Protein–RNA interactions for Protein: Q8IWS0

PHF6, PHD finger protein 6, humanhuman

Known RBP eCLIP

Length 365 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF6Q8IWS0 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC13.79□□□□□ -0.25e-8■■■■■ 986.9
PHF6Q8IWS0 SNORD3B-1-201ENST00000577988 758 ntBASIC14.97□□□□□ -0.014e-58■■■■■ 510.1
PHF6Q8IWS0 SNORD3B-1-203ENST00000631292 217 nt11.52□□□□□ -0.574e-58■■■■■ 510.1
PHF6Q8IWS0 SNORD3B-1-202ENST00000617128 218 nt11.18□□□□□ -0.624e-58■■■■■ 510.1
PHF6Q8IWS0 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC13.79□□□□□ -0.29e-9■■■■■ 152.9
PHF6Q8IWS0 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC11.97□□□□□ -0.492e-7■■■■■ 140.9
PHF6Q8IWS0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.2■■□□□ 1.152e-7■■■■■ 104.6
PHF6Q8IWS0 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.182e-7■■■■■ 104.6
PHF6Q8IWS0 RILPL1-201ENST00000340724 2389 ntTSL 513.64□□□□□ -0.232e-7■■■■■ 104.6
PHF6Q8IWS0 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.65□□□□□ -1.58e-12■■■■■ 95.5
PHF6Q8IWS0 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.826e-7■■■■■ 89.1
PHF6Q8IWS0 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.78□□□□□ -1.326e-7■■■■■ 89.1
PHF6Q8IWS0 TNKS-203ENST00000517770 574 ntTSL 46.18□□□□□ -1.426e-7■■■■■ 89.1
PHF6Q8IWS0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.121e-7■■■■■ 85.8
PHF6Q8IWS0 TSPEAR-AS2-203ENST00000465978 345 ntTSL 514.37□□□□□ -0.112e-11■■■■■ 76.5
PHF6Q8IWS0 TRIM65-202ENST00000540128 886 ntTSL 323.75■■□□□ 1.394e-7■■■■■ 73.7
PHF6Q8IWS0 TRIM65-203ENST00000540812 385 ntTSL 219.23■□□□□ 0.674e-7■■■■■ 73.7
PHF6Q8IWS0 TRIM65-204ENST00000543309 865 ntTSL 217.25■□□□□ 0.354e-7■■■■■ 73.7
PHF6Q8IWS0 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.194e-7■■■■■ 73.7
PHF6Q8IWS0 CEP72-203ENST00000512038 656 ntTSL 218.96■□□□□ 0.639e-8■■■■■ 72.9
PHF6Q8IWS0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.119e-8■■■■■ 72.9
PHF6Q8IWS0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.82e-8■■■■■ 67.1
PHF6Q8IWS0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.12■□□□□ 0.492e-8■■■■■ 67.1
PHF6Q8IWS0 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.78□□□□□ -0.22e-8■■■■■ 67.1
PHF6Q8IWS0 FZR1-207ENST00000591290 1331 ntTSL 522.57■■□□□ 1.29e-10■■■■■ 66.6
PHF6Q8IWS0 FZR1-208ENST00000592214 598 ntTSL 319.93■□□□□ 0.789e-10■■■■■ 66.6
PHF6Q8IWS0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.659e-10■■■■■ 66.6
PHF6Q8IWS0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.289e-10■■■■■ 66.6
PHF6Q8IWS0 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.86■□□□□ 0.139e-10■■■■■ 66.6
PHF6Q8IWS0 LRCH4-204ENST00000476881 1675 ntTSL 221.4■■□□□ 1.027e-10■■■■■ 66.3
PHF6Q8IWS0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.29■□□□□ 0.687e-10■■■■■ 66.3
PHF6Q8IWS0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.517e-10■■■■■ 66.3
PHF6Q8IWS0 CCDC57-214ENST00000582040 330 ntTSL 316.97■□□□□ 0.317e-10■■■■■ 66.3
PHF6Q8IWS0 LRCH4-202ENST00000467201 4754 ntTSL 214.74□□□□□ -0.057e-10■■■■■ 66.3
PHF6Q8IWS0 CCDC57-207ENST00000419322 2829 ntAPPRIS ALT2 TSL 514.41□□□□□ -0.17e-10■■■■■ 66.3
PHF6Q8IWS0 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.317e-10■■■■■ 66.3
PHF6Q8IWS0 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.317e-10■■■■■ 66.3
PHF6Q8IWS0 CCDC57-205ENST00000392346 2964 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.587e-10■■■■■ 66.3
PHF6Q8IWS0 MVD-212ENST00000565842 285 ntTSL 327.78■■■□□ 2.042e-6■■■■■ 64.8
PHF6Q8IWS0 MVD-216ENST00000568709 809 ntTSL 520.79■□□□□ 0.922e-6■■■■■ 64.8
PHF6Q8IWS0 MVD-206ENST00000563170 904 ntTSL 318.12■□□□□ 0.492e-6■■■■■ 64.8
PHF6Q8IWS0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.2■■□□□ 1.625e-8■■■■■ 63.5
PHF6Q8IWS0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.615e-8■■■■■ 63.5
PHF6Q8IWS0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.74■■□□□ 1.395e-8■■■■■ 63.5
PHF6Q8IWS0 TOM1-216ENST00000492723 2568 ntTSL 215.99■□□□□ 0.152e-6■■■■■ 62.5
PHF6Q8IWS0 ABCA13-201ENST00000411975 4480 ntTSL 211.47□□□□□ -0.574e-9■■■■■ 61.2
PHF6Q8IWS0 ABCA13-205ENST00000453246 4275 ntTSL 29.43□□□□□ -0.94e-9■■■■■ 61.2
PHF6Q8IWS0 ABCA13-207ENST00000544596 7870 ntAPPRIS ALT2 TSL 1 (best)7.79□□□□□ -1.164e-9■■■■■ 61.2
PHF6Q8IWS0 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.644e-9■■■■■ 61.2
PHF6Q8IWS0 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.264e-10■■■■■ 60.5
PHF6Q8IWS0 SNORD63B-201ENST00000411005 70 ntBASIC1.77□□□□□ -2.132e-9■■■■■ 56.5
PHF6Q8IWS0 PKP3-210ENST00000533249 1111 ntTSL 327.03■■□□□ 1.922e-8■■■■■ 56.1
PHF6Q8IWS0 PKP3-206ENST00000528036 940 ntTSL 226.48■■□□□ 1.832e-8■■■■■ 56.1
PHF6Q8IWS0 PKP3-205ENST00000527442 847 ntTSL 325.06■■□□□ 1.62e-8■■■■■ 56.1
PHF6Q8IWS0 PLEKHA2-203ENST00000519640 565 ntTSL 523.53■■□□□ 1.362e-8■■■■■ 56.1
PHF6Q8IWS0 PKP3-211ENST00000534401 756 ntTSL 323.52■■□□□ 1.362e-8■■■■■ 56.1
PHF6Q8IWS0 PKP3-208ENST00000531857 687 ntTSL 420.9■□□□□ 0.942e-8■■■■■ 56.1
PHF6Q8IWS0 PKP3-207ENST00000530695 441 ntTSL 519.82■□□□□ 0.762e-8■■■■■ 56.1
PHF6Q8IWS0 NFIC-208ENST00000589537 977 ntTSL 218.84■□□□□ 0.612e-8■■■■■ 56.1
PHF6Q8IWS0 PKP3-209ENST00000533069 590 ntTSL 218.72■□□□□ 0.592e-8■■■■■ 56.1
PHF6Q8IWS0 MAEA-209ENST00000506530 5371 ntTSL 218.69■□□□□ 0.582e-8■■■■■ 56.1
PHF6Q8IWS0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.462e-8■■■■■ 56.1
PHF6Q8IWS0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.87■□□□□ 0.452e-8■■■■■ 56.1
PHF6Q8IWS0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.53■□□□□ 0.42e-8■■■■■ 56.1
PHF6Q8IWS0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.43■□□□□ 0.382e-8■■■■■ 56.1
PHF6Q8IWS0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.68■□□□□ 0.262e-8■■■■■ 56.1
PHF6Q8IWS0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.242e-8■■■■■ 56.1
PHF6Q8IWS0 MAEA-215ENST00000512289 2426 ntTSL 216.41■□□□□ 0.222e-8■■■■■ 56.1
PHF6Q8IWS0 NFIC-207ENST00000589164 435 ntTSL 314.23□□□□□ -0.132e-8■■■■■ 56.1
PHF6Q8IWS0 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC12.46□□□□□ -0.422e-8■■■■■ 56.1
PHF6Q8IWS0 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.552e-8■■■■■ 56.1
PHF6Q8IWS0 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC14.51□□□□□ -0.091e-6■■■■■ 55.4
PHF6Q8IWS0 AL669831.3-207ENST00000635509 941 ntTSL 511.64□□□□□ -0.551e-6■■■■■ 55.4
PHF6Q8IWS0 KLHDC4-202ENST00000316853 1287 ntTSL 1 (best)20.08■□□□□ 0.819e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.02■□□□□ 0.89e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-207ENST00000562155 1757 ntTSL 519.98■□□□□ 0.799e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.93■□□□□ 0.789e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.729e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.719e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-215ENST00000566349 1377 ntTSL 218.07■□□□□ 0.489e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-208ENST00000562261 1065 ntTSL 317.95■□□□□ 0.469e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-212ENST00000564396 563 ntTSL 517.15■□□□□ 0.349e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-217ENST00000566661 2232 ntTSL 516.61■□□□□ 0.259e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-214ENST00000565328 582 ntTSL 416.61■□□□□ 0.259e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-226ENST00000569747 560 ntTSL 415.92■□□□□ 0.149e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-218ENST00000567298 4572 ntTSL 514.01□□□□□ -0.179e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-213ENST00000564484 562 ntTSL 511.61□□□□□ -0.559e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-219ENST00000567513 585 ntTSL 48.22□□□□□ -1.099e-7■■■■■ 55
PHF6Q8IWS0 ASMTL-AS1-201ENST00000419737 553 ntTSL 213.88□□□□□ -0.195e-8■■■■■ 54.4
PHF6Q8IWS0 ASMTL-AS1-205ENST00000602357 435 ntTSL 2 BASIC13.56□□□□□ -0.245e-8■■■■■ 54.4
PHF6Q8IWS0 ADARB1-206ENST00000449478 704 ntTSL 517.63■□□□□ 0.412e-7■■■■■ 53.2
PHF6Q8IWS0 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC12.07□□□□□ -0.482e-7■■■■■ 53.2
PHF6Q8IWS0 ADARB1-209ENST00000464215 389 ntTSL 38.21□□□□□ -1.12e-7■■■■■ 53.2
PHF6Q8IWS0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.91■■□□□ 1.269e-8■■■■■ 52.8
PHF6Q8IWS0 TSC2-226ENST00000569930 2621 ntTSL 217.69■□□□□ 0.429e-9■■■■■ 52.5
PHF6Q8IWS0 TSC2-225ENST00000569110 1687 ntTSL 516.69■□□□□ 0.269e-9■■■■■ 52.5
PHF6Q8IWS0 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.159e-9■■■■■ 52.5
PHF6Q8IWS0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.149e-9■■■■■ 52.5
PHF6Q8IWS0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.129e-9■■■■■ 52.5
PHF6Q8IWS0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.089e-9■■■■■ 52.5
Retrieved 100 of 4,170 protein–RNA pairs in 29.3 ms