.4
EWSR1Q01844 AKT1-210ENST00000554826 572 ntTSL 310.32□□□□□ -0.761e-13■■■■■ 50.4
EWSR1Q01844 ACTN1-201ENST00000193403 3779 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.841e-13■■■■■ 50.4
EWSR1Q01844 ACTN1-203ENST00000394419 3464 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.951e-13■■■■■ 50.4
EWSR1Q01844 ACTN1-215ENST00000555616 919 ntTSL 37.45□□□□□ -1.221e-13■■■■■ 50.4
EWSR1Q01844 ACTN1-213ENST00000554508 585 ntTSL 46.39□□□□□ -1.391e-13■■■■■ 50.4
EWSR1Q01844 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.469e-7■■■■■ 49.5
EWSR1Q01844 TRIB3-203ENST00000449710 1070 ntTSL 512.61□□□□□ -0.399e-7■■■■■ 49.5
EWSR1Q01844 TRIB3-204ENST00000615226 877 ntTSL 33.99□□□□□ -1.779e-7■■■■■ 49.5
EWSR1Q01844 LINC01597-201ENST00000380888 4472 ntTSL 5 BASIC10.12□□□□□ -0.793e-6■■■■■ 49.3
EWSR1Q01844 HMGCR-208ENST00000509431 421 ntTSL 210.29□□□□□ -0.763e-13■■■■■ 49.2
EWSR1Q01844 HMGCR-201ENST00000287936 4585 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.023e-13■■■■■ 49.2
EWSR1Q01844 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC6.41□□□□□ -1.383e-13■■■■■ 49.2
EWSR1Q01844 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.423e-13■■■■■ 49.2
EWSR1Q01844 TTYH3-206ENST00000477439 731 ntTSL 211.88□□□□□ -0.516e-13■■■■■ 48
EWSR1Q01844 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC10.81□□□□□ -0.686e-13■■■■■ 48
EWSR1Q01844 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.65■□□□□ 0.424e-11■■■■■ 47.6
EWSR1Q01844 PNCK-218ENST00000462280 704 ntTSL 314.95□□□□□ -0.024e-11■■■■■ 47.6
EWSR1Q01844 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.31□□□□□ -0.284e-11■■■■■ 47.6
EWSR1Q01844 PNCK-230ENST00000488168 976 ntTSL 312.98□□□□□ -0.334e-11■■■■■ 47.6
EWSR1Q01844 PNCK-206ENST00000418241 566 ntTSL 312.77□□□□□ -0.374e-11■■■■■ 47.6
EWSR1Q01844 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.567e-11■■■■■ 47.4
EWSR1Q01844 PNCK-227ENST00000475172 877 ntTSL 518■□□□□ 0.477e-11■■■■■ 47.4
EWSR1Q01844 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.223e-8■■■■■ 47.4
EWSR1Q01844 PNCK-221ENST00000466074 1564 ntTSL 216.09■□□□□ 0.177e-11■■■■■ 47.4
EWSR1Q01844 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.017e-11■■■■■ 47.4
EWSR1Q01844 PNCK-224ENST00000472324 2143 ntTSL 1 (best)14.98□□□□□ -0.017e-11■■■■■ 47.4
EWSR1Q01844 PNCK-220ENST00000465303 868 ntTSL 413.89□□□□□ -0.197e-11■■■■■ 47.4
EWSR1Q01844 PNCK-219ENST00000463548 783 ntTSL 513.42□□□□□ -0.267e-11■■■■■ 47.4
EWSR1Q01844 PNCK-212ENST00000434652 311 ntTSL 512.77□□□□□ -0.377e-11■■■■■ 47.4
EWSR1Q01844 PNCK-222ENST00000466638 1204 ntTSL 212.16□□□□□ -0.467e-11■■■■■ 47.4
EWSR1Q01844 PNCK-232ENST00000489536 836 ntTSL 210.71□□□□□ -0.697e-11■■■■■ 47.4
EWSR1Q01844 PNCK-214ENST00000439087 754 ntTSL 510.64□□□□□ -0.717e-11■■■■■ 47.4
EWSR1Q01844 PNCK-211ENST00000433470 717 ntTSL 510.23□□□□□ -0.777e-11■■■■■ 47.4
Retrieved 100 of 7,101 protein–RNA pairs in 29.5 ms