RNA–Protein interactions for RNA: ENST00000196061.4

PLOD1-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLOD1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD1-201ENST00000196061 NISCHQ9Y2I1 1504 aa25.7■■□□□ 1.7
PLOD1-201ENST00000196061 DCAF8L2P0C7V8 631 aa22.24■■□□□ 1.15
PLOD1-201ENST00000196061 SHROOM4Q9ULL8 1493 aa22.14■■□□□ 1.13
PLOD1-201ENST00000196061 CCDC180Q9P1Z9 1646 aa21.88■■□□□ 1.09
PLOD1-201ENST00000196061 ZCCHC6Q5VYS8 1495 aaKnown RBP21.55■■□□□ 1.04
PLOD1-201ENST00000196061 ABCC9O60706 1549 aa21.45■■□□□ 1.03
PLOD1-201ENST00000196061 SUPT5HO00267 1087 aaKnown RBP21.35■■□□□ 1.01
PLOD1-201ENST00000196061 SCRIBQ14160 1630 aa20.92■□□□□ 0.94
PLOD1-201ENST00000196061 DCAF1Q9Y4B6 1507 aa20.74■□□□□ 0.91
PLOD1-201ENST00000196061 PABPN1Q86U42 306 aaKnown RBP eCLIP20.56■□□□□ 0.88
PLOD1-201ENST00000196061 NACADO15069 1562 aa20.45■□□□□ 0.86
PLOD1-201ENST00000196061 CECR2Q9BXF3 1484 aa20.37■□□□□ 0.85
PLOD1-201ENST00000196061 RB1CC1Q8TDY2 1594 aa20.36■□□□□ 0.85
PLOD1-201ENST00000196061 MYO15BQ96JP2 1530 aa20.28■□□□□ 0.84
PLOD1-201ENST00000196061 RSF1Q96T23 1441 aaPredicted RBP20.2■□□□□ 0.82
PLOD1-201ENST00000196061 UNC13AQ9UPW8 1703 aa20.18■□□□□ 0.82
PLOD1-201ENST00000196061 CHIC1Q5VXU3 224 aa20.15■□□□□ 0.82
PLOD1-201ENST00000196061 MROH2BQ7Z745 1585 aa20.13■□□□□ 0.81
PLOD1-201ENST00000196061 EHMT2Q96KQ7 1210 aa20.04■□□□□ 0.8
PLOD1-201ENST00000196061 WIZO95785 1651 aa20.02■□□□□ 0.8
PLOD1-201ENST00000196061 BICRAQ9NZM4 1560 aa19.94■□□□□ 0.78
PLOD1-201ENST00000196061 FAM9AQ8IZU1 332 aaPredicted RBP19.89■□□□□ 0.77
PLOD1-201ENST00000196061 LOC105371045A0A1W2PR82 267 aa19.83■□□□□ 0.76
PLOD1-201ENST00000196061 BAZ1AQ9NRL2 1556 aaPredicted RBP19.72■□□□□ 0.75
PLOD1-201ENST00000196061 SMARCA4P51532 1647 aa19.71■□□□□ 0.75
PLOD1-201ENST00000196061 TRIM41Q8WV44 630 aa19.69■□□□□ 0.74
PLOD1-201ENST00000196061 CCDC88BA6NC98 1476 aa19.53■□□□□ 0.72
PLOD1-201ENST00000196061 ABCC8Q09428 1581 aa19.46■□□□□ 0.71
PLOD1-201ENST00000196061 TOP2AP11388 1531 aaKnown RBP19.44■□□□□ 0.7
PLOD1-201ENST00000196061 SMARCA2P51531 1590 aa19.41■□□□□ 0.7
PLOD1-201ENST00000196061 ATAD2BQ9ULI0 1458 aa19.41■□□□□ 0.7
PLOD1-201ENST00000196061 BAZ1BQ9UIG0 1483 aaKnown RBP19.36■□□□□ 0.69
PLOD1-201ENST00000196061 EIF4G1Q04637 1599 aaKnown RBP19.33■□□□□ 0.69
PLOD1-201ENST00000196061 DNAJC5BQ9UF47 199 aa19.32■□□□□ 0.68
PLOD1-201ENST00000196061 PPARGC1BQ86YN6 1023 aaKnown RBP19.24■□□□□ 0.67
PLOD1-201ENST00000196061 RANGAP1P46060 587 aaPredicted RBP19.16■□□□□ 0.66
PLOD1-201ENST00000196061 RUSC2Q8N2Y8 1516 aa19.14■□□□□ 0.66
PLOD1-201ENST00000196061 TTBK1Q5TCY1 1321 aaPredicted RBP19.14■□□□□ 0.65
PLOD1-201ENST00000196061 SOGA1O94964 1423 aa19.13■□□□□ 0.65
PLOD1-201ENST00000196061 PEG3Q9GZU2 1588 aa19.12■□□□□ 0.65
PLOD1-201ENST00000196061 PCGF6Q9BYE7 350 aa19.11■□□□□ 0.65
PLOD1-201ENST00000196061 CC2D2AQ9P2K1 1620 aa19.09■□□□□ 0.65
PLOD1-201ENST00000196061 NCAPD3P42695 1498 aa19.01■□□□□ 0.63
PLOD1-201ENST00000196061 WRNQ14191 1432 aaPredicted RBP eCLIP19■□□□□ 0.63
PLOD1-201ENST00000196061 SYNJ1O43426 1573 aa18.98■□□□□ 0.63
PLOD1-201ENST00000196061 UBTFP17480 764 aaKnown RBP18.94■□□□□ 0.62
PLOD1-201ENST00000196061 NESP48681 1621 aa18.92■□□□□ 0.62
PLOD1-201ENST00000196061 HRCP23327 699 aa18.9■□□□□ 0.62
PLOD1-201ENST00000196061 HMGXB3Q12766 1538 aa18.87■□□□□ 0.61
PLOD1-201ENST00000196061 CSRNP3Q8WYN3 585 aa18.85■□□□□ 0.61
PLOD1-201ENST00000196061 CUX1P39880 1505 aa18.73■□□□□ 0.59
PLOD1-201ENST00000196061 CADPSQ9ULU8 1353 aa18.73■□□□□ 0.59
PLOD1-201ENST00000196061 CFTRP13569 1480 aa18.73■□□□□ 0.59
PLOD1-201ENST00000196061 RAPGEF2Q9Y4G8 1499 aa18.62■□□□□ 0.57
PLOD1-201ENST00000196061 FANCD2Q9BXW9 1451 aa18.61■□□□□ 0.57
PLOD1-201ENST00000196061 TOP2BQ02880 1626 aa18.61■□□□□ 0.57
PLOD1-201ENST00000196061 CEP162Q5TB80 1403 aa18.6■□□□□ 0.57
PLOD1-201ENST00000196061 RAD54L2Q9Y4B4 1467 aa18.58■□□□□ 0.56
PLOD1-201ENST00000196061 TRIM26Q12899 539 aaPredicted RBP18.54■□□□□ 0.56
PLOD1-201ENST00000196061 CUX2O14529 1486 aa18.53■□□□□ 0.56
PLOD1-201ENST00000196061 FGD5Q6ZNL6 1462 aa18.53■□□□□ 0.56
PLOD1-201ENST00000196061 P3H3Q8IVL6 736 aa18.5■□□□□ 0.55
PLOD1-201ENST00000196061 GOLGA3Q08378 1498 aa18.49■□□□□ 0.55
PLOD1-201ENST00000196061 BIVM-ERCC5R4GMW8 1640 aa18.49■□□□□ 0.55
PLOD1-201ENST00000196061 TNIKQ9UKE5 1360 aa18.46■□□□□ 0.54
PLOD1-201ENST00000196061 TDRD9Q8NDG6 1382 aaKnown RBP18.45■□□□□ 0.54
PLOD1-201ENST00000196061 CEP164Q9UPV0 1460 aa18.42■□□□□ 0.54
PLOD1-201ENST00000196061 EEA1Q15075 1411 aa18.42■□□□□ 0.54
PLOD1-201ENST00000196061 KIF27Q86VH2 1401 aa18.4■□□□□ 0.54
PLOD1-201ENST00000196061 KIF21AQ7Z4S6 1674 aa18.4■□□□□ 0.54
PLOD1-201ENST00000196061 URB2Q14146 1524 aaKnown RBP18.4■□□□□ 0.54
PLOD1-201ENST00000196061 CLIP1P30622 1438 aa18.39■□□□□ 0.53
PLOD1-201ENST00000196061 TOPBP1Q92547 1522 aa18.39■□□□□ 0.53
PLOD1-201ENST00000196061 PRDM2Q13029 1718 aa18.38■□□□□ 0.53
PLOD1-201ENST00000196061 ATP1B4Q9UN42 357 aaPredicted RBP18.37■□□□□ 0.53
PLOD1-201ENST00000196061 POLA1P09884 1462 aaPredicted RBP18.36■□□□□ 0.53
PLOD1-201ENST00000196061 IGF1RP08069 1367 aa18.35■□□□□ 0.53
PLOD1-201ENST00000196061 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.32■□□□□ 0.52
PLOD1-201ENST00000196061 KIF21BO75037 1637 aa18.3■□□□□ 0.52
PLOD1-201ENST00000196061 PRXQ9BXM0 1461 aa18.28■□□□□ 0.52
PLOD1-201ENST00000196061 CARMIL1Q5VZK9 1371 aa18.28■□□□□ 0.52
PLOD1-201ENST00000196061 PDS5BQ9NTI5 1447 aa18.28■□□□□ 0.52
PLOD1-201ENST00000196061 LAMC3Q9Y6N6 1575 aa18.27■□□□□ 0.51
PLOD1-201ENST00000196061 HNRNPUL2Q1KMD3 747 aaKnown RBP18.26■□□□□ 0.51
PLOD1-201ENST00000196061 DNMBPQ6XZF7 1577 aa18.26■□□□□ 0.51
PLOD1-201ENST00000196061 ARID3CA6NKF2 412 aa18.24■□□□□ 0.51
PLOD1-201ENST00000196061 AQRO60306 1485 aaKnown RBP eCLIP18.24■□□□□ 0.514e-7■■■■■ 29
PLOD1-201ENST00000196061 KANK4Q5T7N3 995 aaPredicted RBP18.22■□□□□ 0.51
PLOD1-201ENST00000196061 APLP2Q06481 763 aa18.21■□□□□ 0.51
PLOD1-201ENST00000196061 ERCC6Q03468 1493 aa18.21■□□□□ 0.51
PLOD1-201ENST00000196061 ARAP1Q96P48 1450 aa18.18■□□□□ 0.5
PLOD1-201ENST00000196061 FBLN2P98095 1184 aa18.18■□□□□ 0.5
PLOD1-201ENST00000196061 PELP1Q8IZL8 1130 aaKnown RBP18.18■□□□□ 0.5
PLOD1-201ENST00000196061 ITGAEP38570 1179 aa18.16■□□□□ 0.5
PLOD1-201ENST00000196061 ZNF608Q9ULD9 1512 aaPredicted RBP18.15■□□□□ 0.5
PLOD1-201ENST00000196061 VPS8Q8N3P4 1428 aa18.12■□□□□ 0.49
PLOD1-201ENST00000196061 ABCA10Q8WWZ4 1543 aa18.11■□□□□ 0.49
PLOD1-201ENST00000196061 ARHGAP35Q9NRY4 1499 aa18.1■□□□□ 0.49
PLOD1-201ENST00000196061 GAPVD1Q14C86 1478 aa18.09■□□□□ 0.49
PLOD1-201ENST00000196061 FHOD3Q2V2M9 1422 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms