RNA–Protein interactions for RNA: ENST00000535859.1

UBC-203, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-203ENST00000535859 NISCHQ9Y2I1 1504 aa33.15■■■□□ 2.9
UBC-203ENST00000535859 CCDC180Q9P1Z9 1646 aa29.41■■■□□ 2.3
UBC-203ENST00000535859 ABCC9O60706 1549 aa27.9■■■□□ 2.06
UBC-203ENST00000535859 ZCCHC6Q5VYS8 1495 aaKnown RBP27.8■■■□□ 2.04
UBC-203ENST00000535859 DCAF1Q9Y4B6 1507 aa27.59■■■□□ 2.01
UBC-203ENST00000535859 MYO15BQ96JP2 1530 aa27.52■■■□□ 2
UBC-203ENST00000535859 NACADO15069 1562 aa27.4■■□□□ 1.98
UBC-203ENST00000535859 RB1CC1Q8TDY2 1594 aa27.26■■□□□ 1.96
UBC-203ENST00000535859 DCAF8L2P0C7V8 631 aa27.04■■□□□ 1.92
UBC-203ENST00000535859 UNC13AQ9UPW8 1703 aa26.76■■□□□ 1.88
UBC-203ENST00000535859 SCRIBQ14160 1630 aa26.66■■□□□ 1.86
UBC-203ENST00000535859 BICRAQ9NZM4 1560 aa26.43■■□□□ 1.82
UBC-203ENST00000535859 SHROOM4Q9ULL8 1493 aa26.34■■□□□ 1.81
UBC-203ENST00000535859 PABPN1Q86U42 306 aaKnown RBP eCLIP26.02■■□□□ 1.76
UBC-203ENST00000535859 BAZ1AQ9NRL2 1556 aaPredicted RBP25.69■■□□□ 1.7
UBC-203ENST00000535859 EIF4G1Q04637 1599 aaKnown RBP25.66■■□□□ 1.7
UBC-203ENST00000535859 CECR2Q9BXF3 1484 aa25.66■■□□□ 1.7
UBC-203ENST00000535859 SMARCA4P51532 1647 aa25.65■■□□□ 1.7
UBC-203ENST00000535859 MROH2BQ7Z745 1585 aa25.51■■□□□ 1.67
UBC-203ENST00000535859 PEG3Q9GZU2 1588 aa25.48■■□□□ 1.67
UBC-203ENST00000535859 RSF1Q96T23 1441 aaPredicted RBP25.4■■□□□ 1.66
UBC-203ENST00000535859 CC2D2AQ9P2K1 1620 aa25.39■■□□□ 1.66
UBC-203ENST00000535859 SMARCA2P51531 1590 aa25.35■■□□□ 1.65
UBC-203ENST00000535859 ATAD2BQ9ULI0 1458 aa25.29■■□□□ 1.64
UBC-203ENST00000535859 WIZO95785 1651 aa25.29■■□□□ 1.64
UBC-203ENST00000535859 HMGXB3Q12766 1538 aa25.24■■□□□ 1.63
UBC-203ENST00000535859 NCAPD3P42695 1498 aa25.21■■□□□ 1.63
UBC-203ENST00000535859 TOP2AP11388 1531 aaKnown RBP25.12■■□□□ 1.61
UBC-203ENST00000535859 BAZ1BQ9UIG0 1483 aaKnown RBP25.1■■□□□ 1.61
UBC-203ENST00000535859 DNAJC5BQ9UF47 199 aa24.98■■□□□ 1.59
UBC-203ENST00000535859 SUPT5HO00267 1087 aaKnown RBP24.92■■□□□ 1.58
UBC-203ENST00000535859 CCDC88BA6NC98 1476 aa24.7■■□□□ 1.55
UBC-203ENST00000535859 PRDM2Q13029 1718 aa24.58■■□□□ 1.52
UBC-203ENST00000535859 LAMC3Q9Y6N6 1575 aa24.53■■□□□ 1.52
UBC-203ENST00000535859 CFTRP13569 1480 aa24.49■■□□□ 1.51
UBC-203ENST00000535859 CADPSQ9ULU8 1353 aa24.43■■□□□ 1.5
UBC-203ENST00000535859 NESP48681 1621 aa24.32■■□□□ 1.48
UBC-203ENST00000535859 KIF21AQ7Z4S6 1674 aa24.22■■□□□ 1.47
UBC-203ENST00000535859 PDS5BQ9NTI5 1447 aa24.22■■□□□ 1.47
UBC-203ENST00000535859 FANCD2Q9BXW9 1451 aa24.18■■□□□ 1.46
UBC-203ENST00000535859 CEP164Q9UPV0 1460 aa24.13■■□□□ 1.45
UBC-203ENST00000535859 THOC2Q8NI27 1593 aaKnown RBP24.03■■□□□ 1.44
UBC-203ENST00000535859 ERCC6Q03468 1493 aa24.01■■□□□ 1.43
UBC-203ENST00000535859 MRC2Q9UBG0 1479 aa23.98■■□□□ 1.43
UBC-203ENST00000535859 ABCC8Q09428 1581 aa23.98■■□□□ 1.43
UBC-203ENST00000535859 BIVM-ERCC5R4GMW8 1640 aa23.98■■□□□ 1.43
UBC-203ENST00000535859 DNMBPQ6XZF7 1577 aa23.97■■□□□ 1.43
UBC-203ENST00000535859 WDR62O43379 1518 aa23.95■■□□□ 1.43
UBC-203ENST00000535859 WRNQ14191 1432 aaPredicted RBP eCLIP23.93■■□□□ 1.429e-6■■■■■ 50.1
UBC-203ENST00000535859 TOP2BQ02880 1626 aa23.93■■□□□ 1.42
UBC-203ENST00000535859 URB2Q14146 1524 aaKnown RBP23.93■■□□□ 1.42
UBC-203ENST00000535859 CUX1P39880 1505 aa23.92■■□□□ 1.42
UBC-203ENST00000535859 SYNJ1O43426 1573 aa23.91■■□□□ 1.42
UBC-203ENST00000535859 TOPBP1Q92547 1522 aa23.89■■□□□ 1.42
UBC-203ENST00000535859 FGD5Q6ZNL6 1462 aa23.73■■□□□ 1.39
UBC-203ENST00000535859 POLA1P09884 1462 aaPredicted RBP23.72■■□□□ 1.39
UBC-203ENST00000535859 CHIC1Q5VXU3 224 aa23.71■■□□□ 1.39
UBC-203ENST00000535859 WDR97A6NE52 1622 aa23.7■■□□□ 1.38
UBC-203ENST00000535859 CUX2O14529 1486 aa23.69■■□□□ 1.38
UBC-203ENST00000535859 TARBP1Q13395 1621 aaKnown RBP23.66■■□□□ 1.38
UBC-203ENST00000535859 IFT140Q96RY7 1462 aa23.6■■□□□ 1.37
UBC-203ENST00000535859 TRIM41Q8WV44 630 aa23.59■■□□□ 1.37
UBC-203ENST00000535859 ABCA10Q8WWZ4 1543 aa23.59■■□□□ 1.37
UBC-203ENST00000535859 SOGA1O94964 1423 aa23.54■■□□□ 1.36
UBC-203ENST00000535859 RAD54L2Q9Y4B4 1467 aa23.51■■□□□ 1.35
UBC-203ENST00000535859 ABCA5Q8WWZ7 1642 aa23.51■■□□□ 1.35
UBC-203ENST00000535859 EIF4G3O43432 1585 aaKnown RBP23.44■■□□□ 1.34
UBC-203ENST00000535859 PBRM1Q86U86 1689 aa23.4■■□□□ 1.34
UBC-203ENST00000535859 EEA1Q15075 1411 aa23.4■■□□□ 1.34
UBC-203ENST00000535859 KIF27Q86VH2 1401 aa23.39■■□□□ 1.33
UBC-203ENST00000535859 ZNF608Q9ULD9 1512 aaPredicted RBP23.38■■□□□ 1.33
UBC-203ENST00000535859 ERICH3Q5RHP9 1530 aa23.34■■□□□ 1.33
UBC-203ENST00000535859 GAPVD1Q14C86 1478 aa23.34■■□□□ 1.33
UBC-203ENST00000535859 CUL7Q14999 1698 aa23.28■■□□□ 1.32
UBC-203ENST00000535859 GRIN2BQ13224 1484 aa23.28■■□□□ 1.32
UBC-203ENST00000535859 RUSC2Q8N2Y8 1516 aa23.28■■□□□ 1.32
UBC-203ENST00000535859 TDRD9Q8NDG6 1382 aaKnown RBP23.27■■□□□ 1.32
UBC-203ENST00000535859 AQRO60306 1485 aaKnown RBP eCLIP23.26■■□□□ 1.318e-18■■■■■ 28.7
UBC-203ENST00000535859 MAGI1Q96QZ7 1491 aaPredicted RBP23.22■■□□□ 1.31
UBC-203ENST00000535859 ADAMTS12P58397 1594 aa23.22■■□□□ 1.31
UBC-203ENST00000535859 IGF1RP08069 1367 aa23.17■■□□□ 1.3
UBC-203ENST00000535859 KIF21BO75037 1637 aa23.17■■□□□ 1.3
UBC-203ENST00000535859 SNAPC4Q5SXM2 1469 aa23.14■■□□□ 1.29
UBC-203ENST00000535859 PRXQ9BXM0 1461 aa23.14■■□□□ 1.29
UBC-203ENST00000535859 FHAD1B1AJZ9 1412 aa23.1■■□□□ 1.29
UBC-203ENST00000535859 CSRNP3Q8WYN3 585 aa23.09■■□□□ 1.29
UBC-203ENST00000535859 SYNJ2O15056 1496 aa23.08■■□□□ 1.29
UBC-203ENST00000535859 CHD1O14646 1710 aa23.05■■□□□ 1.28
UBC-203ENST00000535859 CARMIL1Q5VZK9 1371 aa23.04■■□□□ 1.28
UBC-203ENST00000535859 RAPGEF2Q9Y4G8 1499 aa23.04■■□□□ 1.28
UBC-203ENST00000535859 GRIN2AQ12879 1464 aa23■■□□□ 1.27
UBC-203ENST00000535859 GOLGA3Q08378 1498 aa22.97■■□□□ 1.27
UBC-203ENST00000535859 FAM9AQ8IZU1 332 aaPredicted RBP22.96■■□□□ 1.27
UBC-203ENST00000535859 CTTNBP2Q8WZ74 1663 aa22.96■■□□□ 1.27
UBC-203ENST00000535859 NUP160Q12769 1436 aa22.91■■□□□ 1.26
UBC-203ENST00000535859 CEP170Q5SW79 1584 aa22.88■■□□□ 1.25
UBC-203ENST00000535859 CHMP7Q8WUX9 453 aaPredicted RBP22.83■■□□□ 1.25
UBC-203ENST00000535859 CLASP1Q7Z460 1538 aa22.81■■□□□ 1.24
UBC-203ENST00000535859 KIAA0586Q9BVV6 1533 aa22.78■■□□□ 1.24
UBC-203ENST00000535859 IQGAP2Q13576 1575 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms