RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 NISCHQ9Y2I1 1504 aa29■■■□□ 2.23
SCAP-202ENST00000320017 DCAF8L2P0C7V8 631 aa25.57■■□□□ 1.68
SCAP-202ENST00000320017 SHROOM4Q9ULL8 1493 aa25.48■■□□□ 1.67
SCAP-202ENST00000320017 HRCP23327 699 aa25.29■■□□□ 1.64
SCAP-202ENST00000320017 SUPT5HO00267 1087 aaKnown RBP25.21■■□□□ 1.63
SCAP-202ENST00000320017 PELP1Q8IZL8 1130 aaKnown RBP25.15■■□□□ 1.62
SCAP-202ENST00000320017 PPARGC1BQ86YN6 1023 aaKnown RBP25.05■■□□□ 1.6
SCAP-202ENST00000320017 PCGF6Q9BYE7 350 aa24.85■■□□□ 1.57
SCAP-202ENST00000320017 CCDC180Q9P1Z9 1646 aa24.45■■□□□ 1.5
SCAP-202ENST00000320017 ZCCHC6Q5VYS8 1495 aaKnown RBP24.31■■□□□ 1.48
SCAP-202ENST00000320017 SCAF1Q9H7N4 1312 aaKnown RBP24.29■■□□□ 1.48
SCAP-202ENST00000320017 MYT1Q01538 1121 aa24.29■■□□□ 1.48
SCAP-202ENST00000320017 ABCC9O60706 1549 aa24.1■■□□□ 1.45
SCAP-202ENST00000320017 CHIC1Q5VXU3 224 aa24.04■■□□□ 1.44
SCAP-202ENST00000320017 MYO15BQ96JP2 1530 aa23.9■■□□□ 1.42
SCAP-202ENST00000320017 LOC105371045A0A1W2PR82 267 aa23.86■■□□□ 1.41
SCAP-202ENST00000320017 EHMT2Q96KQ7 1210 aa23.79■■□□□ 1.4
SCAP-202ENST00000320017 TRIM26Q12899 539 aaPredicted RBP23.61■■□□□ 1.37
SCAP-202ENST00000320017 ZEB1P37275 1124 aaPredicted RBP23.56■■□□□ 1.36
SCAP-202ENST00000320017 GTF3C3Q9Y5Q9 886 aa23.54■■□□□ 1.36
SCAP-202ENST00000320017 ACIN1Q9UKV3 1341 aaKnown RBP23.53■■□□□ 1.36
SCAP-202ENST00000320017 SCRIBQ14160 1630 aa23.52■■□□□ 1.36
SCAP-202ENST00000320017 NEUROD1Q13562 356 aa23.51■■□□□ 1.35
SCAP-202ENST00000320017 FAM9AQ8IZU1 332 aaPredicted RBP23.5■■□□□ 1.35
SCAP-202ENST00000320017 DCAF1Q9Y4B6 1507 aa23.39■■□□□ 1.33
SCAP-202ENST00000320017 CENPBP07199 599 aaPredicted RBP23.33■■□□□ 1.32
SCAP-202ENST00000320017 PABPN1Q86U42 306 aaKnown RBP eCLIP23.26■■□□□ 1.31
SCAP-202ENST00000320017 TRIM41Q8WV44 630 aa23.08■■□□□ 1.29
SCAP-202ENST00000320017 YTHDC1Q96MU7 727 aaKnown RBP23.02■■□□□ 1.28
SCAP-202ENST00000320017 NACADO15069 1562 aa23.01■■□□□ 1.27
SCAP-202ENST00000320017 TTBK1Q5TCY1 1321 aaPredicted RBP22.99■■□□□ 1.27
SCAP-202ENST00000320017 DIEXFQ68CQ4 756 aaKnown RBP22.96■■□□□ 1.27
SCAP-202ENST00000320017 CECR2Q9BXF3 1484 aa22.94■■□□□ 1.26
SCAP-202ENST00000320017 RSF1Q96T23 1441 aaPredicted RBP22.93■■□□□ 1.26
SCAP-202ENST00000320017 BCL11AQ9H165 835 aa22.89■■□□□ 1.25
SCAP-202ENST00000320017 RB1CC1Q8TDY2 1594 aa22.88■■□□□ 1.25
SCAP-202ENST00000320017 CCER1Q8TC90 406 aaPredicted RBP22.86■■□□□ 1.25
SCAP-202ENST00000320017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.84■■□□□ 1.25
SCAP-202ENST00000320017 MROH2BQ7Z745 1585 aa22.67■■□□□ 1.22
SCAP-202ENST00000320017 ANP32EQ9BTT0 268 aa22.48■■□□□ 1.19
SCAP-202ENST00000320017 WIZO95785 1651 aa22.45■■□□□ 1.18
SCAP-202ENST00000320017 CSRNP3Q8WYN3 585 aa22.35■■□□□ 1.17
SCAP-202ENST00000320017 BAZ1AQ9NRL2 1556 aaPredicted RBP22.31■■□□□ 1.16
SCAP-202ENST00000320017 MIER1Q8N108 512 aa22.29■■□□□ 1.16
SCAP-202ENST00000320017 ZNF316A6NFI3 1004 aaPredicted RBP22.28■■□□□ 1.16
SCAP-202ENST00000320017 PRKCSHP14314 528 aaPredicted RBP22.28■■□□□ 1.16
SCAP-202ENST00000320017 RANGAP1P46060 587 aaPredicted RBP22.27■■□□□ 1.16
SCAP-202ENST00000320017 UNC13AQ9UPW8 1703 aa22.17■■□□□ 1.14
SCAP-202ENST00000320017 TSHZ2Q9NRE2 1034 aa22.16■■□□□ 1.14
SCAP-202ENST00000320017 UBTFP17480 764 aaKnown RBP22.15■■□□□ 1.14
SCAP-202ENST00000320017 BICRAQ9NZM4 1560 aa22.12■■□□□ 1.13
SCAP-202ENST00000320017 SMARCA4P51532 1647 aa22.12■■□□□ 1.13
SCAP-202ENST00000320017 SUPT16HQ9Y5B9 1047 aaKnown RBP22.12■■□□□ 1.13
SCAP-202ENST00000320017 CCDC88BA6NC98 1476 aa22.09■■□□□ 1.13
SCAP-202ENST00000320017 BCANQ96GW7 911 aa22.02■■□□□ 1.12
SCAP-202ENST00000320017 HNRNPUL2Q1KMD3 747 aaKnown RBP22■■□□□ 1.11
SCAP-202ENST00000320017 ABCC8Q09428 1581 aa21.98■■□□□ 1.11
SCAP-202ENST00000320017 TOP2AP11388 1531 aaKnown RBP21.95■■□□□ 1.1
SCAP-202ENST00000320017 BAZ1BQ9UIG0 1483 aaKnown RBP21.93■■□□□ 1.1
SCAP-202ENST00000320017 ATAD2BQ9ULI0 1458 aa21.88■■□□□ 1.09
SCAP-202ENST00000320017 SMARCA2P51531 1590 aa21.84■■□□□ 1.09
SCAP-202ENST00000320017 CLSPNQ9HAW4 1339 aa21.79■■□□□ 1.08
SCAP-202ENST00000320017 SOGA1O94964 1423 aa21.78■■□□□ 1.08
SCAP-202ENST00000320017 ERICH6Q7L0X2 663 aa21.75■■□□□ 1.07
SCAP-202ENST00000320017 WRNQ14191 1432 aaPredicted RBP eCLIP21.68■■□□□ 1.06
SCAP-202ENST00000320017 CEP162Q5TB80 1403 aa21.68■■□□□ 1.06
SCAP-202ENST00000320017 RUSC2Q8N2Y8 1516 aa21.67■■□□□ 1.06
SCAP-202ENST00000320017 RBM19Q9Y4C8 960 aaKnown RBP21.64■■□□□ 1.05
SCAP-202ENST00000320017 FKBP8Q14318 412 aa21.64■■□□□ 1.05
SCAP-202ENST00000320017 APLP2Q06481 763 aa21.62■■□□□ 1.05
SCAP-202ENST00000320017 EIF4G1Q04637 1599 aaKnown RBP21.62■■□□□ 1.05
SCAP-202ENST00000320017 ITGAEP38570 1179 aa21.58■■□□□ 1.04
SCAP-202ENST00000320017 NEFLP07196 543 aa21.52■■□□□ 1.04
SCAP-202ENST00000320017 ANO8Q9HCE9 1232 aaPredicted RBP21.49■■□□□ 1.03
SCAP-202ENST00000320017 DNAJC5BQ9UF47 199 aa21.48■■□□□ 1.03
SCAP-202ENST00000320017 NCAPD3P42695 1498 aa21.42■■□□□ 1.02
SCAP-202ENST00000320017 MSH5O43196 834 aa21.41■■□□□ 1.02
SCAP-202ENST00000320017 PEG3Q9GZU2 1588 aa21.41■■□□□ 1.02
SCAP-202ENST00000320017 TNIKQ9UKE5 1360 aa21.41■■□□□ 1.02
SCAP-202ENST00000320017 KCNH8Q96L42 1107 aa21.37■■□□□ 1.01
SCAP-202ENST00000320017 DEKP35659 375 aaKnown RBP21.36■■□□□ 1.01
SCAP-202ENST00000320017 SYNJ1O43426 1573 aa21.35■■□□□ 1.01
SCAP-202ENST00000320017 ATP1B4Q9UN42 357 aaPredicted RBP21.32■■□□□ 1
SCAP-202ENST00000320017 CCDC136Q96JN2 1154 aa21.3■■□□□ 1
SCAP-202ENST00000320017 CC2D2AQ9P2K1 1620 aa21.26■□□□□ 0.99
SCAP-202ENST00000320017 CLIP1P30622 1438 aa21.25■□□□□ 0.99
SCAP-202ENST00000320017 CADPSQ9ULU8 1353 aa21.23■□□□□ 0.99
SCAP-202ENST00000320017 GOLGA3Q08378 1498 aa21.23■□□□□ 0.99
SCAP-202ENST00000320017 NBR1Q14596 966 aa21.23■□□□□ 0.99
SCAP-202ENST00000320017 P3H3Q8IVL6 736 aa21.22■□□□□ 0.99
SCAP-202ENST00000320017 SALL2Q9Y467 1007 aaPredicted RBP21.22■□□□□ 0.99
SCAP-202ENST00000320017 EEA1Q15075 1411 aa21.21■□□□□ 0.99
SCAP-202ENST00000320017 HMGXB3Q12766 1538 aa21.19■□□□□ 0.98
SCAP-202ENST00000320017 TRIM52Q96A61 297 aa21.18■□□□□ 0.98
SCAP-202ENST00000320017 RAPGEF2Q9Y4G8 1499 aa21.18■□□□□ 0.98
SCAP-202ENST00000320017 NESP48681 1621 aa21.17■□□□□ 0.98
SCAP-202ENST00000320017 CDK11AQ9UQ88 783 aaPredicted RBP21.16■□□□□ 0.98
SCAP-202ENST00000320017 KANK4Q5T7N3 995 aaPredicted RBP21.15■□□□□ 0.98
SCAP-202ENST00000320017 RTN4Q9NQC3 1192 aaKnown RBP21.15■□□□□ 0.98
SCAP-202ENST00000320017 CFTRP13569 1480 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms