RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 NISCHQ9Y2I1 1504 aa37.09■■■■□ 3.53
UBC-204ENST00000536661 CCDC180Q9P1Z9 1646 aa33.2■■■□□ 2.91
UBC-204ENST00000536661 ABCC9O60706 1549 aa32.77■■■□□ 2.84
UBC-204ENST00000536661 RB1CC1Q8TDY2 1594 aa31.36■■■□□ 2.61
UBC-204ENST00000536661 NACADO15069 1562 aa31.23■■■□□ 2.59
UBC-204ENST00000536661 DCAF8L2P0C7V8 631 aa31.02■■■□□ 2.56
UBC-204ENST00000536661 MYO15BQ96JP2 1530 aa30.91■■■□□ 2.54
UBC-204ENST00000536661 ZCCHC6Q5VYS8 1495 aaKnown RBP30.84■■■□□ 2.53
UBC-204ENST00000536661 UNC13AQ9UPW8 1703 aa30.79■■■□□ 2.52
UBC-204ENST00000536661 DNAJC5BQ9UF47 199 aa30.67■■■□□ 2.5
UBC-204ENST00000536661 DCAF1Q9Y4B6 1507 aa30.66■■■□□ 2.5
UBC-204ENST00000536661 PABPN1Q86U42 306 aaKnown RBP eCLIP30.56■■■□□ 2.48
UBC-204ENST00000536661 BICRAQ9NZM4 1560 aa30.47■■■□□ 2.47
UBC-204ENST00000536661 SCRIBQ14160 1630 aa30.25■■■□□ 2.43
UBC-204ENST00000536661 SHROOM4Q9ULL8 1493 aa30.05■■■□□ 2.4
UBC-204ENST00000536661 EIF4G1Q04637 1599 aaKnown RBP29.67■■■□□ 2.34
UBC-204ENST00000536661 CC2D2AQ9P2K1 1620 aa29.65■■■□□ 2.34
UBC-204ENST00000536661 CECR2Q9BXF3 1484 aa29.48■■■□□ 2.31
UBC-204ENST00000536661 SMARCA4P51532 1647 aa28.9■■■□□ 2.22
UBC-204ENST00000536661 NCAPD3P42695 1498 aa28.78■■■□□ 2.2
UBC-204ENST00000536661 ATAD2BQ9ULI0 1458 aa28.78■■■□□ 2.2
UBC-204ENST00000536661 BAZ1AQ9NRL2 1556 aaPredicted RBP28.77■■■□□ 2.2
UBC-204ENST00000536661 SMARCA2P51531 1590 aa28.73■■■□□ 2.19
UBC-204ENST00000536661 HMGXB3Q12766 1538 aa28.67■■■□□ 2.18
UBC-204ENST00000536661 PEG3Q9GZU2 1588 aa28.6■■■□□ 2.17
UBC-204ENST00000536661 MROH2BQ7Z745 1585 aa28.59■■■□□ 2.17
UBC-204ENST00000536661 BAZ1BQ9UIG0 1483 aaKnown RBP28.53■■■□□ 2.16
UBC-204ENST00000536661 WIZO95785 1651 aa28.31■■■□□ 2.12
UBC-204ENST00000536661 NESP48681 1621 aa28.25■■■□□ 2.11
UBC-204ENST00000536661 ERCC6Q03468 1493 aa28.23■■■□□ 2.11
UBC-204ENST00000536661 LAMC3Q9Y6N6 1575 aa28.14■■■□□ 2.1
UBC-204ENST00000536661 CUX2O14529 1486 aa28.13■■■□□ 2.09
UBC-204ENST00000536661 RSF1Q96T23 1441 aaPredicted RBP28.09■■■□□ 2.09
UBC-204ENST00000536661 KIF21AQ7Z4S6 1674 aa28■■■□□ 2.07
UBC-204ENST00000536661 THOC2Q8NI27 1593 aaKnown RBP27.96■■■□□ 2.07
UBC-204ENST00000536661 DNAJC5Q9H3Z4 198 aa27.95■■■□□ 2.06
UBC-204ENST00000536661 TOP2AP11388 1531 aaKnown RBP27.95■■■□□ 2.06
UBC-204ENST00000536661 CADPSQ9ULU8 1353 aa27.91■■■□□ 2.06
UBC-204ENST00000536661 PDS5BQ9NTI5 1447 aa27.89■■■□□ 2.06
UBC-204ENST00000536661 CFTRP13569 1480 aa27.7■■■□□ 2.03
UBC-204ENST00000536661 MRC2Q9UBG0 1479 aa27.67■■■□□ 2.02
UBC-204ENST00000536661 CEP164Q9UPV0 1460 aa27.64■■■□□ 2.02
UBC-204ENST00000536661 FANCD2Q9BXW9 1451 aa27.64■■■□□ 2.01
UBC-204ENST00000536661 WDR62O43379 1518 aa27.62■■■□□ 2.01
UBC-204ENST00000536661 PRDM2Q13029 1718 aa27.62■■■□□ 2.01
UBC-204ENST00000536661 CCDC88BA6NC98 1476 aa27.59■■■□□ 2.01
UBC-204ENST00000536661 URB2Q14146 1524 aaKnown RBP27.41■■□□□ 1.98
UBC-204ENST00000536661 TOPBP1Q92547 1522 aa27.17■■□□□ 1.94
UBC-204ENST00000536661 DNMBPQ6XZF7 1577 aa27.13■■□□□ 1.93
UBC-204ENST00000536661 ABCC8Q09428 1581 aa27.09■■□□□ 1.93
UBC-204ENST00000536661 SUPT5HO00267 1087 aaKnown RBP27.07■■□□□ 1.92
UBC-204ENST00000536661 IFT140Q96RY7 1462 aa27.05■■□□□ 1.92
UBC-204ENST00000536661 ZNF608Q9ULD9 1512 aaPredicted RBP27■■□□□ 1.91
UBC-204ENST00000536661 TARBP1Q13395 1621 aaKnown RBP26.94■■□□□ 1.9
UBC-204ENST00000536661 EIF4G3O43432 1585 aaKnown RBP26.92■■□□□ 1.9
UBC-204ENST00000536661 POLA1P09884 1462 aaPredicted RBP26.91■■□□□ 1.9
UBC-204ENST00000536661 OSCARQ8IYS5 282 aa26.88■■□□□ 1.89
UBC-204ENST00000536661 CUX1P39880 1505 aa26.85■■□□□ 1.89
UBC-204ENST00000536661 FGD5Q6ZNL6 1462 aa26.81■■□□□ 1.88
UBC-204ENST00000536661 RAD54L2Q9Y4B4 1467 aa26.8■■□□□ 1.88
UBC-204ENST00000536661 AQRO60306 1485 aaKnown RBP eCLIP26.76■■□□□ 1.872e-11■■■■■ 51
UBC-204ENST00000536661 TRIM41Q8WV44 630 aa26.76■■□□□ 1.87
UBC-204ENST00000536661 SOGA1O94964 1423 aa26.74■■□□□ 1.87
UBC-204ENST00000536661 CHD1O14646 1710 aa26.7■■□□□ 1.86
UBC-204ENST00000536661 WDR97A6NE52 1622 aa26.69■■□□□ 1.86
UBC-204ENST00000536661 TDRD9Q8NDG6 1382 aaKnown RBP26.64■■□□□ 1.86
UBC-204ENST00000536661 BIVM-ERCC5R4GMW8 1640 aa26.57■■□□□ 1.84
UBC-204ENST00000536661 SNAPC4Q5SXM2 1469 aa26.55■■□□□ 1.84
UBC-204ENST00000536661 PBRM1Q86U86 1689 aa26.54■■□□□ 1.84
UBC-204ENST00000536661 SYNJ1O43426 1573 aa26.53■■□□□ 1.84
UBC-204ENST00000536661 RIMBP3CA6NJZ7 1639 aa26.53■■□□□ 1.84
UBC-204ENST00000536661 RIMBP3BA6NNM3 1639 aa26.53■■□□□ 1.84
UBC-204ENST00000536661 TOP2BQ02880 1626 aa26.53■■□□□ 1.84
UBC-204ENST00000536661 RIMBP3Q9UFD9 1639 aa26.53■■□□□ 1.84
UBC-204ENST00000536661 ABCA10Q8WWZ4 1543 aa26.51■■□□□ 1.83
UBC-204ENST00000536661 ABCA5Q8WWZ7 1642 aa26.5■■□□□ 1.83
UBC-204ENST00000536661 WRNQ14191 1432 aaPredicted RBP eCLIP26.5■■□□□ 1.839e-6■■■■■ 50.1
UBC-204ENST00000536661 GRIN2BQ13224 1484 aa26.49■■□□□ 1.83
UBC-204ENST00000536661 MAGI1Q96QZ7 1491 aaPredicted RBP26.48■■□□□ 1.83
UBC-204ENST00000536661 ARHGEF11O15085 1522 aa26.46■■□□□ 1.83
UBC-204ENST00000536661 GAPVD1Q14C86 1478 aa26.46■■□□□ 1.83
UBC-204ENST00000536661 FBLN2P98095 1184 aa26.45■■□□□ 1.82
UBC-204ENST00000536661 SYNJ2O15056 1496 aa26.37■■□□□ 1.81
UBC-204ENST00000536661 CLASP1Q7Z460 1538 aa26.34■■□□□ 1.81
UBC-204ENST00000536661 CHMP7Q8WUX9 453 aaPredicted RBP26.32■■□□□ 1.8
UBC-204ENST00000536661 ADAMTS12P58397 1594 aa26.27■■□□□ 1.8
UBC-204ENST00000536661 CYB5RLQ6IPT4 315 aa26.26■■□□□ 1.79
UBC-204ENST00000536661 ARAP1Q96P48 1450 aa26.24■■□□□ 1.79
UBC-204ENST00000536661 ERICH3Q5RHP9 1530 aa26.19■■□□□ 1.78
UBC-204ENST00000536661 GRIN2AQ12879 1464 aa26.18■■□□□ 1.78
UBC-204ENST00000536661 FHAD1B1AJZ9 1412 aa26.13■■□□□ 1.77
UBC-204ENST00000536661 CEP170Q5SW79 1584 aa26.11■■□□□ 1.77
UBC-204ENST00000536661 NUP160Q12769 1436 aa26.07■■□□□ 1.76
UBC-204ENST00000536661 SHROOM2Q13796 1616 aa25.97■■□□□ 1.75
UBC-204ENST00000536661 ERCC6L2Q5T890 1561 aa25.96■■□□□ 1.75
UBC-204ENST00000536661 KIF27Q86VH2 1401 aa25.96■■□□□ 1.75
UBC-204ENST00000536661 CUL7Q14999 1698 aa25.93■■□□□ 1.74
UBC-204ENST00000536661 RUSC2Q8N2Y8 1516 aa25.9■■□□□ 1.74
UBC-204ENST00000536661 IGF1RP08069 1367 aa25.87■■□□□ 1.73
UBC-204ENST00000536661 TRHP20396 242 aaPredicted RBP25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms