RNA–Protein interactions for RNA: ENST00000295925.5

CCNL1-201, Transcript of cyclin L1, humanhuman

TSL 1 (best) BASIC

Gene CCNL1, Length 549 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-201ENST00000295925 NISCHQ9Y2I1 1504 aa39.49■■■■□ 3.91
CCNL1-201ENST00000295925 CCDC180Q9P1Z9 1646 aa35.06■■■■□ 3.2
CCNL1-201ENST00000295925 ABCC9O60706 1549 aa34.19■■■■□ 3.06
CCNL1-201ENST00000295925 DCAF8L2P0C7V8 631 aa32.99■■■□□ 2.87
CCNL1-201ENST00000295925 ZCCHC6Q5VYS8 1495 aaKnown RBP32.94■■■□□ 2.86
CCNL1-201ENST00000295925 RB1CC1Q8TDY2 1594 aa32.9■■■□□ 2.86
CCNL1-201ENST00000295925 NACADO15069 1562 aa32.87■■■□□ 2.85
CCNL1-201ENST00000295925 MYO15BQ96JP2 1530 aa32.67■■■□□ 2.82
CCNL1-201ENST00000295925 DCAF1Q9Y4B6 1507 aa32.61■■■□□ 2.81
CCNL1-201ENST00000295925 UNC13AQ9UPW8 1703 aa32.26■■■□□ 2.76
CCNL1-201ENST00000295925 SCRIBQ14160 1630 aa32.09■■■□□ 2.73
CCNL1-201ENST00000295925 PABPN1Q86U42 306 aaKnown RBP eCLIP31.96■■■□□ 2.71
CCNL1-201ENST00000295925 BICRAQ9NZM4 1560 aa31.92■■■□□ 2.7
CCNL1-201ENST00000295925 SHROOM4Q9ULL8 1493 aa31.49■■■□□ 2.63
CCNL1-201ENST00000295925 DNAJC5BQ9UF47 199 aa31.16■■■□□ 2.58
CCNL1-201ENST00000295925 EIF4G1Q04637 1599 aaKnown RBP31.07■■■□□ 2.56
CCNL1-201ENST00000295925 CC2D2AQ9P2K1 1620 aa30.92■■■□□ 2.54
CCNL1-201ENST00000295925 CECR2Q9BXF3 1484 aa30.79■■■□□ 2.52
CCNL1-201ENST00000295925 SMARCA4P51532 1647 aa30.65■■■□□ 2.5
CCNL1-201ENST00000295925 BAZ1AQ9NRL2 1556 aaPredicted RBP30.6■■■□□ 2.49
CCNL1-201ENST00000295925 MROH2BQ7Z745 1585 aa30.48■■■□□ 2.47
CCNL1-201ENST00000295925 ATAD2BQ9ULI0 1458 aa30.38■■■□□ 2.45
CCNL1-201ENST00000295925 SMARCA2P51531 1590 aa30.37■■■□□ 2.45
CCNL1-201ENST00000295925 NCAPD3P42695 1498 aa30.31■■■□□ 2.44
CCNL1-201ENST00000295925 PEG3Q9GZU2 1588 aa30.28■■■□□ 2.44
CCNL1-201ENST00000295925 HMGXB3Q12766 1538 aa30.22■■■□□ 2.43
CCNL1-201ENST00000295925 WIZO95785 1651 aa30.2■■■□□ 2.43
CCNL1-201ENST00000295925 BAZ1BQ9UIG0 1483 aaKnown RBP30.19■■■□□ 2.42
CCNL1-201ENST00000295925 RSF1Q96T23 1441 aaPredicted RBP30.14■■■□□ 2.42
CCNL1-201ENST00000295925 TOP2AP11388 1531 aaKnown RBP29.84■■■□□ 2.37
CCNL1-201ENST00000295925 NESP48681 1621 aa29.63■■■□□ 2.33
CCNL1-201ENST00000295925 SUPT5HO00267 1087 aaKnown RBP29.59■■■□□ 2.33
CCNL1-201ENST00000295925 LAMC3Q9Y6N6 1575 aa29.52■■■□□ 2.32
CCNL1-201ENST00000295925 CCDC88BA6NC98 1476 aa29.48■■■□□ 2.31
CCNL1-201ENST00000295925 ERCC6Q03468 1493 aa29.44■■■□□ 2.3
CCNL1-201ENST00000295925 CADPSQ9ULU8 1353 aa29.44■■■□□ 2.3
CCNL1-201ENST00000295925 KIF21AQ7Z4S6 1674 aa29.34■■■□□ 2.29
CCNL1-201ENST00000295925 CFTRP13569 1480 aa29.31■■■□□ 2.28
CCNL1-201ENST00000295925 PDS5BQ9NTI5 1447 aa29.29■■■□□ 2.28
CCNL1-201ENST00000295925 PRDM2Q13029 1718 aa29.23■■■□□ 2.27
CCNL1-201ENST00000295925 FANCD2Q9BXW9 1451 aa29.16■■■□□ 2.26
CCNL1-201ENST00000295925 THOC2Q8NI27 1593 aaKnown RBP29.14■■■□□ 2.26
CCNL1-201ENST00000295925 CEP164Q9UPV0 1460 aa29.11■■■□□ 2.25
CCNL1-201ENST00000295925 MRC2Q9UBG0 1479 aa29.04■■■□□ 2.24
CCNL1-201ENST00000295925 CUX2O14529 1486 aa28.99■■■□□ 2.23
CCNL1-201ENST00000295925 WDR62O43379 1518 aa28.93■■■□□ 2.22
CCNL1-201ENST00000295925 URB2Q14146 1524 aaKnown RBP28.87■■■□□ 2.21
CCNL1-201ENST00000295925 TOPBP1Q92547 1522 aa28.72■■■□□ 2.19
CCNL1-201ENST00000295925 DNMBPQ6XZF7 1577 aa28.71■■■□□ 2.19
CCNL1-201ENST00000295925 ABCC8Q09428 1581 aa28.65■■■□□ 2.18
CCNL1-201ENST00000295925 CUX1P39880 1505 aa28.59■■■□□ 2.17
CCNL1-201ENST00000295925 POLA1P09884 1462 aaPredicted RBP28.48■■■□□ 2.15
CCNL1-201ENST00000295925 FGD5Q6ZNL6 1462 aa28.46■■■□□ 2.15
CCNL1-201ENST00000295925 IFT140Q96RY7 1462 aa28.46■■■□□ 2.15
CCNL1-201ENST00000295925 WRNQ14191 1432 aaPredicted RBP eCLIP28.43■■■□□ 2.142e-6■■■■□ 22.3
CCNL1-201ENST00000295925 SYNJ1O43426 1573 aa28.42■■■□□ 2.14
CCNL1-201ENST00000295925 TARBP1Q13395 1621 aaKnown RBP28.4■■■□□ 2.14
CCNL1-201ENST00000295925 BIVM-ERCC5R4GMW8 1640 aa28.39■■■□□ 2.13
CCNL1-201ENST00000295925 RAD54L2Q9Y4B4 1467 aa28.39■■■□□ 2.13
CCNL1-201ENST00000295925 ZNF608Q9ULD9 1512 aaPredicted RBP28.38■■■□□ 2.13
CCNL1-201ENST00000295925 TOP2BQ02880 1626 aa28.37■■■□□ 2.13
CCNL1-201ENST00000295925 SOGA1O94964 1423 aa28.35■■■□□ 2.13
CCNL1-201ENST00000295925 EIF4G3O43432 1585 aaKnown RBP28.3■■■□□ 2.12
CCNL1-201ENST00000295925 WDR97A6NE52 1622 aa28.25■■■□□ 2.11
CCNL1-201ENST00000295925 AQRO60306 1485 aaKnown RBP eCLIP28.22■■■□□ 2.119e-9■■■■■ 46.1
CCNL1-201ENST00000295925 TDRD9Q8NDG6 1382 aaKnown RBP28.2■■■□□ 2.1
CCNL1-201ENST00000295925 ABCA10Q8WWZ4 1543 aa28.14■■■□□ 2.1
CCNL1-201ENST00000295925 ABCA5Q8WWZ7 1642 aa28.07■■■□□ 2.08
CCNL1-201ENST00000295925 PBRM1Q86U86 1689 aa28.06■■■□□ 2.08
CCNL1-201ENST00000295925 GAPVD1Q14C86 1478 aa28.04■■■□□ 2.08
CCNL1-201ENST00000295925 GRIN2BQ13224 1484 aa28■■■□□ 2.07
CCNL1-201ENST00000295925 SNAPC4Q5SXM2 1469 aa27.98■■■□□ 2.07
CCNL1-201ENST00000295925 CHD1O14646 1710 aa27.95■■■□□ 2.07
CCNL1-201ENST00000295925 MAGI1Q96QZ7 1491 aaPredicted RBP27.9■■■□□ 2.06
CCNL1-201ENST00000295925 TRIM41Q8WV44 630 aa27.89■■■□□ 2.06
CCNL1-201ENST00000295925 FBLN2P98095 1184 aa27.87■■■□□ 2.05
CCNL1-201ENST00000295925 DNAJC5Q9H3Z4 198 aa27.87■■■□□ 2.05
CCNL1-201ENST00000295925 KIF27Q86VH2 1401 aa27.82■■■□□ 2.04
CCNL1-201ENST00000295925 OSCARQ8IYS5 282 aa27.81■■■□□ 2.04
CCNL1-201ENST00000295925 ERICH3Q5RHP9 1530 aa27.81■■■□□ 2.04
CCNL1-201ENST00000295925 ADAMTS12P58397 1594 aa27.81■■■□□ 2.04
CCNL1-201ENST00000295925 SYNJ2O15056 1496 aa27.8■■■□□ 2.04
CCNL1-201ENST00000295925 CHMP7Q8WUX9 453 aaPredicted RBP27.77■■■□□ 2.04
CCNL1-201ENST00000295925 FHAD1B1AJZ9 1412 aa27.69■■■□□ 2.02
CCNL1-201ENST00000295925 RUSC2Q8N2Y8 1516 aa27.68■■■□□ 2.02
CCNL1-201ENST00000295925 GRIN2AQ12879 1464 aa27.66■■■□□ 2.02
CCNL1-201ENST00000295925 IGF1RP08069 1367 aa27.65■■■□□ 2.02
CCNL1-201ENST00000295925 CHIC1Q5VXU3 224 aa27.65■■■□□ 2.02
CCNL1-201ENST00000295925 CUL7Q14999 1698 aa27.64■■■□□ 2.02
CCNL1-201ENST00000295925 CLASP1Q7Z460 1538 aa27.57■■■□□ 2
CCNL1-201ENST00000295925 CEP170Q5SW79 1584 aa27.56■■■□□ 2
CCNL1-201ENST00000295925 CARMIL1Q5VZK9 1371 aa27.51■■□□□ 1.99
CCNL1-201ENST00000295925 NUP160Q12769 1436 aa27.5■■□□□ 1.99
CCNL1-201ENST00000295925 RIMBP3CA6NJZ7 1639 aa27.45■■□□□ 1.98
CCNL1-201ENST00000295925 RIMBP3BA6NNM3 1639 aa27.45■■□□□ 1.98
CCNL1-201ENST00000295925 RIMBP3Q9UFD9 1639 aa27.45■■□□□ 1.98
CCNL1-201ENST00000295925 ARHGEF11O15085 1522 aa27.42■■□□□ 1.98
CCNL1-201ENST00000295925 FAM9AQ8IZU1 332 aaPredicted RBP27.39■■□□□ 1.98
CCNL1-201ENST00000295925 RAPGEF2Q9Y4G8 1499 aa27.38■■□□□ 1.97
CCNL1-201ENST00000295925 EEA1Q15075 1411 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms