RNA–Protein interactions for RNA: ENST00000546271.1

UBC-214, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-214ENST00000546271 NISCHQ9Y2I1 1504 aa29.41■■■□□ 2.3
UBC-214ENST00000546271 CCDC180Q9P1Z9 1646 aa26.45■■□□□ 1.82
UBC-214ENST00000546271 ABCC9O60706 1549 aa26.15■■□□□ 1.78
UBC-214ENST00000546271 RB1CC1Q8TDY2 1594 aa25.01■■□□□ 1.59
UBC-214ENST00000546271 NACADO15069 1562 aa24.84■■□□□ 1.57
UBC-214ENST00000546271 DCAF8L2P0C7V8 631 aa24.7■■□□□ 1.54
UBC-214ENST00000546271 UNC13AQ9UPW8 1703 aa24.58■■□□□ 1.52
UBC-214ENST00000546271 MYO15BQ96JP2 1530 aa24.5■■□□□ 1.51
UBC-214ENST00000546271 ZCCHC6Q5VYS8 1495 aaKnown RBP24.45■■□□□ 1.5
UBC-214ENST00000546271 DCAF1Q9Y4B6 1507 aa24.3■■□□□ 1.48
UBC-214ENST00000546271 PABPN1Q86U42 306 aaKnown RBP eCLIP24.28■■□□□ 1.48
UBC-214ENST00000546271 BICRAQ9NZM4 1560 aa24.25■■□□□ 1.47
UBC-214ENST00000546271 DNAJC5BQ9UF47 199 aa24.16■■□□□ 1.46
UBC-214ENST00000546271 SCRIBQ14160 1630 aa24.13■■□□□ 1.45
UBC-214ENST00000546271 SHROOM4Q9ULL8 1493 aa23.91■■□□□ 1.42
UBC-214ENST00000546271 CC2D2AQ9P2K1 1620 aa23.67■■□□□ 1.38
UBC-214ENST00000546271 EIF4G1Q04637 1599 aaKnown RBP23.65■■□□□ 1.38
UBC-214ENST00000546271 CECR2Q9BXF3 1484 aa23.5■■□□□ 1.35
UBC-214ENST00000546271 SMARCA4P51532 1647 aa22.99■■□□□ 1.27
UBC-214ENST00000546271 SMARCA2P51531 1590 aa22.86■■□□□ 1.25
UBC-214ENST00000546271 BAZ1AQ9NRL2 1556 aaPredicted RBP22.86■■□□□ 1.25
UBC-214ENST00000546271 ATAD2BQ9ULI0 1458 aa22.85■■□□□ 1.25
UBC-214ENST00000546271 NCAPD3P42695 1498 aa22.84■■□□□ 1.25
UBC-214ENST00000546271 HMGXB3Q12766 1538 aa22.8■■□□□ 1.24
UBC-214ENST00000546271 BAZ1BQ9UIG0 1483 aaKnown RBP22.7■■□□□ 1.22
UBC-214ENST00000546271 MROH2BQ7Z745 1585 aa22.69■■□□□ 1.22
UBC-214ENST00000546271 PEG3Q9GZU2 1588 aa22.68■■□□□ 1.22
UBC-214ENST00000546271 ERCC6Q03468 1493 aa22.59■■□□□ 1.21
UBC-214ENST00000546271 NESP48681 1621 aa22.51■■□□□ 1.19
UBC-214ENST00000546271 WIZO95785 1651 aa22.5■■□□□ 1.19
UBC-214ENST00000546271 LAMC3Q9Y6N6 1575 aa22.42■■□□□ 1.18
UBC-214ENST00000546271 CUX2O14529 1486 aa22.42■■□□□ 1.18
UBC-214ENST00000546271 KIF21AQ7Z4S6 1674 aa22.37■■□□□ 1.17
UBC-214ENST00000546271 RSF1Q96T23 1441 aaPredicted RBP22.33■■□□□ 1.17
UBC-214ENST00000546271 THOC2Q8NI27 1593 aaKnown RBP22.33■■□□□ 1.16
UBC-214ENST00000546271 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
UBC-214ENST00000546271 PDS5BQ9NTI5 1447 aa22.2■■□□□ 1.14
UBC-214ENST00000546271 CADPSQ9ULU8 1353 aa22.15■■□□□ 1.14
UBC-214ENST00000546271 MRC2Q9UBG0 1479 aa22.06■■□□□ 1.12
UBC-214ENST00000546271 PRDM2Q13029 1718 aa22.04■■□□□ 1.12
UBC-214ENST00000546271 CEP164Q9UPV0 1460 aa22.03■■□□□ 1.12
UBC-214ENST00000546271 DNAJC5Q9H3Z4 198 aa22.03■■□□□ 1.12
UBC-214ENST00000546271 WDR62O43379 1518 aa22.01■■□□□ 1.11
UBC-214ENST00000546271 FANCD2Q9BXW9 1451 aa21.99■■□□□ 1.11
UBC-214ENST00000546271 CFTRP13569 1480 aa21.97■■□□□ 1.11
UBC-214ENST00000546271 CCDC88BA6NC98 1476 aa21.89■■□□□ 1.09
UBC-214ENST00000546271 URB2Q14146 1524 aaKnown RBP21.8■■□□□ 1.08
UBC-214ENST00000546271 SUPT5HO00267 1087 aaKnown RBP21.63■■□□□ 1.05
UBC-214ENST00000546271 TOPBP1Q92547 1522 aa21.6■■□□□ 1.05
UBC-214ENST00000546271 DNMBPQ6XZF7 1577 aa21.59■■□□□ 1.05
UBC-214ENST00000546271 ABCC8Q09428 1581 aa21.54■■□□□ 1.04
UBC-214ENST00000546271 IFT140Q96RY7 1462 aa21.53■■□□□ 1.04
UBC-214ENST00000546271 EIF4G3O43432 1585 aaKnown RBP21.5■■□□□ 1.03
UBC-214ENST00000546271 ZNF608Q9ULD9 1512 aaPredicted RBP21.49■■□□□ 1.03
UBC-214ENST00000546271 TARBP1Q13395 1621 aaKnown RBP21.44■■□□□ 1.02
UBC-214ENST00000546271 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.01
UBC-214ENST00000546271 CHD1O14646 1710 aa21.35■■□□□ 1.01
UBC-214ENST00000546271 CUX1P39880 1505 aa21.33■■□□□ 1
UBC-214ENST00000546271 OSCARQ8IYS5 282 aa21.32■■□□□ 1
UBC-214ENST00000546271 FGD5Q6ZNL6 1462 aa21.32■■□□□ 1
UBC-214ENST00000546271 RAD54L2Q9Y4B4 1467 aa21.3■■□□□ 1
UBC-214ENST00000546271 AQRO60306 1485 aaKnown RBP eCLIP21.29■■□□□ 18e-18■■■■■ 28.7
UBC-214ENST00000546271 TRIM41Q8WV44 630 aa21.29■■□□□ 1
UBC-214ENST00000546271 WDR97A6NE52 1622 aa21.26■□□□□ 0.99
UBC-214ENST00000546271 SOGA1O94964 1423 aa21.25■□□□□ 0.99
UBC-214ENST00000546271 RIMBP3CA6NJZ7 1639 aa21.22■□□□□ 0.99
UBC-214ENST00000546271 RIMBP3BA6NNM3 1639 aa21.22■□□□□ 0.99
UBC-214ENST00000546271 RIMBP3Q9UFD9 1639 aa21.22■□□□□ 0.99
UBC-214ENST00000546271 PBRM1Q86U86 1689 aa21.2■□□□□ 0.98
UBC-214ENST00000546271 TDRD9Q8NDG6 1382 aaKnown RBP21.17■□□□□ 0.98
UBC-214ENST00000546271 SNAPC4Q5SXM2 1469 aa21.15■□□□□ 0.98
UBC-214ENST00000546271 FBLN2P98095 1184 aa21.12■□□□□ 0.97
UBC-214ENST00000546271 ARHGEF11O15085 1522 aa21.12■□□□□ 0.97
UBC-214ENST00000546271 BIVM-ERCC5R4GMW8 1640 aa21.11■□□□□ 0.97
UBC-214ENST00000546271 ABCA5Q8WWZ7 1642 aa21.09■□□□□ 0.97
UBC-214ENST00000546271 GRIN2BQ13224 1484 aa21.08■□□□□ 0.97
UBC-214ENST00000546271 MAGI1Q96QZ7 1491 aaPredicted RBP21.07■□□□□ 0.96
UBC-214ENST00000546271 SYNJ1O43426 1573 aa21.06■□□□□ 0.96
UBC-214ENST00000546271 TOP2BQ02880 1626 aa21.06■□□□□ 0.96
UBC-214ENST00000546271 WRNQ14191 1432 aaPredicted RBP eCLIP21.05■□□□□ 0.969e-6■■■■■ 50.1
UBC-214ENST00000546271 ABCA10Q8WWZ4 1543 aa21.04■□□□□ 0.96
UBC-214ENST00000546271 GAPVD1Q14C86 1478 aa21.03■□□□□ 0.96
UBC-214ENST00000546271 SYNJ2O15056 1496 aa20.99■□□□□ 0.95
UBC-214ENST00000546271 CLASP1Q7Z460 1538 aa20.99■□□□□ 0.95
UBC-214ENST00000546271 CHMP7Q8WUX9 453 aaPredicted RBP20.95■□□□□ 0.94
UBC-214ENST00000546271 ADAMTS12P58397 1594 aa20.93■□□□□ 0.94
UBC-214ENST00000546271 ARAP1Q96P48 1450 aa20.91■□□□□ 0.94
UBC-214ENST00000546271 CYB5RLQ6IPT4 315 aa20.85■□□□□ 0.93
UBC-214ENST00000546271 GRIN2AQ12879 1464 aa20.82■□□□□ 0.92
UBC-214ENST00000546271 ERICH3Q5RHP9 1530 aa20.81■□□□□ 0.92
UBC-214ENST00000546271 CEP170Q5SW79 1584 aa20.8■□□□□ 0.92
UBC-214ENST00000546271 FHAD1B1AJZ9 1412 aa20.76■□□□□ 0.91
UBC-214ENST00000546271 NUP160Q12769 1436 aa20.7■□□□□ 0.9
UBC-214ENST00000546271 ERCC6L2Q5T890 1561 aa20.68■□□□□ 0.9
UBC-214ENST00000546271 SHROOM2Q13796 1616 aa20.67■□□□□ 0.9
UBC-214ENST00000546271 CUL7Q14999 1698 aa20.64■□□□□ 0.9
UBC-214ENST00000546271 RUSC2Q8N2Y8 1516 aa20.64■□□□□ 0.9
UBC-214ENST00000546271 KIF27Q86VH2 1401 aa20.62■□□□□ 0.89
UBC-214ENST00000546271 TRHP20396 242 aaPredicted RBP20.6■□□□□ 0.89
UBC-214ENST00000546271 IGF1RP08069 1367 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms