RNA–Protein interactions for RNA: ENST00000467081.1

CCNL1-209, Transcript of cyclin L1, humanhuman

TSL 3

Gene CCNL1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-209ENST00000467081 AEBP2Q6ZN18 517 aaPredicted RBP32.07■■■□□ 2.72
CCNL1-209ENST00000467081 CHIC1Q5VXU3 224 aa31.2■■■□□ 2.59
CCNL1-209ENST00000467081 PHF23Q9BUL5 403 aaPredicted RBP27.44■■□□□ 1.98
CCNL1-209ENST00000467081 SENP3Q9H4L4 574 aaPredicted RBP27.21■■□□□ 1.95
CCNL1-209ENST00000467081 PLPPR3Q6T4P5 718 aa25.3■■□□□ 1.64
CCNL1-209ENST00000467081 FOXD1Q16676 465 aa25.29■■□□□ 1.64
CCNL1-209ENST00000467081 ADRA2BP18089 450 aa24.26■■□□□ 1.47
CCNL1-209ENST00000467081 PPP6R1Q9UPN7 881 aa24.26■■□□□ 1.47
CCNL1-209ENST00000467081 PIAS4Q8N2W9 510 aaPredicted RBP23.85■■□□□ 1.41
CCNL1-209ENST00000467081 MSH5O43196 834 aa23.34■■□□□ 1.33
CCNL1-209ENST00000467081 PPP4R3CPQ6ZMV5 832 aa22.3■■□□□ 1.16
CCNL1-209ENST00000467081 SCAF1Q9H7N4 1312 aaKnown RBP22.16■■□□□ 1.14
CCNL1-209ENST00000467081 MAPK8IP2Q13387 824 aaPredicted RBP22.04■■□□□ 1.12
CCNL1-209ENST00000467081 DMRT2Q9Y5R5 561 aa21.7■■□□□ 1.06
CCNL1-209ENST00000467081 KCNA4P22459 653 aa21.69■■□□□ 1.06
CCNL1-209ENST00000467081 CNKSR2Q8WXI2 1034 aa21.68■■□□□ 1.06
CCNL1-209ENST00000467081 NCBP3Q53F19 620 aaKnown RBP21.67■■□□□ 1.06
CCNL1-209ENST00000467081 POTEDQ86YR6 584 aa21.45■■□□□ 1.02
CCNL1-209ENST00000467081 NPM3O75607 178 aaKnown RBP21.37■■□□□ 1.01
CCNL1-209ENST00000467081 RNF216Q9NWF9 866 aaPredicted RBP21.27■■□□□ 1
CCNL1-209ENST00000467081 HOXD11P31277 338 aaPredicted RBP21.2■□□□□ 0.98
CCNL1-209ENST00000467081 DCAF8L1A6NGE4 600 aa20.85■□□□□ 0.93
CCNL1-209ENST00000467081 DNAJC5BQ9UF47 199 aa20.66■□□□□ 0.9
CCNL1-209ENST00000467081 SLC4A1APQ9BWU0 796 aaKnown RBP20.63■□□□□ 0.89
CCNL1-209ENST00000467081 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.26■□□□□ 0.832e-9■■□□□ 14.3
CCNL1-209ENST00000467081 SLC4A2P04920 1241 aa20.2■□□□□ 0.82
CCNL1-209ENST00000467081 RNF39Q9H2S5 420 aa19.99■□□□□ 0.79
CCNL1-209ENST00000467081 EHMT2Q96KQ7 1210 aa19.97■□□□□ 0.79
CCNL1-209ENST00000467081 FOXD4L1Q9NU39 408 aa19.96■□□□□ 0.79
CCNL1-209ENST00000467081 ZBTB22O15209 634 aa19.94■□□□□ 0.78
CCNL1-209ENST00000467081 U3KPZ7 1027 aaPredicted RBP19.91■□□□□ 0.78
CCNL1-209ENST00000467081 MYCNP04198 464 aaPredicted RBP19.74■□□□□ 0.75
CCNL1-209ENST00000467081 CSRNP3Q8WYN3 585 aa19.74■□□□□ 0.75
CCNL1-209ENST00000467081 C1QBPQ07021 282 aaKnown RBP19.73■□□□□ 0.75
CCNL1-209ENST00000467081 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.59■□□□□ 0.73
CCNL1-209ENST00000467081 HNRNPUL2Q1KMD3 747 aaKnown RBP19.59■□□□□ 0.73
CCNL1-209ENST00000467081 CACNB1Q02641 598 aaPredicted RBP19.58■□□□□ 0.72
CCNL1-209ENST00000467081 SAMD1Q6SPF0 538 aaPredicted RBP19.52■□□□□ 0.72
CCNL1-209ENST00000467081 APLP2Q06481 763 aa19.42■□□□□ 0.7
CCNL1-209ENST00000467081 SPINK5Q9NQ38 1064 aaPredicted RBP19.4■□□□□ 0.7
CCNL1-209ENST00000467081 CAPN15O75808 1086 aa19.34■□□□□ 0.69
CCNL1-209ENST00000467081 ATF5Q9Y2D1 282 aaPredicted RBP19.25■□□□□ 0.67
CCNL1-209ENST00000467081 ATXN8OSP0DMR3 200 aa19.24■□□□□ 0.67
CCNL1-209ENST00000467081 TRHP20396 242 aaPredicted RBP19.23■□□□□ 0.67
CCNL1-209ENST00000467081 ZNF219Q9P2Y4 722 aaPredicted RBP19.17■□□□□ 0.66
CCNL1-209ENST00000467081 DSG3P32926 999 aa19■□□□□ 0.63
CCNL1-209ENST00000467081 ABCB7O75027 752 aa18.97■□□□□ 0.63
CCNL1-209ENST00000467081 POLA2Q14181 598 aa18.88■□□□□ 0.61
CCNL1-209ENST00000467081 ZBTB12Q9Y330 459 aaPredicted RBP18.51■□□□□ 0.55
CCNL1-209ENST00000467081 FBLN2P98095 1184 aa18.44■□□□□ 0.54
CCNL1-209ENST00000467081 MKRN4PQ13434 485 aaPredicted RBP18.39■□□□□ 0.53
CCNL1-209ENST00000467081 OSCARQ8IYS5 282 aa18.24■□□□□ 0.51
CCNL1-209ENST00000467081 RBM42Q9BTD8 480 aaKnown RBP18.09■□□□□ 0.49
CCNL1-209ENST00000467081 SPDYE2BA6NHP3 402 aa18.01■□□□□ 0.47
CCNL1-209ENST00000467081 SPDYE6P0CI01 402 aa18.01■□□□□ 0.47
CCNL1-209ENST00000467081 SPDYE2Q495Y8 402 aa18.01■□□□□ 0.47
CCNL1-209ENST00000467081 ZNF692Q9BU19 519 aaPredicted RBP17.97■□□□□ 0.47
CCNL1-209ENST00000467081 SPDYE4A6NLX3 237 aa17.94■□□□□ 0.46
CCNL1-209ENST00000467081 FKBP8Q14318 412 aa17.88■□□□□ 0.45
CCNL1-209ENST00000467081 AKT1S1Q96B36 256 aa17.85■□□□□ 0.45
CCNL1-209ENST00000467081 SSUH2Q9Y2M2 353 aa17.85■□□□□ 0.45
CCNL1-209ENST00000467081 PABPN1Q86U42 306 aaKnown RBP eCLIP17.73■□□□□ 0.43
CCNL1-209ENST00000467081 REM2Q8IYK8 340 aaPredicted RBP17.7■□□□□ 0.42
CCNL1-209ENST00000467081 PROM2Q8N271 834 aa17.57■□□□□ 0.4
CCNL1-209ENST00000467081 SPDYE1Q8NFV5 336 aaPredicted RBP17.52■□□□□ 0.4
CCNL1-209ENST00000467081 PITPNM1O00562 1244 aa17.51■□□□□ 0.39
CCNL1-209ENST00000467081 CLEC11AQ9Y240 323 aa17.5■□□□□ 0.39
CCNL1-209ENST00000467081 CHRDL2Q6WN34 429 aa17.4■□□□□ 0.38
CCNL1-209ENST00000467081 STAG3Q9UJ98 1225 aa17.37■□□□□ 0.37
CCNL1-209ENST00000467081 PRR29P0C7W0 189 aa17.3■□□□□ 0.36
CCNL1-209ENST00000467081 FBXO3Q9UK99 471 aa17.24■□□□□ 0.35
CCNL1-209ENST00000467081 FXR2P51116 673 aaKnown RBP eCLIP17.17■□□□□ 0.34
CCNL1-209ENST00000467081 PIP4P2Q8N4L2 257 aa17.16■□□□□ 0.34
CCNL1-209ENST00000467081 PRKAR2AP13861 404 aaKnown RBP17.08■□□□□ 0.32
CCNL1-209ENST00000467081 CHADLQ6NUI6 762 aa17.07■□□□□ 0.32
CCNL1-209ENST00000467081 MIER1Q8N108 512 aa17.04■□□□□ 0.32
CCNL1-209ENST00000467081 CREBZFQ9NS37 354 aa17.04■□□□□ 0.32
CCNL1-209ENST00000467081 VASPP50552 380 aaPredicted RBP17.02■□□□□ 0.32
CCNL1-209ENST00000467081 PLCD3Q8N3E9 789 aa17■□□□□ 0.31
CCNL1-209ENST00000467081 POTEHQ6S545 545 aa16.97■□□□□ 0.31
CCNL1-209ENST00000467081 PLEKHG5O94827 1062 aa16.94■□□□□ 0.3
CCNL1-209ENST00000467081 FARP1Q9Y4F1 1045 aaPredicted RBP16.87■□□□□ 0.29
CCNL1-209ENST00000467081 MNX1P50219 401 aaPredicted RBP16.83■□□□□ 0.28
CCNL1-209ENST00000467081 KLHL34Q8N239 644 aa16.79■□□□□ 0.28
CCNL1-209ENST00000467081 IFNLR1Q8IU57 520 aaPredicted RBP16.78■□□□□ 0.28
CCNL1-209ENST00000467081 ZBTB47Q9UFB7 747 aaPredicted RBP16.78■□□□□ 0.28
CCNL1-209ENST00000467081 NPM1P06748 294 aaKnown RBP eCLIP16.75■□□□□ 0.27
CCNL1-209ENST00000467081 HAX1O00165 279 aa16.67■□□□□ 0.26
CCNL1-209ENST00000467081 SPOCK2Q92563 424 aa16.6■□□□□ 0.25
CCNL1-209ENST00000467081 C19orf67A6NJJ6 358 aa16.59■□□□□ 0.25
CCNL1-209ENST00000467081 CD44P16070 742 aaKnown RBP16.58■□□□□ 0.24
CCNL1-209ENST00000467081 NUBP1P53384 320 aa16.58■□□□□ 0.24
CCNL1-209ENST00000467081 RASEFQ8IZ41 740 aa16.56■□□□□ 0.24
CCNL1-209ENST00000467081 PAK3O75914 559 aaPredicted RBP16.51■□□□□ 0.23
CCNL1-209ENST00000467081 EVX2Q03828 476 aa16.51■□□□□ 0.23
CCNL1-209ENST00000467081 TSPYL2Q9H2G4 693 aaPredicted RBP16.51■□□□□ 0.23
CCNL1-209ENST00000467081 ZRANB1Q9UGI0 708 aa16.48■□□□□ 0.23
CCNL1-209ENST00000467081 FAM212AQ96EL1 285 aa16.46■□□□□ 0.23
CCNL1-209ENST00000467081 DCAF8Q5TAQ9 597 aa16.45■□□□□ 0.22
CCNL1-209ENST00000467081 CIZ1Q9ULV3 898 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms