RNA–Protein interactions for RNA: ENST00000631619.1

CCNL1-226, Transcript of cyclin L1, humanhuman

TSL 5

Gene CCNL1, Length 2,457 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-226ENST00000631619 NISCHQ9Y2I1 1504 aa37.13■■■■□ 3.53
CCNL1-226ENST00000631619 CCDC180Q9P1Z9 1646 aa31.6■■■□□ 2.65
CCNL1-226ENST00000631619 SHROOM4Q9ULL8 1493 aa31.55■■■□□ 2.64
CCNL1-226ENST00000631619 ZCCHC6Q5VYS8 1495 aaKnown RBP31.42■■■□□ 2.62
CCNL1-226ENST00000631619 SUPT5HO00267 1087 aaKnown RBP30.93■■■□□ 2.54
CCNL1-226ENST00000631619 DCAF8L2P0C7V8 631 aa30.63■■■□□ 2.49
CCNL1-226ENST00000631619 DCAF1Q9Y4B6 1507 aa30.5■■■□□ 2.47
CCNL1-226ENST00000631619 CHIC1Q5VXU3 224 aa30.15■■■□□ 2.42
CCNL1-226ENST00000631619 MYO15BQ96JP2 1530 aa30.07■■■□□ 2.4
CCNL1-226ENST00000631619 HRCP23327 699 aa29.69■■■□□ 2.34
CCNL1-226ENST00000631619 ABCC9O60706 1549 aa29.66■■■□□ 2.34
CCNL1-226ENST00000631619 SCRIBQ14160 1630 aa29.56■■■□□ 2.32
CCNL1-226ENST00000631619 RSF1Q96T23 1441 aaPredicted RBP29.37■■■□□ 2.29
CCNL1-226ENST00000631619 LOC105371045A0A1W2PR82 267 aa29.22■■■□□ 2.27
CCNL1-226ENST00000631619 NACADO15069 1562 aa29.19■■■□□ 2.26
CCNL1-226ENST00000631619 PCGF6Q9BYE7 350 aa29.17■■■□□ 2.26
CCNL1-226ENST00000631619 RB1CC1Q8TDY2 1594 aa29.08■■■□□ 2.25
CCNL1-226ENST00000631619 CECR2Q9BXF3 1484 aa28.94■■■□□ 2.22
CCNL1-226ENST00000631619 PPARGC1BQ86YN6 1023 aaKnown RBP28.88■■■□□ 2.21
CCNL1-226ENST00000631619 MROH2BQ7Z745 1585 aa28.86■■■□□ 2.21
CCNL1-226ENST00000631619 TRIM41Q8WV44 630 aa28.84■■■□□ 2.21
CCNL1-226ENST00000631619 WIZO95785 1651 aa28.72■■■□□ 2.19
CCNL1-226ENST00000631619 TRIM26Q12899 539 aaPredicted RBP28.64■■■□□ 2.18
CCNL1-226ENST00000631619 FAM9AQ8IZU1 332 aaPredicted RBP28.57■■■□□ 2.16
CCNL1-226ENST00000631619 BAZ1AQ9NRL2 1556 aaPredicted RBP28.55■■■□□ 2.16
CCNL1-226ENST00000631619 PELP1Q8IZL8 1130 aaKnown RBP28.45■■■□□ 2.15
CCNL1-226ENST00000631619 EIF4G1Q04637 1599 aaKnown RBP28.38■■■□□ 2.13
CCNL1-226ENST00000631619 UNC13AQ9UPW8 1703 aa28.35■■■□□ 2.13
CCNL1-226ENST00000631619 SMARCA4P51532 1647 aa28.29■■■□□ 2.12
CCNL1-226ENST00000631619 EHMT2Q96KQ7 1210 aa28.28■■■□□ 2.12
CCNL1-226ENST00000631619 TOP2AP11388 1531 aaKnown RBP28.26■■■□□ 2.11
CCNL1-226ENST00000631619 CCDC88BA6NC98 1476 aa28.13■■■□□ 2.09
CCNL1-226ENST00000631619 SMARCA2P51531 1590 aa28.12■■■□□ 2.09
CCNL1-226ENST00000631619 ZEB1P37275 1124 aaPredicted RBP28.11■■■□□ 2.09
CCNL1-226ENST00000631619 ABCC8Q09428 1581 aa28.05■■■□□ 2.08
CCNL1-226ENST00000631619 BICRAQ9NZM4 1560 aa27.96■■■□□ 2.07
CCNL1-226ENST00000631619 SCAF1Q9H7N4 1312 aaKnown RBP27.89■■■□□ 2.06
CCNL1-226ENST00000631619 PABPN1Q86U42 306 aaKnown RBP eCLIP27.87■■■□□ 2.058e-6■□□□□ 8.9
CCNL1-226ENST00000631619 SOGA1O94964 1423 aa27.78■■■□□ 2.04
CCNL1-226ENST00000631619 PEG3Q9GZU2 1588 aa27.77■■■□□ 2.04
CCNL1-226ENST00000631619 WRNQ14191 1432 aaPredicted RBP eCLIP27.66■■■□□ 2.022e-6■■■■□ 22.3
CCNL1-226ENST00000631619 CEP162Q5TB80 1403 aa27.66■■■□□ 2.02
CCNL1-226ENST00000631619 EEA1Q15075 1411 aa27.66■■■□□ 2.02
CCNL1-226ENST00000631619 RUSC2Q8N2Y8 1516 aa27.66■■■□□ 2.02
CCNL1-226ENST00000631619 TNIKQ9UKE5 1360 aa27.62■■■□□ 2.01
CCNL1-226ENST00000631619 CSRNP3Q8WYN3 585 aa27.6■■■□□ 2.01
CCNL1-226ENST00000631619 ATAD2BQ9ULI0 1458 aa27.54■■■□□ 2
CCNL1-226ENST00000631619 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.48■■□□□ 1.99
CCNL1-226ENST00000631619 SYNJ1O43426 1573 aa27.47■■□□□ 1.99
CCNL1-226ENST00000631619 GOLGA3Q08378 1498 aa27.46■■□□□ 1.99
CCNL1-226ENST00000631619 UBTFP17480 764 aaKnown RBP27.45■■□□□ 1.99
CCNL1-226ENST00000631619 BAZ1BQ9UIG0 1483 aaKnown RBP27.44■■□□□ 1.98
CCNL1-226ENST00000631619 CCER1Q8TC90 406 aaPredicted RBP27.39■■□□□ 1.97
CCNL1-226ENST00000631619 TTBK1Q5TCY1 1321 aaPredicted RBP27.38■■□□□ 1.97
CCNL1-226ENST00000631619 ACIN1Q9UKV3 1341 aaKnown RBP27.34■■□□□ 1.97
CCNL1-226ENST00000631619 MYT1Q01538 1121 aa27.33■■□□□ 1.97
CCNL1-226ENST00000631619 KIF21BO75037 1637 aa27.32■■□□□ 1.96
CCNL1-226ENST00000631619 CEP164Q9UPV0 1460 aa27.31■■□□□ 1.96
CCNL1-226ENST00000631619 NEUROD1Q13562 356 aa27.19■■□□□ 1.94
CCNL1-226ENST00000631619 TOP2BQ02880 1626 aa27.15■■□□□ 1.94
CCNL1-226ENST00000631619 CLIP1P30622 1438 aa27.13■■□□□ 1.93
CCNL1-226ENST00000631619 RAPGEF2Q9Y4G8 1499 aa27.11■■□□□ 1.93
CCNL1-226ENST00000631619 CENPBP07199 599 aaPredicted RBP27.06■■□□□ 1.92
CCNL1-226ENST00000631619 BIVM-ERCC5R4GMW8 1640 aa27.06■■□□□ 1.92
CCNL1-226ENST00000631619 VPS8Q8N3P4 1428 aa27.04■■□□□ 1.92
CCNL1-226ENST00000631619 GTF3C3Q9Y5Q9 886 aa27.03■■□□□ 1.92
CCNL1-226ENST00000631619 HMGXB3Q12766 1538 aa27.02■■□□□ 1.92
CCNL1-226ENST00000631619 NCAPD3P42695 1498 aa27.01■■□□□ 1.91
CCNL1-226ENST00000631619 DIEXFQ68CQ4 756 aaKnown RBP26.96■■□□□ 1.91
CCNL1-226ENST00000631619 PRXQ9BXM0 1461 aa26.87■■□□□ 1.89
CCNL1-226ENST00000631619 CUX1P39880 1505 aa26.87■■□□□ 1.89
CCNL1-226ENST00000631619 ERICH3Q5RHP9 1530 aa26.87■■□□□ 1.89
CCNL1-226ENST00000631619 RANGAP1P46060 587 aaPredicted RBP26.85■■□□□ 1.89
CCNL1-226ENST00000631619 HNRNPUL2Q1KMD3 747 aaKnown RBP26.84■■□□□ 1.89
CCNL1-226ENST00000631619 APLP2Q06481 763 aa26.82■■□□□ 1.88
CCNL1-226ENST00000631619 CFTRP13569 1480 aa26.8■■□□□ 1.88
CCNL1-226ENST00000631619 ARAP1Q96P48 1450 aa26.73■■□□□ 1.87
CCNL1-226ENST00000631619 KIF27Q86VH2 1401 aa26.71■■□□□ 1.87
CCNL1-226ENST00000631619 ZNF316A6NFI3 1004 aaPredicted RBP26.68■■□□□ 1.86
CCNL1-226ENST00000631619 PRDM2Q13029 1718 aa26.64■■□□□ 1.86
CCNL1-226ENST00000631619 KANK4Q5T7N3 995 aaPredicted RBP26.55■■□□□ 1.84
CCNL1-226ENST00000631619 ARHGAP35Q9NRY4 1499 aa26.5■■□□□ 1.83
CCNL1-226ENST00000631619 CC2D2AQ9P2K1 1620 aa26.48■■□□□ 1.83
CCNL1-226ENST00000631619 CADPSQ9ULU8 1353 aa26.47■■□□□ 1.83
CCNL1-226ENST00000631619 CUX2O14529 1486 aa26.45■■□□□ 1.82
CCNL1-226ENST00000631619 IGF1RP08069 1367 aa26.44■■□□□ 1.82
CCNL1-226ENST00000631619 RRBP1Q9P2E9 1410 aaKnown RBP26.42■■□□□ 1.82
CCNL1-226ENST00000631619 DHX57Q6P158 1386 aaKnown RBP26.4■■□□□ 1.82
CCNL1-226ENST00000631619 FGD5Q6ZNL6 1462 aa26.37■■□□□ 1.81
CCNL1-226ENST00000631619 CLSPNQ9HAW4 1339 aa26.37■■□□□ 1.81
CCNL1-226ENST00000631619 YTHDC1Q96MU7 727 aaKnown RBP26.35■■□□□ 1.81
CCNL1-226ENST00000631619 CARMIL1Q5VZK9 1371 aa26.31■■□□□ 1.8
CCNL1-226ENST00000631619 MIER1Q8N108 512 aa26.3■■□□□ 1.8
CCNL1-226ENST00000631619 CCNB3Q8WWL7 1395 aa26.28■■□□□ 1.8
CCNL1-226ENST00000631619 TIAM1Q13009 1591 aa26.22■■□□□ 1.79
CCNL1-226ENST00000631619 FANCD2Q9BXW9 1451 aa26.21■■□□□ 1.79
CCNL1-226ENST00000631619 MAP3K1Q13233 1512 aa26.21■■□□□ 1.79
CCNL1-226ENST00000631619 DNMBPQ6XZF7 1577 aa26.12■■□□□ 1.77
CCNL1-226ENST00000631619 LRRC9Q6ZRR7 1453 aa26.11■■□□□ 1.77
CCNL1-226ENST00000631619 ITGAEP38570 1179 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms