Protein–RNA interactions for Protein: Q9NQT4

EXOSC5, Exosome complex component RRP46, humanhuman

Known RBP eCLIP

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC5Q9NQT4 UGCG-205ENST00000495085 772 ntTSL 33.5□□□□□ -1.852e-7■□□□□ 9.2
EXOSC5Q9NQT4 DEK-207ENST00000515742 661 ntTSL 218.77■□□□□ 0.62e-7■□□□□ 9.2
EXOSC5Q9NQT4 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.412e-7■□□□□ 9.2
EXOSC5Q9NQT4 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.532e-7■□□□□ 9.2
EXOSC5Q9NQT4 NSD2-210ENST00000482415 3602 ntTSL 1 (best)10.98□□□□□ -0.652e-7■□□□□ 9.2
EXOSC5Q9NQT4 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.672e-7■□□□□ 9.2
EXOSC5Q9NQT4 DEK-203ENST00000503715 580 ntTSL 510.82□□□□□ -0.682e-7■□□□□ 9.2
EXOSC5Q9NQT4 NSD2-202ENST00000353275 7980 ntTSL 1 (best)10.29□□□□□ -0.762e-7■□□□□ 9.2
EXOSC5Q9NQT4 NSD2-225ENST00000514329 851 ntTSL 39.88□□□□□ -0.832e-7■□□□□ 9.2
EXOSC5Q9NQT4 NSD2-212ENST00000503128 8568 ntTSL 1 (best) BASIC9.59□□□□□ -0.872e-7■□□□□ 9.2
EXOSC5Q9NQT4 NSD2-201ENST00000312087 8050 ntTSL 1 (best)9.42□□□□□ -0.92e-7■□□□□ 9.2
EXOSC5Q9NQT4 NSD2-223ENST00000513726 648 ntTSL 39.19□□□□□ -0.942e-7■□□□□ 9.2
EXOSC5Q9NQT4 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC8.63□□□□□ -1.032e-7■□□□□ 9.2
EXOSC5Q9NQT4 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.172e-7■□□□□ 9.2
EXOSC5Q9NQT4 NSD2-221ENST00000511904 690 ntTSL 56.13□□□□□ -1.432e-7■□□□□ 9.2
EXOSC5Q9NQT4 NSD2-211ENST00000502425 421 ntTSL 35.19□□□□□ -1.582e-7■□□□□ 9.2
EXOSC5Q9NQT4 SRRM1-222ENST00000596378 2314 ntTSL 1 (best)19.76■□□□□ 0.752e-7■□□□□ 9.1
EXOSC5Q9NQT4 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.52e-7■□□□□ 9.1
EXOSC5Q9NQT4 SRRM1-214ENST00000485541 679 ntTSL 56.93□□□□□ -1.32e-7■□□□□ 9.1
EXOSC5Q9NQT4 SRRM1-204ENST00000461768 496 ntTSL 36.87□□□□□ -1.312e-7■□□□□ 9.1
EXOSC5Q9NQT4 SRRM1-220ENST00000496882 834 ntTSL 56.11□□□□□ -1.432e-7■□□□□ 9.1
EXOSC5Q9NQT4 SRRM1-212ENST00000479034 2671 ntTSL 55.81□□□□□ -1.482e-7■□□□□ 9.1
EXOSC5Q9NQT4 SRRM1-215ENST00000488317 333 ntTSL 24.83□□□□□ -1.642e-7■□□□□ 9.1
EXOSC5Q9NQT4 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.662e-7■□□□□ 9.1
EXOSC5Q9NQT4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.72e-7■□□□□ 9.1
EXOSC5Q9NQT4 SKI-202ENST00000478223 294 ntTSL 39.17□□□□□ -0.948e-7■□□□□ 9.1
EXOSC5Q9NQT4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.499e-17■□□□□ 9
EXOSC5Q9NQT4 RBM14-208ENST00000496694 562 ntTSL 55.67□□□□□ -1.54e-8■□□□□ 9
EXOSC5Q9NQT4 COL27A1-202ENST00000451716 2865 ntTSL 1 (best)10.43□□□□□ -0.742e-6■□□□□ 8.9
EXOSC5Q9NQT4 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.674e-7■□□□□ 8.9
EXOSC5Q9NQT4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.19■□□□□ 0.58e-14■□□□□ 8.9
EXOSC5Q9NQT4 CCNL1-226ENST00000631619 2457 ntTSL 515.63■□□□□ 0.098e-14■□□□□ 8.9
EXOSC5Q9NQT4 CCNL1-207ENST00000465947 793 ntTSL 514.3□□□□□ -0.128e-14■□□□□ 8.9
EXOSC5Q9NQT4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.288e-14■□□□□ 8.9
EXOSC5Q9NQT4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.2□□□□□ -0.38e-14■□□□□ 8.9
EXOSC5Q9NQT4 CCNL1-212ENST00000470121 1889 ntTSL 1 (best)12.06□□□□□ -0.488e-14■□□□□ 8.9
EXOSC5Q9NQT4 CCNL1-217ENST00000476367 1603 ntTSL 1 (best)11.79□□□□□ -0.528e-14■□□□□ 8.9
EXOSC5Q9NQT4 CCNL1-219ENST00000477127 1464 ntTSL 511.79□□□□□ -0.528e-14■□□□□ 8.9
EXOSC5Q9NQT4 CCNL1-222ENST00000479596 883 ntTSL 311.67□□□□□ -0.548e-14■□□□□ 8.9
EXOSC5Q9NQT4 CCNL1-216ENST00000475298 2362 ntTSL 1 (best)11.22□□□□□ -0.618e-14■□□□□ 8.9
EXOSC5Q9NQT4 CCNL1-209ENST00000467081 564 ntTSL 34.86□□□□□ -1.638e-14■□□□□ 8.9
EXOSC5Q9NQT4 CCNL1-205ENST00000464575 505 ntTSL 43.73□□□□□ -1.818e-14■□□□□ 8.9
EXOSC5Q9NQT4 CCNL1-220ENST00000478454 580 ntTSL 43.57□□□□□ -1.848e-14■□□□□ 8.9
EXOSC5Q9NQT4 HERC2P9-206ENST00000529624 5187 ntBASIC11.26□□□□□ -0.618e-8■□□□□ 8.9
EXOSC5Q9NQT4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.415e-6■□□□□ 8.8
EXOSC5Q9NQT4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.245e-6■□□□□ 8.8
EXOSC5Q9NQT4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.145e-6■□□□□ 8.8
EXOSC5Q9NQT4 PTMS-206ENST00000540874 501 ntTSL 214.58□□□□□ -0.085e-6■□□□□ 8.8
EXOSC5Q9NQT4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.28□□□□□ -0.285e-6■□□□□ 8.8
EXOSC5Q9NQT4 PTMS-204ENST00000540667 820 ntTSL 211.85□□□□□ -0.515e-6■□□□□ 8.8
EXOSC5Q9NQT4 SNORD91A-202ENST00000609620 191 ntBASIC6.79□□□□□ -1.325e-6■□□□□ 8.8
EXOSC5Q9NQT4 TSR1-203ENST00000575049 387 ntTSL 35.18□□□□□ -1.585e-6■□□□□ 8.8
EXOSC5Q9NQT4 SNORD91A-201ENST00000390861 95 nt0.54□□□□□ -2.325e-6■□□□□ 8.8
EXOSC5Q9NQT4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.284e-7■□□□□ 8.8
EXOSC5Q9NQT4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.311e-5■□□□□ 8.8
EXOSC5Q9NQT4 LAMB2-217ENST00000498377 1021 ntTSL 213.74□□□□□ -0.214e-7■□□□□ 8.8
EXOSC5Q9NQT4 PLOD1-204ENST00000449038 762 ntTSL 513.44□□□□□ -0.261e-5■□□□□ 8.8
EXOSC5Q9NQT4 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.344e-7■□□□□ 8.8
EXOSC5Q9NQT4 PLOD1-203ENST00000429000 886 ntTSL 512.66□□□□□ -0.381e-5■□□□□ 8.8
EXOSC5Q9NQT4 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.414e-7■□□□□ 8.8
EXOSC5Q9NQT4 PLOD1-208ENST00000485046 991 ntTSL 511.48□□□□□ -0.571e-5■□□□□ 8.8
EXOSC5Q9NQT4 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.61e-5■□□□□ 8.8
EXOSC5Q9NQT4 PLOD1-202ENST00000358133 819 ntTSL 311□□□□□ -0.651e-5■□□□□ 8.8
EXOSC5Q9NQT4 PLOD1-201ENST00000196061 2940 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.831e-5■□□□□ 8.8
EXOSC5Q9NQT4 CHD8-206ENST00000553870 679 ntTSL 57.55□□□□□ -1.28e-11■□□□□ 8.8
EXOSC5Q9NQT4 SNORD9-201ENST00000362566 104 ntBASIC2.89□□□□□ -1.958e-11■□□□□ 8.8
EXOSC5Q9NQT4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.141e-26■□□□□ 8.8
EXOSC5Q9NQT4 NOP53-207ENST00000598681 1358 ntTSL 518.09■□□□□ 0.491e-26■□□□□ 8.8
EXOSC5Q9NQT4 NOP53-204ENST00000595143 810 ntTSL 515.76■□□□□ 0.111e-26■□□□□ 8.8
EXOSC5Q9NQT4 NOP53-212ENST00000600410 4185 ntTSL 215.28■□□□□ 0.041e-26■□□□□ 8.8
EXOSC5Q9NQT4 NOP53-202ENST00000594182 303 ntTSL 312.08□□□□□ -0.481e-26■□□□□ 8.8
EXOSC5Q9NQT4 NOP53-205ENST00000597985 656 ntTSL 311.82□□□□□ -0.521e-26■□□□□ 8.8
EXOSC5Q9NQT4 SNORD23-201ENST00000408876 110 ntBASIC11.28□□□□□ -0.61e-26■□□□□ 8.8
EXOSC5Q9NQT4 NOP53-208ENST00000598959 501 ntTSL 58.27□□□□□ -1.091e-26■□□□□ 8.8
EXOSC5Q9NQT4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.793e-8■□□□□ 8.7
EXOSC5Q9NQT4 BMP2K-202ENST00000389010 2741 ntTSL 1 (best)17.57■□□□□ 0.43e-8■□□□□ 8.7
EXOSC5Q9NQT4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.153e-8■□□□□ 8.7
EXOSC5Q9NQT4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.043e-8■□□□□ 8.7
EXOSC5Q9NQT4 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.164e-11■□□□□ 8.7
EXOSC5Q9NQT4 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.194e-11■□□□□ 8.7
EXOSC5Q9NQT4 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.494e-11■□□□□ 8.7
EXOSC5Q9NQT4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.438e-7■□□□□ 8.6
EXOSC5Q9NQT4 SCAP-204ENST00000416847 683 ntTSL 315.95■□□□□ 0.141e-7■□□□□ 8.6
EXOSC5Q9NQT4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.011e-7■□□□□ 8.6
EXOSC5Q9NQT4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.058e-7■□□□□ 8.6
EXOSC5Q9NQT4 SCAP-203ENST00000416208 1222 ntTSL 514.56□□□□□ -0.081e-7■□□□□ 8.6
EXOSC5Q9NQT4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.47□□□□□ -0.098e-7■□□□□ 8.6
EXOSC5Q9NQT4 UBC-208ENST00000540700 627 ntTSL 213.64□□□□□ -0.238e-7■□□□□ 8.6
EXOSC5Q9NQT4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.44□□□□□ -0.268e-7■□□□□ 8.6
EXOSC5Q9NQT4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.38□□□□□ -0.278e-7■□□□□ 8.6
EXOSC5Q9NQT4 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.33□□□□□ -0.281e-7■□□□□ 8.6
EXOSC5Q9NQT4 SCAP-207ENST00000441517 3748 ntTSL 213.33□□□□□ -0.281e-7■□□□□ 8.6
EXOSC5Q9NQT4 SCAP-202ENST00000320017 3430 ntTSL 213.31□□□□□ -0.281e-7■□□□□ 8.6
EXOSC5Q9NQT4 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.348e-7■□□□□ 8.6
EXOSC5Q9NQT4 PPIL2-205ENST00000446951 1926 ntTSL 1 (best)12.72□□□□□ -0.378e-7■□□□□ 8.6
EXOSC5Q9NQT4 UBC-203ENST00000535859 582 ntTSL 211.67□□□□□ -0.548e-7■□□□□ 8.6
EXOSC5Q9NQT4 UBC-204ENST00000536661 624 ntTSL 211.63□□□□□ -0.558e-7■□□□□ 8.6
EXOSC5Q9NQT4 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.68e-7■□□□□ 8.6
EXOSC5Q9NQT4 SCAP-208ENST00000448217 550 ntTSL 410.03□□□□□ -0.81e-7■□□□□ 8.6
EXOSC5Q9NQT4 UBC-214ENST00000546271 559 ntTSL 49.41□□□□□ -0.98e-7■□□□□ 8.6
Retrieved 100 of 8,799 protein–RNA pairs in 35.6 ms