RNA–Protein interactions for RNA: ENST00000485541.1

SRRM1-214, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-214ENST00000485541 AEBP2Q6ZN18 517 aaPredicted RBP19.43■□□□□ 0.7
SRRM1-214ENST00000485541 CHIC1Q5VXU3 224 aa18.09■□□□□ 0.49
SRRM1-214ENST00000485541 NISCHQ9Y2I1 1504 aa17.66■□□□□ 0.42
SRRM1-214ENST00000485541 SENP3Q9H4L4 574 aaPredicted RBP16.63■□□□□ 0.25
SRRM1-214ENST00000485541 PHF23Q9BUL5 403 aaPredicted RBP16.34■□□□□ 0.21
SRRM1-214ENST00000485541 FOXD1Q16676 465 aa15.6■□□□□ 0.09
SRRM1-214ENST00000485541 POTEDQ86YR6 584 aa15.56■□□□□ 0.08
SRRM1-214ENST00000485541 CCDC180Q9P1Z9 1646 aa15.52■□□□□ 0.08
SRRM1-214ENST00000485541 ZCCHC6Q5VYS8 1495 aaKnown RBP14.89□□□□□ -0.03
SRRM1-214ENST00000485541 MSH5O43196 834 aa14.81□□□□□ -0.04
SRRM1-214ENST00000485541 DCAF1Q9Y4B6 1507 aa14.75□□□□□ -0.05
SRRM1-214ENST00000485541 MYO15BQ96JP2 1530 aa14.54□□□□□ -0.08
SRRM1-214ENST00000485541 PIAS4Q8N2W9 510 aaPredicted RBP14.39□□□□□ -0.11
SRRM1-214ENST00000485541 PLPPR3Q6T4P5 718 aa14.33□□□□□ -0.12
SRRM1-214ENST00000485541 NACADO15069 1562 aa14.32□□□□□ -0.12
SRRM1-214ENST00000485541 SHROOM4Q9ULL8 1493 aa14.22□□□□□ -0.13
SRRM1-214ENST00000485541 DCAF8L2P0C7V8 631 aa14.19□□□□□ -0.14
SRRM1-214ENST00000485541 ABCC9O60706 1549 aa14.17□□□□□ -0.14
SRRM1-214ENST00000485541 RB1CC1Q8TDY2 1594 aa14.13□□□□□ -0.15
SRRM1-214ENST00000485541 PPP6R1Q9UPN7 881 aa14.13□□□□□ -0.15
SRRM1-214ENST00000485541 ADRA2BP18089 450 aa14.07□□□□□ -0.16
SRRM1-214ENST00000485541 SCRIBQ14160 1630 aa14.04□□□□□ -0.16
SRRM1-214ENST00000485541 UNC13AQ9UPW8 1703 aa13.91□□□□□ -0.18
SRRM1-214ENST00000485541 SUPT5HO00267 1087 aaKnown RBP13.78□□□□□ -0.2
SRRM1-214ENST00000485541 RSF1Q96T23 1441 aaPredicted RBP13.68□□□□□ -0.22
SRRM1-214ENST00000485541 BAZ1AQ9NRL2 1556 aaPredicted RBP13.67□□□□□ -0.22
SRRM1-214ENST00000485541 BICRAQ9NZM4 1560 aa13.63□□□□□ -0.23
SRRM1-214ENST00000485541 SMARCA4P51532 1647 aa13.57□□□□□ -0.24
SRRM1-214ENST00000485541 MROH2BQ7Z745 1585 aa13.57□□□□□ -0.24
SRRM1-214ENST00000485541 CECR2Q9BXF3 1484 aa13.56□□□□□ -0.24
SRRM1-214ENST00000485541 WIZO95785 1651 aa13.51□□□□□ -0.25
SRRM1-214ENST00000485541 PEG3Q9GZU2 1588 aa13.48□□□□□ -0.25
SRRM1-214ENST00000485541 TOP2AP11388 1531 aaKnown RBP13.44□□□□□ -0.26
SRRM1-214ENST00000485541 SMARCA2P51531 1590 aa13.34□□□□□ -0.27
SRRM1-214ENST00000485541 EIF4G1Q04637 1599 aaKnown RBP13.3□□□□□ -0.28
SRRM1-214ENST00000485541 PABPN1Q86U42 306 aaKnown RBP eCLIP13.27□□□□□ -0.29
SRRM1-214ENST00000485541 ATAD2BQ9ULI0 1458 aa13.23□□□□□ -0.29
SRRM1-214ENST00000485541 HMGXB3Q12766 1538 aa13.22□□□□□ -0.29
SRRM1-214ENST00000485541 CCDC88BA6NC98 1476 aa13.19□□□□□ -0.3
SRRM1-214ENST00000485541 BAZ1BQ9UIG0 1483 aaKnown RBP13.18□□□□□ -0.3
SRRM1-214ENST00000485541 NCAPD3P42695 1498 aa13.14□□□□□ -0.31
SRRM1-214ENST00000485541 CACNB1Q02641 598 aaPredicted RBP13.1□□□□□ -0.31
SRRM1-214ENST00000485541 DMRT2Q9Y5R5 561 aa13.1□□□□□ -0.31
SRRM1-214ENST00000485541 MAPK8IP2Q13387 824 aaPredicted RBP13.08□□□□□ -0.32
SRRM1-214ENST00000485541 PRDM2Q13029 1718 aa13.08□□□□□ -0.32
SRRM1-214ENST00000485541 TRIM41Q8WV44 630 aa13.04□□□□□ -0.32
SRRM1-214ENST00000485541 CC2D2AQ9P2K1 1620 aa12.95□□□□□ -0.34
SRRM1-214ENST00000485541 ABCC8Q09428 1581 aa12.94□□□□□ -0.34
SRRM1-214ENST00000485541 EEA1Q15075 1411 aa12.94□□□□□ -0.34
SRRM1-214ENST00000485541 BIVM-ERCC5R4GMW8 1640 aa12.91□□□□□ -0.34
SRRM1-214ENST00000485541 WRNQ14191 1432 aaPredicted RBP eCLIP12.9□□□□□ -0.34
SRRM1-214ENST00000485541 SCAF1Q9H7N4 1312 aaKnown RBP12.88□□□□□ -0.35
SRRM1-214ENST00000485541 CFTRP13569 1480 aa12.88□□□□□ -0.35
SRRM1-214ENST00000485541 TOP2BQ02880 1626 aa12.88□□□□□ -0.35
SRRM1-214ENST00000485541 SYNJ1O43426 1573 aa12.85□□□□□ -0.35
SRRM1-214ENST00000485541 KIF21BO75037 1637 aa12.76□□□□□ -0.37
SRRM1-214ENST00000485541 CADPSQ9ULU8 1353 aa12.75□□□□□ -0.37
SRRM1-214ENST00000485541 LAMC3Q9Y6N6 1575 aa12.74□□□□□ -0.37
SRRM1-214ENST00000485541 LOC105371045A0A1W2PR82 267 aa12.74□□□□□ -0.37
SRRM1-214ENST00000485541 CUX1P39880 1505 aa12.7□□□□□ -0.38
SRRM1-214ENST00000485541 SOGA1O94964 1423 aa12.69□□□□□ -0.38
SRRM1-214ENST00000485541 GOLGA3Q08378 1498 aa12.68□□□□□ -0.38
SRRM1-214ENST00000485541 CEP164Q9UPV0 1460 aa12.68□□□□□ -0.38
SRRM1-214ENST00000485541 FAM9AQ8IZU1 332 aaPredicted RBP12.65□□□□□ -0.38
SRRM1-214ENST00000485541 CSRNP3Q8WYN3 585 aa12.65□□□□□ -0.38
SRRM1-214ENST00000485541 ERICH3Q5RHP9 1530 aa12.65□□□□□ -0.38
SRRM1-214ENST00000485541 TNIKQ9UKE5 1360 aa12.65□□□□□ -0.38
SRRM1-214ENST00000485541 DNMBPQ6XZF7 1577 aa12.63□□□□□ -0.39
SRRM1-214ENST00000485541 FANCD2Q9BXW9 1451 aa12.61□□□□□ -0.39
SRRM1-214ENST00000485541 RNF39Q9H2S5 420 aa12.61□□□□□ -0.39
SRRM1-214ENST00000485541 RUSC2Q8N2Y8 1516 aa12.61□□□□□ -0.39
SRRM1-214ENST00000485541 KIF27Q86VH2 1401 aa12.59□□□□□ -0.39
SRRM1-214ENST00000485541 PPP4R3CPQ6ZMV5 832 aa12.56□□□□□ -0.4
SRRM1-214ENST00000485541 PRXQ9BXM0 1461 aa12.55□□□□□ -0.4
SRRM1-214ENST00000485541 CEP162Q5TB80 1403 aa12.54□□□□□ -0.4
SRRM1-214ENST00000485541 PDS5BQ9NTI5 1447 aa12.54□□□□□ -0.4
SRRM1-214ENST00000485541 DCAF8L1A6NGE4 600 aa12.54□□□□□ -0.4
SRRM1-214ENST00000485541 WDR97A6NE52 1622 aa12.54□□□□□ -0.4
SRRM1-214ENST00000485541 FGD5Q6ZNL6 1462 aa12.53□□□□□ -0.4
SRRM1-214ENST00000485541 TOPBP1Q92547 1522 aa12.52□□□□□ -0.4
SRRM1-214ENST00000485541 KIF21AQ7Z4S6 1674 aa12.52□□□□□ -0.4
SRRM1-214ENST00000485541 ABCA10Q8WWZ4 1543 aa12.5□□□□□ -0.41
SRRM1-214ENST00000485541 NESP48681 1621 aa12.49□□□□□ -0.41
SRRM1-214ENST00000485541 CUL7Q14999 1698 aa12.48□□□□□ -0.41
SRRM1-214ENST00000485541 TRIM26Q12899 539 aaPredicted RBP12.48□□□□□ -0.41
SRRM1-214ENST00000485541 RAPGEF2Q9Y4G8 1499 aa12.47□□□□□ -0.41
SRRM1-214ENST00000485541 CUX2O14529 1486 aa12.46□□□□□ -0.42
SRRM1-214ENST00000485541 POLA1P09884 1462 aaPredicted RBP12.46□□□□□ -0.42
SRRM1-214ENST00000485541 UBTFP17480 764 aaKnown RBP12.44□□□□□ -0.42
SRRM1-214ENST00000485541 URB2Q14146 1524 aaKnown RBP12.43□□□□□ -0.42
SRRM1-214ENST00000485541 ABCA5Q8WWZ7 1642 aa12.42□□□□□ -0.42
SRRM1-214ENST00000485541 CLIP1P30622 1438 aa12.42□□□□□ -0.42
SRRM1-214ENST00000485541 HOXD11P31277 338 aaPredicted RBP12.39□□□□□ -0.43
SRRM1-214ENST00000485541 CTTNBP2Q8WZ74 1663 aa12.38□□□□□ -0.43
SRRM1-214ENST00000485541 VPS8Q8N3P4 1428 aa12.38□□□□□ -0.43
SRRM1-214ENST00000485541 PCGF6Q9BYE7 350 aa12.38□□□□□ -0.43
SRRM1-214ENST00000485541 MRC2Q9UBG0 1479 aa12.38□□□□□ -0.43
SRRM1-214ENST00000485541 TARBP1Q13395 1621 aaKnown RBP12.37□□□□□ -0.43
SRRM1-214ENST00000485541 C1QBPQ07021 282 aaKnown RBP12.37□□□□□ -0.43
SRRM1-214ENST00000485541 IGF1RP08069 1367 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms