RNA–Protein interactions for RNA: ENST00000470121.5

CCNL1-212, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-212ENST00000470121 NISCHQ9Y2I1 1504 aa30.71■■■□□ 2.51
CCNL1-212ENST00000470121 CCDC180Q9P1Z9 1646 aa26.53■■□□□ 1.84
CCNL1-212ENST00000470121 ZCCHC6Q5VYS8 1495 aaKnown RBP25.86■■□□□ 1.73
CCNL1-212ENST00000470121 DCAF1Q9Y4B6 1507 aa25.38■■□□□ 1.65
CCNL1-212ENST00000470121 SHROOM4Q9ULL8 1493 aa25.31■■□□□ 1.64
CCNL1-212ENST00000470121 DCAF8L2P0C7V8 631 aa25.23■■□□□ 1.63
CCNL1-212ENST00000470121 MYO15BQ96JP2 1530 aa24.94■■□□□ 1.58
CCNL1-212ENST00000470121 ABCC9O60706 1549 aa24.82■■□□□ 1.56
CCNL1-212ENST00000470121 NACADO15069 1562 aa24.66■■□□□ 1.54
CCNL1-212ENST00000470121 SUPT5HO00267 1087 aaKnown RBP24.53■■□□□ 1.52
CCNL1-212ENST00000470121 SCRIBQ14160 1630 aa24.48■■□□□ 1.51
CCNL1-212ENST00000470121 RB1CC1Q8TDY2 1594 aa24.33■■□□□ 1.49
CCNL1-212ENST00000470121 RSF1Q96T23 1441 aaPredicted RBP23.99■■□□□ 1.43
CCNL1-212ENST00000470121 UNC13AQ9UPW8 1703 aa23.9■■□□□ 1.42
CCNL1-212ENST00000470121 CECR2Q9BXF3 1484 aa23.87■■□□□ 1.41
CCNL1-212ENST00000470121 MROH2BQ7Z745 1585 aa23.76■■□□□ 1.39
CCNL1-212ENST00000470121 CHIC1Q5VXU3 224 aa23.73■■□□□ 1.39
CCNL1-212ENST00000470121 BICRAQ9NZM4 1560 aa23.68■■□□□ 1.38
CCNL1-212ENST00000470121 BAZ1AQ9NRL2 1556 aaPredicted RBP23.64■■□□□ 1.37
CCNL1-212ENST00000470121 WIZO95785 1651 aa23.57■■□□□ 1.36
CCNL1-212ENST00000470121 PABPN1Q86U42 306 aaKnown RBP eCLIP23.53■■□□□ 1.36
CCNL1-212ENST00000470121 SMARCA4P51532 1647 aa23.5■■□□□ 1.35
CCNL1-212ENST00000470121 TOP2AP11388 1531 aaKnown RBP23.3■■□□□ 1.32
CCNL1-212ENST00000470121 PEG3Q9GZU2 1588 aa23.22■■□□□ 1.31
CCNL1-212ENST00000470121 CCDC88BA6NC98 1476 aa23.12■■□□□ 1.29
CCNL1-212ENST00000470121 SMARCA2P51531 1590 aa23.12■■□□□ 1.29
CCNL1-212ENST00000470121 EIF4G1Q04637 1599 aaKnown RBP23.09■■□□□ 1.29
CCNL1-212ENST00000470121 ATAD2BQ9ULI0 1458 aa23.06■■□□□ 1.28
CCNL1-212ENST00000470121 TRIM41Q8WV44 630 aa23.03■■□□□ 1.28
CCNL1-212ENST00000470121 BAZ1BQ9UIG0 1483 aaKnown RBP22.89■■□□□ 1.26
CCNL1-212ENST00000470121 LOC105371045A0A1W2PR82 267 aa22.85■■□□□ 1.25
CCNL1-212ENST00000470121 NCAPD3P42695 1498 aa22.8■■□□□ 1.24
CCNL1-212ENST00000470121 HMGXB3Q12766 1538 aa22.75■■□□□ 1.23
CCNL1-212ENST00000470121 ABCC8Q09428 1581 aa22.72■■□□□ 1.23
CCNL1-212ENST00000470121 FAM9AQ8IZU1 332 aaPredicted RBP22.63■■□□□ 1.21
CCNL1-212ENST00000470121 WRNQ14191 1432 aaPredicted RBP eCLIP22.52■■□□□ 1.22e-6■■■■□ 22.3
CCNL1-212ENST00000470121 CC2D2AQ9P2K1 1620 aa22.46■■□□□ 1.19
CCNL1-212ENST00000470121 SYNJ1O43426 1573 aa22.43■■□□□ 1.18
CCNL1-212ENST00000470121 SOGA1O94964 1423 aa22.41■■□□□ 1.18
CCNL1-212ENST00000470121 CFTRP13569 1480 aa22.39■■□□□ 1.17
CCNL1-212ENST00000470121 EEA1Q15075 1411 aa22.38■■□□□ 1.17
CCNL1-212ENST00000470121 RUSC2Q8N2Y8 1516 aa22.33■■□□□ 1.17
CCNL1-212ENST00000470121 TOP2BQ02880 1626 aa22.3■■□□□ 1.16
CCNL1-212ENST00000470121 EHMT2Q96KQ7 1210 aa22.29■■□□□ 1.16
CCNL1-212ENST00000470121 CSRNP3Q8WYN3 585 aa22.28■■□□□ 1.16
CCNL1-212ENST00000470121 BIVM-ERCC5R4GMW8 1640 aa22.26■■□□□ 1.15
CCNL1-212ENST00000470121 CADPSQ9ULU8 1353 aa22.24■■□□□ 1.15
CCNL1-212ENST00000470121 PRDM2Q13029 1718 aa22.22■■□□□ 1.15
CCNL1-212ENST00000470121 CUX1P39880 1505 aa22.18■■□□□ 1.14
CCNL1-212ENST00000470121 PCGF6Q9BYE7 350 aa22.14■■□□□ 1.13
CCNL1-212ENST00000470121 TNIKQ9UKE5 1360 aa22.14■■□□□ 1.13
CCNL1-212ENST00000470121 GOLGA3Q08378 1498 aa22.09■■□□□ 1.13
CCNL1-212ENST00000470121 KIF21BO75037 1637 aa22.07■■□□□ 1.12
CCNL1-212ENST00000470121 TRIM26Q12899 539 aaPredicted RBP22.05■■□□□ 1.12
CCNL1-212ENST00000470121 CEP164Q9UPV0 1460 aa22.05■■□□□ 1.12
CCNL1-212ENST00000470121 CEP162Q5TB80 1403 aa22.01■■□□□ 1.11
CCNL1-212ENST00000470121 UBTFP17480 764 aaKnown RBP21.98■■□□□ 1.11
CCNL1-212ENST00000470121 FANCD2Q9BXW9 1451 aa21.97■■□□□ 1.11
CCNL1-212ENST00000470121 NESP48681 1621 aa21.93■■□□□ 1.1
CCNL1-212ENST00000470121 RAPGEF2Q9Y4G8 1499 aa21.92■■□□□ 1.1
CCNL1-212ENST00000470121 KIF27Q86VH2 1401 aa21.92■■□□□ 1.1
CCNL1-212ENST00000470121 DNAJC5BQ9UF47 199 aa21.91■■□□□ 1.1
CCNL1-212ENST00000470121 LAMC3Q9Y6N6 1575 aa21.91■■□□□ 1.1
CCNL1-212ENST00000470121 PRXQ9BXM0 1461 aa21.91■■□□□ 1.1
CCNL1-212ENST00000470121 ERICH3Q5RHP9 1530 aa21.86■■□□□ 1.09
CCNL1-212ENST00000470121 FGD5Q6ZNL6 1462 aa21.85■■□□□ 1.09
CCNL1-212ENST00000470121 HRCP23327 699 aa21.82■■□□□ 1.08
CCNL1-212ENST00000470121 DNMBPQ6XZF7 1577 aa21.82■■□□□ 1.08
CCNL1-212ENST00000470121 TOPBP1Q92547 1522 aa21.79■■□□□ 1.08
CCNL1-212ENST00000470121 CUX2O14529 1486 aa21.78■■□□□ 1.08
CCNL1-212ENST00000470121 CLIP1P30622 1438 aa21.76■■□□□ 1.07
CCNL1-212ENST00000470121 IGF1RP08069 1367 aa21.75■■□□□ 1.07
CCNL1-212ENST00000470121 PDS5BQ9NTI5 1447 aa21.74■■□□□ 1.07
CCNL1-212ENST00000470121 PPARGC1BQ86YN6 1023 aaKnown RBP21.72■■□□□ 1.07
CCNL1-212ENST00000470121 POLA1P09884 1462 aaPredicted RBP21.71■■□□□ 1.07
CCNL1-212ENST00000470121 URB2Q14146 1524 aaKnown RBP21.7■■□□□ 1.06
CCNL1-212ENST00000470121 ABCA10Q8WWZ4 1543 aa21.68■■□□□ 1.06
CCNL1-212ENST00000470121 RAD54L2Q9Y4B4 1467 aa21.67■■□□□ 1.06
CCNL1-212ENST00000470121 VPS8Q8N3P4 1428 aa21.63■■□□□ 1.05
CCNL1-212ENST00000470121 KIF21AQ7Z4S6 1674 aa21.62■■□□□ 1.05
CCNL1-212ENST00000470121 CARMIL1Q5VZK9 1371 aa21.61■■□□□ 1.05
CCNL1-212ENST00000470121 WDR97A6NE52 1622 aa21.56■■□□□ 1.04
CCNL1-212ENST00000470121 ARAP1Q96P48 1450 aa21.54■■□□□ 1.04
CCNL1-212ENST00000470121 RANGAP1P46060 587 aaPredicted RBP21.52■■□□□ 1.03
CCNL1-212ENST00000470121 ARHGAP35Q9NRY4 1499 aa21.46■■□□□ 1.03
CCNL1-212ENST00000470121 ABCA5Q8WWZ7 1642 aa21.46■■□□□ 1.03
CCNL1-212ENST00000470121 CUL7Q14999 1698 aa21.45■■□□□ 1.02
CCNL1-212ENST00000470121 TARBP1Q13395 1621 aaKnown RBP21.44■■□□□ 1.02
CCNL1-212ENST00000470121 MRC2Q9UBG0 1479 aa21.44■■□□□ 1.02
CCNL1-212ENST00000470121 TTBK1Q5TCY1 1321 aaPredicted RBP21.42■■□□□ 1.02
CCNL1-212ENST00000470121 TDRD9Q8NDG6 1382 aaKnown RBP21.41■■□□□ 1.02
CCNL1-212ENST00000470121 GAPVD1Q14C86 1478 aa21.4■■□□□ 1.02
CCNL1-212ENST00000470121 APLP2Q06481 763 aa21.37■■□□□ 1.01
CCNL1-212ENST00000470121 WDR62O43379 1518 aa21.33■■□□□ 1
CCNL1-212ENST00000470121 ZEB1P37275 1124 aaPredicted RBP21.32■■□□□ 1
CCNL1-212ENST00000470121 CTTNBP2Q8WZ74 1663 aa21.26■□□□□ 0.99
CCNL1-212ENST00000470121 IFT140Q96RY7 1462 aa21.24■□□□□ 0.99
CCNL1-212ENST00000470121 KANK4Q5T7N3 995 aaPredicted RBP21.23■□□□□ 0.99
CCNL1-212ENST00000470121 AQRO60306 1485 aaKnown RBP eCLIP21.22■□□□□ 0.993e-8■■■■■ 39.2
CCNL1-212ENST00000470121 PBRM1Q86U86 1689 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms