RNA–Protein interactions for RNA: ENST00000429000.6

PLOD1-203, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 1, humanhuman

TSL 5

Gene PLOD1, Length 886 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD1-203ENST00000429000 NISCHQ9Y2I1 1504 aa38.8■■■■□ 3.8
PLOD1-203ENST00000429000 CCDC180Q9P1Z9 1646 aa34.53■■■■□ 3.12
PLOD1-203ENST00000429000 ABCC9O60706 1549 aa33.88■■■■□ 3.01
PLOD1-203ENST00000429000 RB1CC1Q8TDY2 1594 aa32.54■■■□□ 2.8
PLOD1-203ENST00000429000 DCAF8L2P0C7V8 631 aa32.5■■■□□ 2.79
PLOD1-203ENST00000429000 NACADO15069 1562 aa32.48■■■□□ 2.79
PLOD1-203ENST00000429000 ZCCHC6Q5VYS8 1495 aaKnown RBP32.3■■■□□ 2.76
PLOD1-203ENST00000429000 MYO15BQ96JP2 1530 aa32.24■■■□□ 2.75
PLOD1-203ENST00000429000 DCAF1Q9Y4B6 1507 aa32.08■■■□□ 2.73
PLOD1-203ENST00000429000 UNC13AQ9UPW8 1703 aa31.8■■■□□ 2.68
PLOD1-203ENST00000429000 PABPN1Q86U42 306 aaKnown RBP eCLIP31.65■■■□□ 2.66
PLOD1-203ENST00000429000 BICRAQ9NZM4 1560 aa31.56■■■□□ 2.64
PLOD1-203ENST00000429000 SCRIBQ14160 1630 aa31.52■■■□□ 2.64
PLOD1-203ENST00000429000 SHROOM4Q9ULL8 1493 aa31.2■■■□□ 2.58
PLOD1-203ENST00000429000 DNAJC5BQ9UF47 199 aa31.14■■■□□ 2.58
PLOD1-203ENST00000429000 EIF4G1Q04637 1599 aaKnown RBP30.73■■■□□ 2.51
PLOD1-203ENST00000429000 CC2D2AQ9P2K1 1620 aa30.63■■■□□ 2.49
PLOD1-203ENST00000429000 CECR2Q9BXF3 1484 aa30.44■■■□□ 2.46
PLOD1-203ENST00000429000 SMARCA4P51532 1647 aa30.13■■■□□ 2.41
PLOD1-203ENST00000429000 BAZ1AQ9NRL2 1556 aaPredicted RBP30.08■■■□□ 2.41
PLOD1-203ENST00000429000 ATAD2BQ9ULI0 1458 aa29.98■■■□□ 2.39
PLOD1-203ENST00000429000 NCAPD3P42695 1498 aa29.96■■■□□ 2.39
PLOD1-203ENST00000429000 SMARCA2P51531 1590 aa29.94■■■□□ 2.38
PLOD1-203ENST00000429000 MROH2BQ7Z745 1585 aa29.91■■■□□ 2.38
PLOD1-203ENST00000429000 PEG3Q9GZU2 1588 aa29.81■■■□□ 2.36
PLOD1-203ENST00000429000 HMGXB3Q12766 1538 aa29.81■■■□□ 2.36
PLOD1-203ENST00000429000 BAZ1BQ9UIG0 1483 aaKnown RBP29.74■■■□□ 2.35
PLOD1-203ENST00000429000 WIZO95785 1651 aa29.59■■■□□ 2.33
PLOD1-203ENST00000429000 RSF1Q96T23 1441 aaPredicted RBP29.54■■■□□ 2.32
PLOD1-203ENST00000429000 NESP48681 1621 aa29.29■■■□□ 2.28
PLOD1-203ENST00000429000 TOP2AP11388 1531 aaKnown RBP29.26■■■□□ 2.27
PLOD1-203ENST00000429000 ERCC6Q03468 1493 aa29.22■■■□□ 2.27
PLOD1-203ENST00000429000 LAMC3Q9Y6N6 1575 aa29.2■■■□□ 2.26
PLOD1-203ENST00000429000 CADPSQ9ULU8 1353 aa29.1■■■□□ 2.25
PLOD1-203ENST00000429000 PDS5BQ9NTI5 1447 aa29.01■■■□□ 2.23
PLOD1-203ENST00000429000 KIF21AQ7Z4S6 1674 aa28.95■■■□□ 2.22
PLOD1-203ENST00000429000 CCDC88BA6NC98 1476 aa28.92■■■□□ 2.22
PLOD1-203ENST00000429000 CUX2O14529 1486 aa28.91■■■□□ 2.22
PLOD1-203ENST00000429000 CFTRP13569 1480 aa28.91■■■□□ 2.22
PLOD1-203ENST00000429000 THOC2Q8NI27 1593 aaKnown RBP28.86■■■□□ 2.21
PLOD1-203ENST00000429000 FANCD2Q9BXW9 1451 aa28.78■■■□□ 2.2
PLOD1-203ENST00000429000 SUPT5HO00267 1087 aaKnown RBP28.77■■■□□ 2.2
PLOD1-203ENST00000429000 CEP164Q9UPV0 1460 aa28.75■■■□□ 2.19
PLOD1-203ENST00000429000 MRC2Q9UBG0 1479 aa28.72■■■□□ 2.19
PLOD1-203ENST00000429000 PRDM2Q13029 1718 aa28.69■■■□□ 2.18
PLOD1-203ENST00000429000 WDR62O43379 1518 aa28.61■■■□□ 2.17
PLOD1-203ENST00000429000 URB2Q14146 1524 aaKnown RBP28.48■■■□□ 2.15
PLOD1-203ENST00000429000 TOPBP1Q92547 1522 aa28.3■■■□□ 2.12
PLOD1-203ENST00000429000 ABCC8Q09428 1581 aa28.29■■■□□ 2.12
PLOD1-203ENST00000429000 DNMBPQ6XZF7 1577 aa28.27■■■□□ 2.12
PLOD1-203ENST00000429000 IFT140Q96RY7 1462 aa28.14■■■□□ 2.09
PLOD1-203ENST00000429000 DNAJC5Q9H3Z4 198 aa28.1■■■□□ 2.09
PLOD1-203ENST00000429000 CUX1P39880 1505 aa28.07■■■□□ 2.08
PLOD1-203ENST00000429000 POLA1P09884 1462 aaPredicted RBP28.06■■■□□ 2.08
PLOD1-203ENST00000429000 ZNF608Q9ULD9 1512 aaPredicted RBP28.02■■■□□ 2.08
PLOD1-203ENST00000429000 TARBP1Q13395 1621 aaKnown RBP28■■■□□ 2.07
PLOD1-203ENST00000429000 FGD5Q6ZNL6 1462 aa27.99■■■□□ 2.07
PLOD1-203ENST00000429000 SOGA1O94964 1423 aa27.95■■■□□ 2.07
PLOD1-203ENST00000429000 RAD54L2Q9Y4B4 1467 aa27.95■■■□□ 2.06
PLOD1-203ENST00000429000 EIF4G3O43432 1585 aaKnown RBP27.92■■■□□ 2.06
PLOD1-203ENST00000429000 AQRO60306 1485 aaKnown RBP eCLIP27.86■■■□□ 2.052e-7■■■■■ 29
PLOD1-203ENST00000429000 WRNQ14191 1432 aaPredicted RBP eCLIP27.85■■■□□ 2.05
PLOD1-203ENST00000429000 BIVM-ERCC5R4GMW8 1640 aa27.81■■■□□ 2.04
PLOD1-203ENST00000429000 TDRD9Q8NDG6 1382 aaKnown RBP27.8■■■□□ 2.04
PLOD1-203ENST00000429000 TOP2BQ02880 1626 aa27.8■■■□□ 2.04
PLOD1-203ENST00000429000 SYNJ1O43426 1573 aa27.79■■■□□ 2.04
PLOD1-203ENST00000429000 WDR97A6NE52 1622 aa27.76■■■□□ 2.03
PLOD1-203ENST00000429000 OSCARQ8IYS5 282 aa27.71■■■□□ 2.03
PLOD1-203ENST00000429000 ABCA10Q8WWZ4 1543 aa27.7■■■□□ 2.02
PLOD1-203ENST00000429000 GRIN2BQ13224 1484 aa27.63■■■□□ 2.01
PLOD1-203ENST00000429000 GAPVD1Q14C86 1478 aa27.63■■■□□ 2.01
PLOD1-203ENST00000429000 SNAPC4Q5SXM2 1469 aa27.61■■■□□ 2.01
PLOD1-203ENST00000429000 ABCA5Q8WWZ7 1642 aa27.6■■■□□ 2.01
PLOD1-203ENST00000429000 PBRM1Q86U86 1689 aa27.58■■■□□ 2.01
PLOD1-203ENST00000429000 CHD1O14646 1710 aa27.58■■■□□ 2.01
PLOD1-203ENST00000429000 FBLN2P98095 1184 aa27.57■■■□□ 2
PLOD1-203ENST00000429000 MAGI1Q96QZ7 1491 aaPredicted RBP27.56■■■□□ 2
PLOD1-203ENST00000429000 CHMP7Q8WUX9 453 aaPredicted RBP27.47■■□□□ 1.99
PLOD1-203ENST00000429000 SYNJ2O15056 1496 aa27.45■■□□□ 1.99
PLOD1-203ENST00000429000 ERICH3Q5RHP9 1530 aa27.37■■□□□ 1.97
PLOD1-203ENST00000429000 ADAMTS12P58397 1594 aa27.34■■□□□ 1.97
PLOD1-203ENST00000429000 FHAD1B1AJZ9 1412 aa27.3■■□□□ 1.96
PLOD1-203ENST00000429000 KIF27Q86VH2 1401 aa27.28■■□□□ 1.96
PLOD1-203ENST00000429000 RIMBP3CA6NJZ7 1639 aa27.27■■□□□ 1.96
PLOD1-203ENST00000429000 RIMBP3BA6NNM3 1639 aa27.27■■□□□ 1.96
PLOD1-203ENST00000429000 RIMBP3Q9UFD9 1639 aa27.27■■□□□ 1.96
PLOD1-203ENST00000429000 GRIN2AQ12879 1464 aa27.27■■□□□ 1.96
PLOD1-203ENST00000429000 CLASP1Q7Z460 1538 aa27.26■■□□□ 1.96
PLOD1-203ENST00000429000 ARHGEF11O15085 1522 aa27.26■■□□□ 1.95
PLOD1-203ENST00000429000 TRIM41Q8WV44 630 aa27.2■■□□□ 1.94
PLOD1-203ENST00000429000 IGF1RP08069 1367 aa27.17■■□□□ 1.94
PLOD1-203ENST00000429000 NUP160Q12769 1436 aa27.15■■□□□ 1.94
PLOD1-203ENST00000429000 CEP170Q5SW79 1584 aa27.14■■□□□ 1.93
PLOD1-203ENST00000429000 CUL7Q14999 1698 aa27.11■■□□□ 1.93
PLOD1-203ENST00000429000 CYB5RLQ6IPT4 315 aa27.03■■□□□ 1.92
PLOD1-203ENST00000429000 ARAP1Q96P48 1450 aa27.03■■□□□ 1.92
PLOD1-203ENST00000429000 CARMIL1Q5VZK9 1371 aa27.02■■□□□ 1.92
PLOD1-203ENST00000429000 RUSC2Q8N2Y8 1516 aa27.01■■□□□ 1.91
PLOD1-203ENST00000429000 SHROOM2Q13796 1616 aa26.94■■□□□ 1.9
PLOD1-203ENST00000429000 ERCC6L2Q5T890 1561 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms