RNA–Protein interactions for RNA: ENST00000358133.5

PLOD1-202, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 1, humanhuman

TSL 3

Gene PLOD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD1-202ENST00000358133 NISCHQ9Y2I1 1504 aa35.16■■■■□ 3.22
PLOD1-202ENST00000358133 CCDC180Q9P1Z9 1646 aa31.53■■■□□ 2.64
PLOD1-202ENST00000358133 ABCC9O60706 1549 aa31.34■■■□□ 2.61
PLOD1-202ENST00000358133 RB1CC1Q8TDY2 1594 aa29.89■■■□□ 2.38
PLOD1-202ENST00000358133 DNAJC5BQ9UF47 199 aa29.88■■■□□ 2.37
PLOD1-202ENST00000358133 NACADO15069 1562 aa29.72■■■□□ 2.35
PLOD1-202ENST00000358133 DCAF8L2P0C7V8 631 aa29.49■■■□□ 2.31
PLOD1-202ENST00000358133 MYO15BQ96JP2 1530 aa29.36■■■□□ 2.29
PLOD1-202ENST00000358133 UNC13AQ9UPW8 1703 aa29.34■■■□□ 2.29
PLOD1-202ENST00000358133 ZCCHC6Q5VYS8 1495 aaKnown RBP29.2■■■□□ 2.26
PLOD1-202ENST00000358133 PABPN1Q86U42 306 aaKnown RBP eCLIP29.16■■■□□ 2.26
PLOD1-202ENST00000358133 BICRAQ9NZM4 1560 aa29.09■■■□□ 2.25
PLOD1-202ENST00000358133 DCAF1Q9Y4B6 1507 aa29.05■■■□□ 2.24
PLOD1-202ENST00000358133 SCRIBQ14160 1630 aa28.73■■■□□ 2.19
PLOD1-202ENST00000358133 SHROOM4Q9ULL8 1493 aa28.63■■■□□ 2.17
PLOD1-202ENST00000358133 CC2D2AQ9P2K1 1620 aa28.35■■■□□ 2.13
PLOD1-202ENST00000358133 EIF4G1Q04637 1599 aaKnown RBP28.33■■■□□ 2.12
PLOD1-202ENST00000358133 CECR2Q9BXF3 1484 aa28.2■■■□□ 2.1
PLOD1-202ENST00000358133 DNAJC5Q9H3Z4 198 aa28.02■■■□□ 2.08
PLOD1-202ENST00000358133 SMARCA4P51532 1647 aa27.43■■□□□ 1.98
PLOD1-202ENST00000358133 NCAPD3P42695 1498 aa27.43■■□□□ 1.98
PLOD1-202ENST00000358133 ATAD2BQ9ULI0 1458 aa27.38■■□□□ 1.97
PLOD1-202ENST00000358133 SMARCA2P51531 1590 aa27.3■■□□□ 1.96
PLOD1-202ENST00000358133 BAZ1AQ9NRL2 1556 aaPredicted RBP27.27■■□□□ 1.96
PLOD1-202ENST00000358133 HMGXB3Q12766 1538 aa27.26■■□□□ 1.96
PLOD1-202ENST00000358133 PEG3Q9GZU2 1588 aa27.17■■□□□ 1.94
PLOD1-202ENST00000358133 MROH2BQ7Z745 1585 aa27.12■■□□□ 1.93
PLOD1-202ENST00000358133 BAZ1BQ9UIG0 1483 aaKnown RBP27.11■■□□□ 1.93
PLOD1-202ENST00000358133 NESP48681 1621 aa27■■□□□ 1.91
PLOD1-202ENST00000358133 ERCC6Q03468 1493 aa27■■□□□ 1.91
PLOD1-202ENST00000358133 CUX2O14529 1486 aa26.93■■□□□ 1.9
PLOD1-202ENST00000358133 WIZO95785 1651 aa26.83■■□□□ 1.89
PLOD1-202ENST00000358133 LAMC3Q9Y6N6 1575 aa26.8■■□□□ 1.88
PLOD1-202ENST00000358133 THOC2Q8NI27 1593 aaKnown RBP26.72■■□□□ 1.87
PLOD1-202ENST00000358133 KIF21AQ7Z4S6 1674 aa26.7■■□□□ 1.86
PLOD1-202ENST00000358133 RSF1Q96T23 1441 aaPredicted RBP26.58■■□□□ 1.85
PLOD1-202ENST00000358133 PDS5BQ9NTI5 1447 aa26.58■■□□□ 1.85
PLOD1-202ENST00000358133 CADPSQ9ULU8 1353 aa26.58■■□□□ 1.84
PLOD1-202ENST00000358133 TRIM41Q8WV44 630 aa26.48■■□□□ 1.83
PLOD1-202ENST00000358133 TOP2AP11388 1531 aaKnown RBP26.46■■□□□ 1.83
PLOD1-202ENST00000358133 MRC2Q9UBG0 1479 aa26.39■■□□□ 1.82
PLOD1-202ENST00000358133 WDR62O43379 1518 aa26.36■■□□□ 1.81
PLOD1-202ENST00000358133 CFTRP13569 1480 aa26.34■■□□□ 1.81
PLOD1-202ENST00000358133 CEP164Q9UPV0 1460 aa26.31■■□□□ 1.8
PLOD1-202ENST00000358133 FANCD2Q9BXW9 1451 aa26.3■■□□□ 1.8
PLOD1-202ENST00000358133 PRDM2Q13029 1718 aa26.18■■□□□ 1.78
PLOD1-202ENST00000358133 CCDC88BA6NC98 1476 aa26.15■■□□□ 1.78
PLOD1-202ENST00000358133 URB2Q14146 1524 aaKnown RBP26.11■■□□□ 1.77
PLOD1-202ENST00000358133 TOPBP1Q92547 1522 aa25.84■■□□□ 1.73
PLOD1-202ENST00000358133 IFT140Q96RY7 1462 aa25.77■■□□□ 1.72
PLOD1-202ENST00000358133 ZNF608Q9ULD9 1512 aaPredicted RBP25.77■■□□□ 1.72
PLOD1-202ENST00000358133 DNMBPQ6XZF7 1577 aa25.77■■□□□ 1.72
PLOD1-202ENST00000358133 ABCC8Q09428 1581 aa25.73■■□□□ 1.71
PLOD1-202ENST00000358133 EIF4G3O43432 1585 aaKnown RBP25.65■■□□□ 1.7
PLOD1-202ENST00000358133 TARBP1Q13395 1621 aaKnown RBP25.64■■□□□ 1.7
PLOD1-202ENST00000358133 OSCARQ8IYS5 282 aa25.64■■□□□ 1.7
PLOD1-202ENST00000358133 POLA1P09884 1462 aaPredicted RBP25.59■■□□□ 1.69
PLOD1-202ENST00000358133 AQRO60306 1485 aaKnown RBP eCLIP25.52■■□□□ 1.689e-8■■■■■ 31.4
PLOD1-202ENST00000358133 RAD54L2Q9Y4B4 1467 aa25.49■■□□□ 1.67
PLOD1-202ENST00000358133 CUX1P39880 1505 aa25.47■■□□□ 1.67
PLOD1-202ENST00000358133 CHD1O14646 1710 aa25.46■■□□□ 1.67
PLOD1-202ENST00000358133 FGD5Q6ZNL6 1462 aa25.45■■□□□ 1.66
PLOD1-202ENST00000358133 SUPT5HO00267 1087 aaKnown RBP25.44■■□□□ 1.66
PLOD1-202ENST00000358133 RIMBP3CA6NJZ7 1639 aa25.43■■□□□ 1.66
PLOD1-202ENST00000358133 RIMBP3BA6NNM3 1639 aa25.43■■□□□ 1.66
PLOD1-202ENST00000358133 RIMBP3Q9UFD9 1639 aa25.43■■□□□ 1.66
PLOD1-202ENST00000358133 SOGA1O94964 1423 aa25.42■■□□□ 1.66
PLOD1-202ENST00000358133 TDRD9Q8NDG6 1382 aaKnown RBP25.37■■□□□ 1.65
PLOD1-202ENST00000358133 WDR97A6NE52 1622 aa25.34■■□□□ 1.65
PLOD1-202ENST00000358133 ARHGEF11O15085 1522 aa25.34■■□□□ 1.65
PLOD1-202ENST00000358133 SNAPC4Q5SXM2 1469 aa25.28■■□□□ 1.64
PLOD1-202ENST00000358133 FBLN2P98095 1184 aa25.23■■□□□ 1.63
PLOD1-202ENST00000358133 PBRM1Q86U86 1689 aa25.2■■□□□ 1.63
PLOD1-202ENST00000358133 GRIN2BQ13224 1484 aa25.2■■□□□ 1.62
PLOD1-202ENST00000358133 MAGI1Q96QZ7 1491 aaPredicted RBP25.19■■□□□ 1.62
PLOD1-202ENST00000358133 ABCA5Q8WWZ7 1642 aa25.16■■□□□ 1.62
PLOD1-202ENST00000358133 ABCA10Q8WWZ4 1543 aa25.16■■□□□ 1.62
PLOD1-202ENST00000358133 CLASP1Q7Z460 1538 aa25.14■■□□□ 1.62
PLOD1-202ENST00000358133 GAPVD1Q14C86 1478 aa25.14■■□□□ 1.61
PLOD1-202ENST00000358133 BIVM-ERCC5R4GMW8 1640 aa25.13■■□□□ 1.61
PLOD1-202ENST00000358133 SYNJ2O15056 1496 aa25.11■■□□□ 1.61
PLOD1-202ENST00000358133 ARAP1Q96P48 1450 aa25.11■■□□□ 1.61
PLOD1-202ENST00000358133 TRHP20396 242 aaPredicted RBP25.11■■□□□ 1.61
PLOD1-202ENST00000358133 SYNJ1O43426 1573 aa25.1■■□□□ 1.61
PLOD1-202ENST00000358133 TOP2BQ02880 1626 aa25.1■■□□□ 1.61
PLOD1-202ENST00000358133 CYB5RLQ6IPT4 315 aa25.09■■□□□ 1.61
PLOD1-202ENST00000358133 CHMP7Q8WUX9 453 aaPredicted RBP25.07■■□□□ 1.6
PLOD1-202ENST00000358133 WRNQ14191 1432 aaPredicted RBP eCLIP25.05■■□□□ 1.6
PLOD1-202ENST00000358133 AEBP2Q6ZN18 517 aaPredicted RBP25.04■■□□□ 1.6
PLOD1-202ENST00000358133 ADAMTS12P58397 1594 aa24.95■■□□□ 1.58
PLOD1-202ENST00000358133 GRIN2AQ12879 1464 aa24.89■■□□□ 1.58
PLOD1-202ENST00000358133 CEP170Q5SW79 1584 aa24.84■■□□□ 1.57
PLOD1-202ENST00000358133 ERICH3Q5RHP9 1530 aa24.84■■□□□ 1.57
PLOD1-202ENST00000358133 FHAD1B1AJZ9 1412 aa24.81■■□□□ 1.56
PLOD1-202ENST00000358133 NUP160Q12769 1436 aa24.81■■□□□ 1.56
PLOD1-202ENST00000358133 ERCC6L2Q5T890 1561 aa24.79■■□□□ 1.56
PLOD1-202ENST00000358133 SHROOM2Q13796 1616 aa24.74■■□□□ 1.55
PLOD1-202ENST00000358133 RUSC2Q8N2Y8 1516 aa24.61■■□□□ 1.53
PLOD1-202ENST00000358133 KIF27Q86VH2 1401 aa24.54■■□□□ 1.52
PLOD1-202ENST00000358133 IGF1RP08069 1367 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms