RNA–Protein interactions for RNA: ENST00000416208.5

SCAP-203, Transcript of SREBF chaperone, humanhuman

TSL 5

Gene SCAP, Length 1,222 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-203ENST00000416208 NISCHQ9Y2I1 1504 aa47.29■■■■■ 5.16
SCAP-203ENST00000416208 CCDC180Q9P1Z9 1646 aa42.2■■■■■ 4.35
SCAP-203ENST00000416208 ABCC9O60706 1549 aa42■■■■■ 4.31
SCAP-203ENST00000416208 RB1CC1Q8TDY2 1594 aa40.01■■■■□ 3.99
SCAP-203ENST00000416208 NACADO15069 1562 aa39.84■■■■□ 3.97
SCAP-203ENST00000416208 DCAF8L2P0C7V8 631 aa39.73■■■■□ 3.95
SCAP-203ENST00000416208 MYO15BQ96JP2 1530 aa39.4■■■■□ 3.9
SCAP-203ENST00000416208 DNAJC5BQ9UF47 199 aa39.28■■■■□ 3.88
SCAP-203ENST00000416208 ZCCHC6Q5VYS8 1495 aaKnown RBP39.26■■■■□ 3.88
SCAP-203ENST00000416208 UNC13AQ9UPW8 1703 aa39.22■■■■□ 3.87
SCAP-203ENST00000416208 PABPN1Q86U42 306 aaKnown RBP eCLIP39.2■■■■□ 3.87
SCAP-203ENST00000416208 DCAF1Q9Y4B6 1507 aa39.03■■■■□ 3.84
SCAP-203ENST00000416208 BICRAQ9NZM4 1560 aa38.99■■■■□ 3.83
SCAP-203ENST00000416208 SCRIBQ14160 1630 aa38.55■■■■□ 3.76
SCAP-203ENST00000416208 SHROOM4Q9ULL8 1493 aa38.3■■■■□ 3.72
SCAP-203ENST00000416208 CC2D2AQ9P2K1 1620 aa37.94■■■■□ 3.66
SCAP-203ENST00000416208 EIF4G1Q04637 1599 aaKnown RBP37.93■■■■□ 3.66
SCAP-203ENST00000416208 CECR2Q9BXF3 1484 aa37.77■■■■□ 3.64
SCAP-203ENST00000416208 NCAPD3P42695 1498 aa36.83■■■■□ 3.49
SCAP-203ENST00000416208 SMARCA4P51532 1647 aa36.8■■■■□ 3.48
SCAP-203ENST00000416208 ATAD2BQ9ULI0 1458 aa36.79■■■■□ 3.48
SCAP-203ENST00000416208 BAZ1AQ9NRL2 1556 aaPredicted RBP36.61■■■■□ 3.45
SCAP-203ENST00000416208 SMARCA2P51531 1590 aa36.6■■■■□ 3.45
SCAP-203ENST00000416208 HMGXB3Q12766 1538 aa36.54■■■■□ 3.44
SCAP-203ENST00000416208 MROH2BQ7Z745 1585 aa36.49■■■■□ 3.43
SCAP-203ENST00000416208 PEG3Q9GZU2 1588 aa36.44■■■■□ 3.42
SCAP-203ENST00000416208 BAZ1BQ9UIG0 1483 aaKnown RBP36.37■■■■□ 3.41
SCAP-203ENST00000416208 NESP48681 1621 aa36.23■■■■□ 3.39
SCAP-203ENST00000416208 ERCC6Q03468 1493 aa36.13■■■■□ 3.37
SCAP-203ENST00000416208 WIZO95785 1651 aa36.05■■■■□ 3.36
SCAP-203ENST00000416208 CUX2O14529 1486 aa35.98■■■■□ 3.35
SCAP-203ENST00000416208 LAMC3Q9Y6N6 1575 aa35.88■■■■□ 3.33
SCAP-203ENST00000416208 RSF1Q96T23 1441 aaPredicted RBP35.84■■■■□ 3.33
SCAP-203ENST00000416208 THOC2Q8NI27 1593 aaKnown RBP35.73■■■■□ 3.31
SCAP-203ENST00000416208 CADPSQ9ULU8 1353 aa35.72■■■■□ 3.31
SCAP-203ENST00000416208 KIF21AQ7Z4S6 1674 aa35.7■■■■□ 3.31
SCAP-203ENST00000416208 DNAJC5Q9H3Z4 198 aa35.7■■■■□ 3.31
SCAP-203ENST00000416208 PDS5BQ9NTI5 1447 aa35.66■■■■□ 3.3
SCAP-203ENST00000416208 TOP2AP11388 1531 aaKnown RBP35.55■■■■□ 3.28
SCAP-203ENST00000416208 CFTRP13569 1480 aa35.4■■■■□ 3.26
SCAP-203ENST00000416208 MRC2Q9UBG0 1479 aa35.37■■■■□ 3.25
SCAP-203ENST00000416208 FANCD2Q9BXW9 1451 aa35.3■■■■□ 3.24
SCAP-203ENST00000416208 WDR62O43379 1518 aa35.29■■■■□ 3.24
SCAP-203ENST00000416208 CEP164Q9UPV0 1460 aa35.27■■■■□ 3.24
SCAP-203ENST00000416208 CCDC88BA6NC98 1476 aa35.21■■■■□ 3.23
SCAP-203ENST00000416208 URB2Q14146 1524 aaKnown RBP35.06■■■■□ 3.2
SCAP-203ENST00000416208 PRDM2Q13029 1718 aa34.98■■■■□ 3.19
SCAP-203ENST00000416208 TOPBP1Q92547 1522 aa34.69■■■■□ 3.14
SCAP-203ENST00000416208 ZNF608Q9ULD9 1512 aaPredicted RBP34.6■■■■□ 3.13
SCAP-203ENST00000416208 IFT140Q96RY7 1462 aa34.56■■■■□ 3.12
SCAP-203ENST00000416208 DNMBPQ6XZF7 1577 aa34.56■■■■□ 3.12
SCAP-203ENST00000416208 ABCC8Q09428 1581 aa34.52■■■■□ 3.12
SCAP-203ENST00000416208 SUPT5HO00267 1087 aaKnown RBP34.45■■■■□ 3.11
SCAP-203ENST00000416208 OSCARQ8IYS5 282 aa34.4■■■■□ 3.1
SCAP-203ENST00000416208 TARBP1Q13395 1621 aaKnown RBP34.38■■■■□ 3.09
SCAP-203ENST00000416208 POLA1P09884 1462 aaPredicted RBP34.37■■■■□ 3.09
SCAP-203ENST00000416208 EIF4G3O43432 1585 aaKnown RBP34.33■■■■□ 3.09
SCAP-203ENST00000416208 AQRO60306 1485 aaKnown RBP eCLIP34.3■■■■□ 3.084e-7■■■■■ 28.8
SCAP-203ENST00000416208 RAD54L2Q9Y4B4 1467 aa34.28■■■■□ 3.08
SCAP-203ENST00000416208 CUX1P39880 1505 aa34.25■■■■□ 3.07
SCAP-203ENST00000416208 TRIM41Q8WV44 630 aa34.22■■■■□ 3.07
SCAP-203ENST00000416208 SOGA1O94964 1423 aa34.19■■■■□ 3.06
SCAP-203ENST00000416208 FGD5Q6ZNL6 1462 aa34.19■■■■□ 3.06
SCAP-203ENST00000416208 TDRD9Q8NDG6 1382 aaKnown RBP34.13■■■■□ 3.05
SCAP-203ENST00000416208 CHD1O14646 1710 aa34.02■■■■□ 3.04
SCAP-203ENST00000416208 RIMBP3CA6NJZ7 1639 aa33.97■■■■□ 3.03
SCAP-203ENST00000416208 RIMBP3BA6NNM3 1639 aa33.97■■■■□ 3.03
SCAP-203ENST00000416208 RIMBP3Q9UFD9 1639 aa33.97■■■■□ 3.03
SCAP-203ENST00000416208 WDR97A6NE52 1622 aa33.93■■■■□ 3.02
SCAP-203ENST00000416208 FBLN2P98095 1184 aa33.92■■■■□ 3.02
SCAP-203ENST00000416208 SNAPC4Q5SXM2 1469 aa33.91■■■■□ 3.02
SCAP-203ENST00000416208 ARHGEF11O15085 1522 aa33.9■■■■□ 3.02
SCAP-203ENST00000416208 GRIN2BQ13224 1484 aa33.82■■■■□ 3.01
SCAP-203ENST00000416208 ABCA10Q8WWZ4 1543 aa33.8■■■■□ 3
SCAP-203ENST00000416208 MAGI1Q96QZ7 1491 aaPredicted RBP33.77■■■■□ 3
SCAP-203ENST00000416208 GAPVD1Q14C86 1478 aa33.76■■■■□ 3
SCAP-203ENST00000416208 SYNJ1O43426 1573 aa33.76■■■□□ 2.99
SCAP-203ENST00000416208 WRNQ14191 1432 aaPredicted RBP eCLIP33.73■■■□□ 2.99
SCAP-203ENST00000416208 ABCA5Q8WWZ7 1642 aa33.73■■■□□ 2.99
SCAP-203ENST00000416208 TOP2BQ02880 1626 aa33.72■■■□□ 2.99
SCAP-203ENST00000416208 BIVM-ERCC5R4GMW8 1640 aa33.72■■■□□ 2.99
SCAP-203ENST00000416208 PBRM1Q86U86 1689 aa33.71■■■□□ 2.99
SCAP-203ENST00000416208 CHMP7Q8WUX9 453 aaPredicted RBP33.71■■■□□ 2.99
SCAP-203ENST00000416208 SYNJ2O15056 1496 aa33.69■■■□□ 2.98
SCAP-203ENST00000416208 CLASP1Q7Z460 1538 aa33.68■■■□□ 2.98
SCAP-203ENST00000416208 CYB5RLQ6IPT4 315 aa33.63■■■□□ 2.97
SCAP-203ENST00000416208 ARAP1Q96P48 1450 aa33.63■■■□□ 2.97
SCAP-203ENST00000416208 ADAMTS12P58397 1594 aa33.45■■■□□ 2.95
SCAP-203ENST00000416208 GRIN2AQ12879 1464 aa33.41■■■□□ 2.94
SCAP-203ENST00000416208 ERICH3Q5RHP9 1530 aa33.35■■■□□ 2.93
SCAP-203ENST00000416208 FHAD1B1AJZ9 1412 aa33.34■■■□□ 2.93
SCAP-203ENST00000416208 CEP170Q5SW79 1584 aa33.33■■■□□ 2.93
SCAP-203ENST00000416208 NUP160Q12769 1436 aa33.32■■■□□ 2.92
SCAP-203ENST00000416208 ERCC6L2Q5T890 1561 aa33.26■■■□□ 2.91
SCAP-203ENST00000416208 SHROOM2Q13796 1616 aa33.13■■■□□ 2.89
SCAP-203ENST00000416208 IGF1RP08069 1367 aa33.1■■■□□ 2.89
SCAP-203ENST00000416208 TRHP20396 242 aaPredicted RBP33.07■■■□□ 2.88
SCAP-203ENST00000416208 KIF27Q86VH2 1401 aa33.03■■■□□ 2.88
SCAP-203ENST00000416208 JPH4Q96JJ6 628 aa32.97■■■□□ 2.87
SCAP-203ENST00000416208 RUSC2Q8N2Y8 1516 aa32.97■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms