RNA–Protein interactions for RNA: ENST00000305544.8

LAMB2-201, Transcript of laminin subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMB2, Length 5,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB2-201ENST00000305544 DCAF8L2P0C7V8 631 aa23.79■■□□□ 1.4
LAMB2-201ENST00000305544 NISCHQ9Y2I1 1504 aa22.82■■□□□ 1.24
LAMB2-201ENST00000305544 SUPT5HO00267 1087 aaKnown RBP22.8■■□□□ 1.24
LAMB2-201ENST00000305544 SHROOM4Q9ULL8 1493 aa22.47■■□□□ 1.19
LAMB2-201ENST00000305544 EHMT2Q96KQ7 1210 aa22.15■■□□□ 1.14
LAMB2-201ENST00000305544 FAM9AQ8IZU1 332 aaPredicted RBP21.52■■□□□ 1.04
LAMB2-201ENST00000305544 TTBK1Q5TCY1 1321 aaPredicted RBP21.4■■□□□ 1.02
LAMB2-201ENST00000305544 PCGF6Q9BYE7 350 aa21.4■■□□□ 1.02
LAMB2-201ENST00000305544 APLP2Q06481 763 aa21.33■■□□□ 1.01
LAMB2-201ENST00000305544 PELP1Q8IZL8 1130 aaKnown RBP21.13■□□□□ 0.97
LAMB2-201ENST00000305544 RANGAP1P46060 587 aaPredicted RBP21.08■□□□□ 0.97
LAMB2-201ENST00000305544 TRIM41Q8WV44 630 aa21■□□□□ 0.95
LAMB2-201ENST00000305544 CCER1Q8TC90 406 aaPredicted RBP20.86■□□□□ 0.93
LAMB2-201ENST00000305544 ZEB1P37275 1124 aaPredicted RBP20.74■□□□□ 0.91
LAMB2-201ENST00000305544 ATP1B4Q9UN42 357 aaPredicted RBP20.74■□□□□ 0.91
LAMB2-201ENST00000305544 UBTFP17480 764 aaKnown RBP20.72■□□□□ 0.91
LAMB2-201ENST00000305544 PPARGC1BQ86YN6 1023 aaKnown RBP20.7■□□□□ 0.9
LAMB2-201ENST00000305544 CENPBP07199 599 aaPredicted RBP20.68■□□□□ 0.9
LAMB2-201ENST00000305544 YTHDC1Q96MU7 727 aaKnown RBP20.53■□□□□ 0.88
LAMB2-201ENST00000305544 LOC105371045A0A1W2PR82 267 aa20.39■□□□□ 0.85
LAMB2-201ENST00000305544 ERICH6Q7L0X2 663 aa20.39■□□□□ 0.85
LAMB2-201ENST00000305544 TRIM26Q12899 539 aaPredicted RBP20.37■□□□□ 0.85
LAMB2-201ENST00000305544 CHIC1Q5VXU3 224 aa20.27■□□□□ 0.84
LAMB2-201ENST00000305544 HRCP23327 699 aa20.26■□□□□ 0.83
LAMB2-201ENST00000305544 NEFLP07196 543 aa20.18■□□□□ 0.82
LAMB2-201ENST00000305544 ITGAEP38570 1179 aa20.17■□□□□ 0.82
LAMB2-201ENST00000305544 HNRNPUL2Q1KMD3 747 aaKnown RBP20.07■□□□□ 0.8
LAMB2-201ENST00000305544 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.92■□□□□ 0.78
LAMB2-201ENST00000305544 POLR3GLQ9BT43 218 aa19.91■□□□□ 0.78
LAMB2-201ENST00000305544 CNGB1Q14028 1251 aaPredicted RBP19.85■□□□□ 0.77
LAMB2-201ENST00000305544 MYT1LQ9UL68 1186 aa19.76■□□□□ 0.75
LAMB2-201ENST00000305544 DIEXFQ68CQ4 756 aaKnown RBP19.7■□□□□ 0.74
LAMB2-201ENST00000305544 PABPN1Q86U42 306 aaKnown RBP eCLIP19.67■□□□□ 0.741e-7■■■□□ 16.5
LAMB2-201ENST00000305544 MYT1Q01538 1121 aa19.64■□□□□ 0.74
LAMB2-201ENST00000305544 ABCC9O60706 1549 aa19.62■□□□□ 0.73
LAMB2-201ENST00000305544 FAM50AQ14320 339 aaKnown RBP19.59■□□□□ 0.73
LAMB2-201ENST00000305544 DAXXQ9UER7 740 aaPredicted RBP19.51■□□□□ 0.71
LAMB2-201ENST00000305544 NEUROD1Q13562 356 aa19.5■□□□□ 0.71
LAMB2-201ENST00000305544 TRIM52Q96A61 297 aa19.43■□□□□ 0.7
LAMB2-201ENST00000305544 SLC4A1APQ9BWU0 796 aaKnown RBP19.42■□□□□ 0.7
LAMB2-201ENST00000305544 BCANQ96GW7 911 aa19.36■□□□□ 0.69
LAMB2-201ENST00000305544 GTF3C3Q9Y5Q9 886 aa19.36■□□□□ 0.69
LAMB2-201ENST00000305544 ZNF326Q5BKZ1 582 aaKnown RBP19.26■□□□□ 0.67
LAMB2-201ENST00000305544 ZNF316A6NFI3 1004 aaPredicted RBP19.22■□□□□ 0.67
LAMB2-201ENST00000305544 P3H3Q8IVL6 736 aa19.22■□□□□ 0.67
LAMB2-201ENST00000305544 CLSPNQ9HAW4 1339 aa19.2■□□□□ 0.66
LAMB2-201ENST00000305544 ANP32CO43423 234 aa19.18■□□□□ 0.66
LAMB2-201ENST00000305544 ARID3CA6NKF2 412 aa19.16■□□□□ 0.66
LAMB2-201ENST00000305544 CSRNP3Q8WYN3 585 aa19.16■□□□□ 0.66
LAMB2-201ENST00000305544 FBLN2P98095 1184 aa19.14■□□□□ 0.66
LAMB2-201ENST00000305544 RTL5Q5HYW3 569 aaPredicted RBP19.12■□□□□ 0.65
LAMB2-201ENST00000305544 ACIN1Q9UKV3 1341 aaKnown RBP19.04■□□□□ 0.64
LAMB2-201ENST00000305544 SCRIBQ14160 1630 aa19■□□□□ 0.63
LAMB2-201ENST00000305544 CDK11AQ9UQ88 783 aaPredicted RBP18.98■□□□□ 0.63
LAMB2-201ENST00000305544 ZNF777Q9ULD5 760 aaPredicted RBP18.93■□□□□ 0.62
LAMB2-201ENST00000305544 ZCCHC6Q5VYS8 1495 aaKnown RBP18.9■□□□□ 0.62
LAMB2-201ENST00000305544 BCL11AQ9H165 835 aa18.86■□□□□ 0.61
LAMB2-201ENST00000305544 DCAF1Q9Y4B6 1507 aa18.84■□□□□ 0.61
LAMB2-201ENST00000305544 CANXP27824 592 aaKnown RBP18.8■□□□□ 0.6
LAMB2-201ENST00000305544 DDX10Q13206 875 aaKnown RBP18.76■□□□□ 0.59
LAMB2-201ENST00000305544 FKBP8Q14318 412 aa18.76■□□□□ 0.59
LAMB2-201ENST00000305544 TONSLQ96HA7 1378 aa18.73■□□□□ 0.59
LAMB2-201ENST00000305544 SLC24A1O60721 1099 aa18.72■□□□□ 0.59
LAMB2-201ENST00000305544 ZBTB47Q9UFB7 747 aaPredicted RBP18.71■□□□□ 0.59
LAMB2-201ENST00000305544 NPM2Q86SE8 214 aaKnown RBP18.7■□□□□ 0.58
LAMB2-201ENST00000305544 MYO15BQ96JP2 1530 aa18.7■□□□□ 0.58
LAMB2-201ENST00000305544 CHIC2Q9UKJ5 165 aa18.69■□□□□ 0.58
LAMB2-201ENST00000305544 HNRNPUQ00839 825 aaKnown RBP eCLIP18.68■□□□□ 0.58
LAMB2-201ENST00000305544 FAM9BQ8IZU0 186 aa18.67■□□□□ 0.58
LAMB2-201ENST00000305544 ANP32AP39687 249 aaKnown RBP18.63■□□□□ 0.57
LAMB2-201ENST00000305544 SALL2Q9Y467 1007 aaPredicted RBP18.62■□□□□ 0.57
LAMB2-201ENST00000305544 HIRIP3Q9BW71 556 aaPredicted RBP18.6■□□□□ 0.57
LAMB2-201ENST00000305544 NEFMP07197 916 aa18.59■□□□□ 0.57
LAMB2-201ENST00000305544 MIER1Q8N108 512 aa18.58■□□□□ 0.57
LAMB2-201ENST00000305544 CHGAP10645 457 aaKnown RBP18.57■□□□□ 0.56
LAMB2-201ENST00000305544 SCAF1Q9H7N4 1312 aaKnown RBP18.54■□□□□ 0.56
LAMB2-201ENST00000305544 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.52■□□□□ 0.565e-7■□□□□ 9.3
LAMB2-201ENST00000305544 CLIP1P30622 1438 aa18.51■□□□□ 0.55
LAMB2-201ENST00000305544 CCDC180Q9P1Z9 1646 aa18.49■□□□□ 0.55
LAMB2-201ENST00000305544 KDM2AQ9Y2K7 1162 aa18.48■□□□□ 0.55
LAMB2-201ENST00000305544 IRX6P78412 446 aaPredicted RBP18.47■□□□□ 0.55
LAMB2-201ENST00000305544 TMC1Q8TDI8 760 aa18.44■□□□□ 0.54
LAMB2-201ENST00000305544 MTUS2Q5JR59 1369 aa18.44■□□□□ 0.54
LAMB2-201ENST00000305544 RSF1Q96T23 1441 aaPredicted RBP18.44■□□□□ 0.54
LAMB2-201ENST00000305544 MRS2Q9HD23 443 aa18.43■□□□□ 0.54
LAMB2-201ENST00000305544 PLPPR3Q6T4P5 718 aa18.41■□□□□ 0.54
LAMB2-201ENST00000305544 RRP7BPQ9NSQ0 103 aa18.41■□□□□ 0.54
LAMB2-201ENST00000305544 CEP162Q5TB80 1403 aa18.41■□□□□ 0.54
LAMB2-201ENST00000305544 STAG3Q9UJ98 1225 aa18.4■□□□□ 0.54
LAMB2-201ENST00000305544 CCDC136Q96JN2 1154 aa18.39■□□□□ 0.53
LAMB2-201ENST00000305544 ESF1Q9H501 851 aaKnown RBP18.35■□□□□ 0.53
LAMB2-201ENST00000305544 TSPY4P0CV99 314 aa18.34■□□□□ 0.53
LAMB2-201ENST00000305544 TSPY10P0CW01 314 aa18.34■□□□□ 0.53
LAMB2-201ENST00000305544 NBR1Q14596 966 aa18.33■□□□□ 0.52
LAMB2-201ENST00000305544 GOLGA3Q08378 1498 aa18.33■□□□□ 0.52
LAMB2-201ENST00000305544 SENP3-EIF4A1A0A087X0R7 540 aa18.32■□□□□ 0.52
LAMB2-201ENST00000305544 HSP90AA1P07900 732 aaKnown RBP18.29■□□□□ 0.52
LAMB2-201ENST00000305544 SENP3Q9H4L4 574 aaPredicted RBP18.29■□□□□ 0.52
LAMB2-201ENST00000305544 WDR43Q15061 677 aaKnown RBP eCLIP18.29■□□□□ 0.521e-5■■■■□ 24.6
LAMB2-201ENST00000305544 CHMP7Q8WUX9 453 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms